RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 NOP14P78316 857 aaKnown RBP14.97□□□□□ -0.01
SRP54-202ENST00000546080 NFX1Q12986 1120 aaKnown RBP14.97□□□□□ -0.01
SRP54-202ENST00000546080 FOXB2Q5VYV0 432 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 RINLQ6ZS11 566 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 ZNF677Q86XU0 584 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 ANKMY2Q8IV38 441 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 OGFOD1Q8N543 542 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 ALLCQ8N6M5 410 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 TCP10LQ8TDR4 215 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 TIPINQ9BVW5 301 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 MMADHCQ9H3L0 296 aaPredicted RBP14.97□□□□□ -0.01
SRP54-202ENST00000546080 SIPA1L1O43166 1804 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 NDC80O14777 642 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 ESRRAP11474 423 aaPredicted RBP14.97□□□□□ -0.01
SRP54-202ENST00000546080 KRT10P13645 584 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 ATF7P17544 494 aaPredicted RBP14.97□□□□□ -0.01
SRP54-202ENST00000546080 SERPINB3P29508 390 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 PHBP35232 272 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 CDK16Q00536 496 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 CCDC142Q17RM4 750 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 NBPF20Q3BBV1 942 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 MON1BQ7L1V2 547 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 ARHGAP24Q8N264 748 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 PDCD7Q8N8D1 485 aaKnown RBP14.97□□□□□ -0.01
SRP54-202ENST00000546080 WDR60Q8WVS4 1066 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 GBP5Q96PP8 586 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 C11orf70Q9BRQ4 267 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 PI4K2AQ9BTU6 479 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 TSSK1BQ9BXA7 367 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 ST6GALNAC4Q9H4F1 302 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 MRPL47Q9HD33 250 aaKnown RBP14.97□□□□□ -0.01
SRP54-202ENST00000546080 PKD2L1Q9P0L9 805 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 PDP2Q9P2J9 529 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 EXOC7Q9UPT5 735 aa14.97□□□□□ -0.01
SRP54-202ENST00000546080 MTO1Q9Y2Z2 717 aaKnown RBP14.97□□□□□ -0.01
SRP54-202ENST00000546080 PI4K2BG5E9Z4 385 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 DNAJC6O75061 913 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 P4HBP07237 508 aaKnown RBP14.96□□□□□ -0.01
SRP54-202ENST00000546080 VIL1P09327 827 aaKnown RBP14.96□□□□□ -0.01
SRP54-202ENST00000546080 RARRES1P49788 294 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 STAT2P52630 851 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 GCNT1Q02742 428 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 EFTUD2Q15029 972 aaKnown RBP eCLIP14.96□□□□□ -0.017e-8■□□□□ 11.2
SRP54-202ENST00000546080 RNASEH2BQ5TBB1 312 aaKnown RBP14.96□□□□□ -0.01
SRP54-202ENST00000546080 TATDN1Q6P1N9 297 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 USP37Q86T82 979 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 GATA6Q92908 595 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 SKA1Q96BD8 255 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 RBM41Q96IZ5 413 aaKnown RBP14.96□□□□□ -0.01
SRP54-202ENST00000546080 ZNF184Q99676 751 aaPredicted RBP14.96□□□□□ -0.01
SRP54-202ENST00000546080 TMEM120AQ9BXJ8 343 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 VPS11Q9H270 941 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 FBXO6Q9NRD1 293 aaPredicted RBP14.96□□□□□ -0.01
SRP54-202ENST00000546080 C1orf112Q9NSG2 853 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 SHOC2Q9UQ13 582 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 PCDHB2Q9Y5E7 798 aa14.96□□□□□ -0.01
SRP54-202ENST00000546080 A8MXQ7 604 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 BANF1O75531 89 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 CRKP46108 304 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 NCKAP1LP55160 1127 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 CUL3Q13618 768 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 THOC5Q13769 683 aaKnown RBP14.95□□□□□ -0.02
SRP54-202ENST00000546080 GSTA3Q16772 222 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 SLC5A9Q2M3M2 681 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 DRICH1Q6PGQ1 229 aaPredicted RBP14.95□□□□□ -0.02
SRP54-202ENST00000546080 SV2AQ7L0J3 742 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 TMC2Q8TDI7 906 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 ALKBH8Q96BT7 664 aaKnown RBP14.95□□□□□ -0.02
SRP54-202ENST00000546080 BICD1Q96G01 975 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 RIT2Q99578 217 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 GORASP1Q9BQQ3 440 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 FAM192AQ9GZU8 254 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 TAS2R1Q9NYW7 299 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 SLC17A7Q9P2U7 560 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 RABGEF1Q9UJ41 708 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 ZHX2Q9Y6X8 837 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 GOLGA8SH3BPF8 625 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 GOLGA8MH3BSY2 632 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 GOLGA8RI6L899 631 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 KRT1P04264 644 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 CYP1A1P04798 512 aaPredicted RBP14.95□□□□□ -0.02
SRP54-202ENST00000546080 GTF2H1P32780 548 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 SERPINB4P48594 390 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 GPX6P59796 221 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 MCCD1P59942 119 aaPredicted RBP14.95□□□□□ -0.02
SRP54-202ENST00000546080 TFDP1Q14186 410 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 KRT72Q14CN4 511 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 HIF1AQ16665 826 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 ZC3H12AQ5D1E8 599 aaKnown RBP14.95□□□□□ -0.02
SRP54-202ENST00000546080 LRRC6Q86X45 466 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 RCOR2Q8IZ40 523 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 ZNF276Q8N554 614 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 PRR11Q96HE9 360 aaPredicted RBP14.95□□□□□ -0.02
SRP54-202ENST00000546080 SLITRK1Q96PX8 696 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 PAFAH2Q99487 392 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 SH2D3AQ9BRG2 576 aa14.95□□□□□ -0.02
SRP54-202ENST00000546080 ZC3H12CQ9C0D7 883 aaKnown RBP14.95□□□□□ -0.02
SRP54-202ENST00000546080 C12orf65Q9H3J6 166 aaKnown RBP14.95□□□□□ -0.02
SRP54-202ENST00000546080 ALG13Q9NP73 1137 aaKnown RBP14.95□□□□□ -0.02
SRP54-202ENST00000546080 GPRC5CQ9NQ84 441 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms