RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 BAG4O95429 457 aaKnown RBP16.91■□□□□ 0.3
LIG1-214ENST00000597146 MAPK8P45983 427 aa16.91■□□□□ 0.3
LIG1-214ENST00000597146 DGKEP52429 567 aa16.91■□□□□ 0.3
LIG1-214ENST00000597146 YARSP54577 528 aaKnown RBP16.91■□□□□ 0.3
LIG1-214ENST00000597146 SIM1P81133 766 aaPredicted RBP16.91■□□□□ 0.3
LIG1-214ENST00000597146 DMC1Q14565 340 aa16.91■□□□□ 0.3
LIG1-214ENST00000597146 ALKAL1Q6UXT8 129 aa16.91■□□□□ 0.3
LIG1-214ENST00000597146 CDT1Q9H211 546 aa16.91■□□□□ 0.3
LIG1-214ENST00000597146 TOPORSQ9NS56 1045 aaPredicted RBP16.91■□□□□ 0.3
LIG1-214ENST00000597146 GKN1Q9NS71 199 aa16.91■□□□□ 0.3
LIG1-214ENST00000597146 GJB4Q9NTQ9 266 aa16.91■□□□□ 0.3
LIG1-214ENST00000597146 EBF1Q9UH73 591 aa16.91■□□□□ 0.3
LIG1-214ENST00000597146 SLC27A5Q9Y2P5 690 aa16.91■□□□□ 0.3
LIG1-214ENST00000597146 TIMM13Q9Y5L4 95 aaPredicted RBP16.91■□□□□ 0.3
LIG1-214ENST00000597146 CEP192Q8TEP8 1941 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 PLXNB3Q9ULL4 1909 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 SEC24BO95487 1268 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 GRM5P41594 1212 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 NAMPTP43490 491 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 SCRN1Q12765 414 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 RUNX3Q13761 415 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 ARHGAP15Q53QZ3 475 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 SYT13Q7L8C5 426 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 CHCHD4Q8N4Q1 142 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 APPL2Q8NEU8 664 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 PIGKQ92643 395 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 EZH1Q92800 747 aaPredicted RBP16.9■□□□□ 0.3
LIG1-214ENST00000597146 FAM83CQ9BQN1 747 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 CCDC94Q9BW85 323 aaPredicted RBP16.9■□□□□ 0.3
LIG1-214ENST00000597146 SLC32A1Q9H598 525 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 UPF2Q9HAU5 1272 aaKnown RBP16.9■□□□□ 0.3
LIG1-214ENST00000597146 POLD4Q9HCU8 107 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 ORC3Q9UBD5 711 aaPredicted RBP16.9■□□□□ 0.3
LIG1-214ENST00000597146 PCDHB8Q9UN66 801 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 PCDHA12Q9UN75 941 aa16.9■□□□□ 0.3
LIG1-214ENST00000597146 DTNBO60941 627 aa16.89■□□□□ 0.29
LIG1-214ENST00000597146 ARSAP15289 507 aa16.89■□□□□ 0.29
LIG1-214ENST00000597146 ALDH1A3P47895 512 aa16.89■□□□□ 0.29
LIG1-214ENST00000597146 DHPSP49366 369 aaPredicted RBP16.89■□□□□ 0.29
LIG1-214ENST00000597146 PTPAQ15257 358 aa16.89■□□□□ 0.29
LIG1-214ENST00000597146 DNAJB7Q7Z6W7 309 aaPredicted RBP16.89■□□□□ 0.29
LIG1-214ENST00000597146 NECAB1Q8N987 351 aa16.89■□□□□ 0.29
LIG1-214ENST00000597146 PSMG2Q969U7 264 aa16.89■□□□□ 0.29
LIG1-214ENST00000597146 NAP1L4Q99733 375 aaKnown RBP16.89■□□□□ 0.29
LIG1-214ENST00000597146 TASP1Q9H6P5 420 aa16.89■□□□□ 0.29
LIG1-214ENST00000597146 TTC12Q9H892 705 aaPredicted RBP16.89■□□□□ 0.29
LIG1-214ENST00000597146 THG1LQ9NWX6 298 aaKnown RBP16.89■□□□□ 0.29
LIG1-214ENST00000597146 TUBGCP4Q9UGJ1 667 aa16.89■□□□□ 0.29
LIG1-214ENST00000597146 CCL26Q9Y258 94 aa16.89■□□□□ 0.29
LIG1-214ENST00000597146 TENM4Q6N022 2769 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 SPATA31C1P0DKV0 1188 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 KCNE1P15382 129 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 RPL9P32969 192 aaKnown RBP16.88■□□□□ 0.29
LIG1-214ENST00000597146 GALK1P51570 392 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 CDR1P51861 262 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 FAM193AP78312 1265 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 YWHAHQ04917 246 aaPredicted RBP16.88■□□□□ 0.29
LIG1-214ENST00000597146 TRIM29Q14134 588 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 ZNF568Q3ZCX4 644 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 TRIM61Q5EBN2 209 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 FAM177A1Q8N128 213 aaPredicted RBP16.88■□□□□ 0.29
LIG1-214ENST00000597146 ATAD1Q8NBU5 361 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 RIN3Q8TB24 985 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 LPIN3Q9BQK8 851 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 BRMS1Q9HCU9 246 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 PLXND1Q9Y4D7 1925 aa16.88■□□□□ 0.29
LIG1-214ENST00000597146 KALRNO60229 2985 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 NAV2Q8IVL1 2488 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 MTMR11A4FU01 709 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 XRCC6P12956 609 aaKnown RBP eCLIP16.87■□□□□ 0.29
LIG1-214ENST00000597146 DRD1P21728 446 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 WEE1P30291 646 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 TXKP42681 527 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 SCAPQ12770 1279 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 PSMD2Q13200 908 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 CALCRLQ16602 461 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 CENPPQ6IPU0 288 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 PADI6Q6TGC4 694 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 ARMCX6Q7L4S7 300 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 PIP4P1Q86T03 277 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 TSTD1Q8NFU3 115 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 P2RY13Q9BPV8 354 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 SLC46A2Q9BY10 475 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 IL21Q9HBE4 155 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 CNTN3Q9P232 1028 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 EVLQ9UI08 416 aaPredicted RBP16.87■□□□□ 0.29
LIG1-214ENST00000597146 TNFSF13BQ9Y275 285 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 PCDH15Q96QU1 1955 aa16.87■□□□□ 0.29
LIG1-214ENST00000597146 ATXN2Q99700 1313 aaKnown RBP16.87■□□□□ 0.29
LIG1-214ENST00000597146 FAM221BA6H8Z2 402 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 WNT7AO00755 349 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 MED24O75448 989 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 OAZ2O95190 189 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 FGF19O95750 216 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 ENGP17813 658 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 MARCKSP29966 332 aaPredicted RBP16.86■□□□□ 0.29
LIG1-214ENST00000597146 GPR17Q13304 367 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 USP39Q53GS9 565 aaKnown RBP16.86■□□□□ 0.29
LIG1-214ENST00000597146 ANO7Q6IWH7 933 aa16.86■□□□□ 0.29
LIG1-214ENST00000597146 APBB1IPQ7Z5R6 666 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms