RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 ZNF384Q8TF68 577 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 OLFM3Q96PB7 478 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 MRPL46Q9H2W6 279 aaKnown RBP13.47□□□□□ -0.25
SCAF8-203ENST00000417268 A0A1W2PQJ5 194 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 RAD51CO43502 376 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 PDGFRBP09619 1106 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 PSEN2P49810 448 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 CDK17Q00537 523 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 FRMPD4Q14CM0 1322 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 AGBL2Q5U5Z8 902 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 KLHDC7AQ5VTJ3 777 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 NAIF1Q69YI7 327 aaPredicted RBP13.47□□□□□ -0.25
SCAF8-203ENST00000417268 TRIM65Q6PJ69 517 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 PDIK1LQ8N165 341 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 TMC2Q8TDI7 906 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 STAMBPL1Q96FJ0 436 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 OSMRQ99650 979 aa13.47□□□□□ -0.25
SCAF8-203ENST00000417268 DPYSL4O14531 572 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 ADCY3O60266 1144 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 KRT3P12035 628 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 SHROOM1Q2M3G4 852 aaPredicted RBP13.46□□□□□ -0.25
SCAF8-203ENST00000417268 ATG16L1Q676U5 607 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 TRAPPC11Q7Z392 1133 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 DDX42Q86XP3 938 aaKnown RBP eCLIP13.46□□□□□ -0.25
SCAF8-203ENST00000417268 DTX3LQ8TDB6 740 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 ZBTB10Q96DT7 871 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 APBA2Q99767 749 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 PCSK1NQ9UHG2 260 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 NFASCO94856 1347 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 ITGB3P05106 788 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 LGALS2P05162 132 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
SCAF8-203ENST00000417268 GRIK1P39086 918 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 ARFIP2P53365 341 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 DGKZQ13574 1117 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 EFHC2Q5JST6 749 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 CCDC137Q6PK04 289 aaKnown RBP13.46□□□□□ -0.25
SCAF8-203ENST00000417268 HEMGNQ9BXL5 484 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 EHD2Q9NZN4 543 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 ZC3H4Q9UPT8 1303 aaKnown RBP13.46□□□□□ -0.25
SCAF8-203ENST00000417268 IQANK1A0A1B0GTG1 560 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 AP2B1P63010 937 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 MAF1Q9H063 256 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 DPP3Q9NY33 737 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 UVRAGQ9P2Y5 699 aa13.46□□□□□ -0.25
SCAF8-203ENST00000417268 GOLGA8CPA6NN73 597 aa13.46□□□□□ -0.26
SCAF8-203ENST00000417268 PPP1R12AO14974 1030 aaPredicted RBP13.46□□□□□ -0.26
SCAF8-203ENST00000417268 CABYRO75952 493 aa13.46□□□□□ -0.26
SCAF8-203ENST00000417268 ERFP50548 548 aa13.46□□□□□ -0.26
SCAF8-203ENST00000417268 ATN1P54259 1190 aaPredicted RBP13.46□□□□□ -0.26
SCAF8-203ENST00000417268 EPHB1P54762 984 aa13.46□□□□□ -0.26
SCAF8-203ENST00000417268 CRLF3Q8IUI8 442 aa13.46□□□□□ -0.26
SCAF8-203ENST00000417268 TRIM51Q9BSJ1 452 aa13.46□□□□□ -0.26
SCAF8-203ENST00000417268 EFHD1Q9BUP0 239 aa13.46□□□□□ -0.26
SCAF8-203ENST00000417268 DRC3Q9H069 523 aa13.46□□□□□ -0.26
SCAF8-203ENST00000417268 WNT8AQ9H1J5 351 aa13.46□□□□□ -0.26
SCAF8-203ENST00000417268 AAASQ9NRG9 546 aa13.46□□□□□ -0.26
SCAF8-203ENST00000417268 TRPM3Q9HCF6 1732 aaPredicted RBP13.46□□□□□ -0.26
SCAF8-203ENST00000417268 ATRNL1Q5VV63 1379 aa13.46□□□□□ -0.26
SCAF8-203ENST00000417268 PLIN4Q96Q06 1357 aa13.46□□□□□ -0.26
SCAF8-203ENST00000417268 IGF2BP3O00425 579 aaKnown RBP eCLIP13.45□□□□□ -0.26
SCAF8-203ENST00000417268 WEE2P0C1S8 567 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 SPRYD7Q5W111 196 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 RGS9BPQ6ZS82 235 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 ZNF677Q86XU0 584 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 MED15Q96RN5 788 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 COLEC11Q9BWP8 271 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 RNF208Q9H0X6 261 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 DDX56Q9NY93 547 aaKnown RBP13.45□□□□□ -0.26
SCAF8-203ENST00000417268 KLK14Q9P0G3 267 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 ZNF711Q9Y462 761 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 AFG3L2Q9Y4W6 797 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 BTBD19C9JJ37 291 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 LCP1P13796 627 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 GARSP41250 739 aaKnown RBP13.45□□□□□ -0.26
SCAF8-203ENST00000417268 MDM2Q00987 491 aaPredicted RBP13.45□□□□□ -0.26
SCAF8-203ENST00000417268 SEZ6Q53EL9 994 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 HAS1Q92839 578 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 TRIM56Q9BRZ2 755 aaKnown RBP13.45□□□□□ -0.26
SCAF8-203ENST00000417268 SEMA6BQ9H3T3 888 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 BLOC1S4Q9NUP1 217 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 PRG3Q9Y2Y8 225 aaPredicted RBP13.45□□□□□ -0.26
SCAF8-203ENST00000417268 FOXP2O15409 715 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 TTC4O95801 387 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 CPP00450 1065 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 ALDH7A1P49419 539 aaKnown RBP13.45□□□□□ -0.26
SCAF8-203ENST00000417268 SUGP1Q8IWZ8 645 aaKnown RBP13.45□□□□□ -0.26
SCAF8-203ENST00000417268 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.45□□□□□ -0.26
SCAF8-203ENST00000417268 MDM1Q8TC05 714 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 DNAJB3Q8WWF6 145 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 RGPD2P0DJD1 1756 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 ZC3H11AO75152 810 aaKnown RBP eCLIP13.45□□□□□ -0.263e-8■■■■□ 26.2
SCAF8-203ENST00000417268 B3GAT3O94766 335 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 GNL1P36915 607 aaPredicted RBP13.45□□□□□ -0.26
SCAF8-203ENST00000417268 HSD17B4P51659 736 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 DHX34Q14147 1143 aaKnown RBP13.45□□□□□ -0.26
SCAF8-203ENST00000417268 ZPBP2Q6X784 338 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 C4orf50Q6ZRC1 276 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 ZNF410Q86VK4 478 aa13.45□□□□□ -0.26
SCAF8-203ENST00000417268 TEX9Q8N6V9 391 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms