RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 C2CD2Q9Y426 696 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 M0QZ92 97 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 KRIT1O00522 736 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 CTSHP09668 335 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 CAPN2P17655 700 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 AXLP30530 894 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 ATICP31939 592 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 ZNF211Q13398 564 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-213ENST00000462730 ARHGEF6Q15052 776 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 MAP9Q49MG5 647 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 PPP1R2P3Q6NXS1 205 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 MMS22LQ6ZRQ5 1243 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 PHF13Q86YI8 300 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-213ENST00000462730 CD302Q8IX05 232 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 RNPC3Q96LT9 517 aaKnown RBP15.4■□□□□ 0.06
HDAC6-213ENST00000462730 TRIM6Q9C030 488 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-213ENST00000462730 SDCBP2Q9H190 292 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 WNT8AQ9H1J5 351 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 DPP3Q9NY33 737 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 ITGA11Q9UKX5 1188 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 TTC7AQ9ULT0 858 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-213ENST00000462730 AGAP1Q9UPQ3 857 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 HES2Q9Y543 173 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 CDY2AQ9Y6F7 541 aa15.4■□□□□ 0.06
HDAC6-213ENST00000462730 FGGP02679 453 aa15.39■□□□□ 0.05
HDAC6-213ENST00000462730 GRK4P32298 578 aa15.39■□□□□ 0.05
HDAC6-213ENST00000462730 CDH8P55286 799 aa15.39■□□□□ 0.05
HDAC6-213ENST00000462730 C1QBPQ07021 282 aaKnown RBP15.39■□□□□ 0.05
HDAC6-213ENST00000462730 SMYD5Q6GMV2 418 aa15.39■□□□□ 0.05
HDAC6-213ENST00000462730 CCNI2Q6ZMN8 369 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-213ENST00000462730 RSPH3Q86UC2 560 aa15.39■□□□□ 0.05
HDAC6-213ENST00000462730 FAM228AQ86W67 206 aa15.39■□□□□ 0.05
HDAC6-213ENST00000462730 NT5DC4Q86YG4 428 aa15.39■□□□□ 0.05
HDAC6-213ENST00000462730 TFAP2BQ92481 460 aa15.39■□□□□ 0.05
HDAC6-213ENST00000462730 CD101Q93033 1021 aa15.39■□□□□ 0.05
HDAC6-213ENST00000462730 HPDLQ96IR7 371 aa15.39■□□□□ 0.05
HDAC6-213ENST00000462730 NXF3Q9H4D5 531 aaKnown RBP15.39■□□□□ 0.05
HDAC6-213ENST00000462730 TRPV2Q9Y5S1 764 aa15.39■□□□□ 0.05
HDAC6-213ENST00000462730 PTCH2Q9Y6C5 1203 aa15.39■□□□□ 0.05
HDAC6-213ENST00000462730 LSM8O95777 96 aaKnown RBP15.38■□□□□ 0.05
HDAC6-213ENST00000462730 MYBL2P10244 700 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 ITGA4P13612 1032 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 CTNNA2P26232 953 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 ACLYP53396 1101 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 RBP5P82980 135 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 PTGISQ16647 500 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 C1orf131Q8NDD1 294 aaKnown RBP15.38■□□□□ 0.05
HDAC6-213ENST00000462730 FAXDC2Q96IV6 333 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 VCPIP1Q96JH7 1222 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 SNX27Q96L92 541 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 TRIM7Q9C029 511 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 PLEKHA4Q9H4M7 779 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 VRTNQ9H8Y1 702 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 HMX1Q9NP08 348 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-213ENST00000462730 TRIM17Q9Y577 477 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 TRIP11Q15643 1979 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 CCDC188H7C350 402 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 RAD51CO43502 376 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 HEXIM1O94992 359 aaKnown RBP15.38■□□□□ 0.05
HDAC6-213ENST00000462730 P4HA1P13674 534 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 CD19P15391 556 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 CTNNA1P35221 906 aaKnown RBP15.38■□□□□ 0.05
HDAC6-213ENST00000462730 ACTN2P35609 894 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 TNNT3P45378 269 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-213ENST00000462730 YARSP54577 528 aaKnown RBP15.38■□□□□ 0.05
HDAC6-213ENST00000462730 PRMT2P55345 433 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 PTP4A2Q12974 167 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 ITGA7Q13683 1181 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 SENP6Q9GZR1 1112 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-213ENST00000462730 CXCL16Q9H2A7 254 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 PLEKHA5Q9HAU0 1116 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 FAN1Q9Y2M0 1017 aa15.38■□□□□ 0.05
HDAC6-213ENST00000462730 RECQL4O94761 1208 aa15.37■□□□□ 0.05
HDAC6-213ENST00000462730 PEX5P50542 639 aa15.37■□□□□ 0.05
HDAC6-213ENST00000462730 ORC1Q13415 861 aa15.37■□□□□ 0.05
HDAC6-213ENST00000462730 LHX8Q68G74 356 aa15.37■□□□□ 0.05
HDAC6-213ENST00000462730 AADACL2Q6P093 401 aa15.37■□□□□ 0.05
HDAC6-213ENST00000462730 TMEM35BQ8NCS4 154 aa15.37■□□□□ 0.05
HDAC6-213ENST00000462730 FAM71BQ8TC56 605 aa15.37■□□□□ 0.05
HDAC6-213ENST00000462730 NAP1L3Q99457 506 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-213ENST00000462730 APOL6Q9BWW8 343 aa15.37■□□□□ 0.05
HDAC6-213ENST00000462730 CYP3A43Q9HB55 503 aa15.37■□□□□ 0.05
HDAC6-213ENST00000462730 PCDHGC3Q9UN70 934 aa15.37■□□□□ 0.05
HDAC6-213ENST00000462730 DERAQ9Y315 318 aa15.37■□□□□ 0.05
HDAC6-213ENST00000462730 SCINQ9Y6U3 715 aa15.37■□□□□ 0.05
HDAC6-213ENST00000462730 MOXD2PA6NHM9 499 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 CABYRO75952 493 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 CHRNA1P02708 482 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 GLI1P08151 1106 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 PAEPP09466 180 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 MMP8P22894 467 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 RAD23BP54727 409 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 MGAT3Q09327 533 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 PDCD11Q14690 1871 aaKnown RBP15.36■□□□□ 0.05
HDAC6-213ENST00000462730 HSP90B2PQ58FF3 399 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 UBXN11Q5T124 520 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 SEL1L2Q5TEA6 688 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 DENND1BQ6P3S1 775 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 RPAINQ86UA6 219 aa15.36■□□□□ 0.05
HDAC6-213ENST00000462730 DDX47Q9H0S4 455 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms