RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 PYM1Q9BRP8 204 aaKnown RBP19.58■□□□□ 0.72
CHD3-214ENST00000572579 OSBPL6Q9BZF3 934 aa19.58■□□□□ 0.72
CHD3-214ENST00000572579 PANK4Q9NVE7 773 aa19.58■□□□□ 0.72
CHD3-214ENST00000572579 TMLHEQ9NVH6 421 aa19.58■□□□□ 0.72
CHD3-214ENST00000572579 ATF6P18850 670 aa19.57■□□□□ 0.72
CHD3-214ENST00000572579 SLC39A12Q504Y0 691 aa19.57■□□□□ 0.72
CHD3-214ENST00000572579 SHC4Q6S5L8 630 aa19.57■□□□□ 0.72
CHD3-214ENST00000572579 ADSSL1Q8N142 457 aa19.57■□□□□ 0.72
CHD3-214ENST00000572579 ELMOD1Q8N336 334 aa19.57■□□□□ 0.72
CHD3-214ENST00000572579 C1orf127Q8N9H9 656 aa19.57■□□□□ 0.72
CHD3-214ENST00000572579 TRMT61BQ9BVS5 477 aaKnown RBP19.57■□□□□ 0.72
CHD3-214ENST00000572579 PCIF1Q9H4Z3 704 aa19.57■□□□□ 0.72
CHD3-214ENST00000572579 IL21Q9HBE4 155 aa19.57■□□□□ 0.72
CHD3-214ENST00000572579 SCN1AP35498 2009 aa19.57■□□□□ 0.72
CHD3-214ENST00000572579 HEPACAM2A8MVW5 462 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 KPNA7A9QM74 516 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 PAX3P23760 479 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 GDI1P31150 447 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 TXLNAP40222 546 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 TAF6P49848 677 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 EPHB3P54753 998 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 FOXD4L5Q5VV16 416 aaPredicted RBP19.56■□□□□ 0.72
CHD3-214ENST00000572579 BRSK2Q8IWQ3 736 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 LEMD2Q8NC56 503 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 FOXD4L4Q8WXT5 416 aaPredicted RBP19.56■□□□□ 0.72
CHD3-214ENST00000572579 SNX21Q969T3 373 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 PSMG2Q969U7 264 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 KBTBD4Q9NVX7 518 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 SIX4Q9UIU6 781 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 PCDHB13Q9Y5F0 798 aa19.56■□□□□ 0.72
CHD3-214ENST00000572579 SPTLC2O15270 562 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 IL18RAPO95256 599 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 PSMC3P17980 439 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 GARTP22102 1010 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 ALDH1A3P47895 512 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 TFAMQ00059 246 aaKnown RBP19.55■□□□□ 0.72
CHD3-214ENST00000572579 WDR44Q5JSH3 913 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 ARMCX5Q6P1M9 558 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 TMEM150AQ86TG1 271 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 MFSD6LQ8IWD5 586 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 DNASE1L2Q92874 299 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 BRD9Q9H8M2 597 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 PDE11AQ9HCR9 933 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 TRPV5Q9NQA5 729 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 HSFX1Q9UBD0 423 aa19.55■□□□□ 0.72
CHD3-214ENST00000572579 PTPRJQ12913 1337 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 HCRTO43612 131 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 POLR2BP30876 1174 aaKnown RBP19.54■□□□□ 0.72
CHD3-214ENST00000572579 PKP1Q13835 747 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 STK38Q15208 465 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 CCDC142Q17RM4 750 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 ZNF852Q6ZMS4 543 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 OSTM1Q86WC4 334 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 ARID3BQ8IVW6 561 aaPredicted RBP19.54■□□□□ 0.72
CHD3-214ENST00000572579 PDCL2Q8N4E4 241 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 BCO2Q9BYV7 579 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 TRIM9Q9C026 710 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 SPATA6Q9NWH7 488 aaPredicted RBP19.54■□□□□ 0.72
CHD3-214ENST00000572579 RBAKQ9NYW8 714 aaPredicted RBP19.54■□□□□ 0.72
CHD3-214ENST00000572579 AGAP1Q9UPQ3 857 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 EXOC7Q9UPT5 735 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 ZNF292O60281 2723 aa19.54■□□□□ 0.72
CHD3-214ENST00000572579 SPTBN4Q9H254 2564 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 EXTL3O43909 919 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 PPP6R2O75170 966 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 ITGB3P05106 788 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 HAPLN1P10915 354 aaPredicted RBP19.53■□□□□ 0.72
CHD3-214ENST00000572579 CASP1P29466 404 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 GPR15P49685 360 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 PLD1Q13393 1074 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 LMBRD2Q68DH5 695 aaPredicted RBP19.53■□□□□ 0.72
CHD3-214ENST00000572579 EPM2AIP1Q7L775 607 aaPredicted RBP19.53■□□□□ 0.72
CHD3-214ENST00000572579 NT5DC4Q86YG4 428 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 STKLD1Q8NE28 680 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 OR5B17Q8NGF7 314 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 GIPC2Q8TF65 315 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 PKMYT1Q99640 499 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 SEPT5Q99719 369 aaPredicted RBP19.53■□□□□ 0.72
CHD3-214ENST00000572579 DSEQ9UL01 958 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 L1RE1Q9UN81 338 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 ASB3Q9Y575 518 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 ANK1P16157 1881 aa19.53■□□□□ 0.72
CHD3-214ENST00000572579 PRAMEF12O95522 483 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 HMGA1P17096 107 aaKnown RBP19.52■□□□□ 0.72
CHD3-214ENST00000572579 GABRR2P28476 465 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 CYP4F8P98187 520 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 FCHO2Q0JRZ9 810 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 MTAPQ13126 283 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 FOXD4L6Q3SYB3 417 aaPredicted RBP19.52■□□□□ 0.72
CHD3-214ENST00000572579 MGAT5BQ3V5L5 792 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 TSSK4Q6SA08 328 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 FOXD4L3Q6VB84 417 aaPredicted RBP19.52■□□□□ 0.72
CHD3-214ENST00000572579 CBWD2Q8IUF1 395 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 SYCP3Q8IZU3 236 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 CSGALNACT2Q8N6G5 542 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 DEPDC1BQ8WUY9 529 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 NELL1Q92832 810 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 IRF7Q92985 503 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 NELL2Q99435 816 aa19.52■□□□□ 0.72
CHD3-214ENST00000572579 SLC46A2Q9BY10 475 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms