RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ZNF200P98182 395 aaPredicted RBP13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 Q4G0T1 1027 aa13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 TMEM270Q6UE05 265 aa13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 RFFLQ8WZ73 363 aa13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 PACSIN1Q9BY11 444 aa13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 LARGE1O95461 756 aa13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 MDM1Q8TC05 714 aa13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 PLEKHA5Q9HAU0 1116 aa13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 COPRSQ9NQ92 184 aa13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 PCSK1NQ9UHG2 260 aa13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 PCP4L1A6NKN8 68 aa13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 BCAR1P56945 870 aa13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
SRGAP3-201ENST00000360413 ZBTB39O15060 712 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 TEX33O43247 280 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 SMNDC1O75940 238 aaKnown RBP eCLIP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 RXRGP48443 463 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 DUOXA2Q1HG44 320 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 DCAF4L1Q3SXM0 396 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 ZNF394Q53GI3 561 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 ZNF746Q6NUN9 644 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 C6orf62Q9GZU0 229 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 RABGEF1Q9UJ41 708 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 UBN2Q6ZU65 1347 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 PLEKHG1Q9ULL1 1385 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 C3orf70A6NLC5 250 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 PDE8BO95263 885 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 RPLP2P05387 115 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 EFNA5P52803 228 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 SHROOM1Q2M3G4 852 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 PGBD4Q96DM1 585 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 ZFRQ96KR1 1074 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 EVA1BQ9NVM1 165 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 NR3C1P04150 777 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 SERPINB9P50453 376 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 PTK7Q13308 1070 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 ZMYM1Q5SVZ6 1142 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 KDM7AQ6ZMT4 941 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 MYCBPAPQ8TBZ2 947 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 LOC100653049A0A140TA62 436 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 CCDC189A1A4V9 331 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 NDUFS3O75489 264 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 KRT34O76011 436 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 TTC39BQ5VTQ0 682 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 KCTD1Q719H9 257 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 CYFIP1Q7L576 1253 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 RBBP8NLQ8NC74 664 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 WDR60Q8WVS4 1066 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 CROCC2H7BZ55 1655 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 CASP1P29466 404 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 ZCCHC7Q8N3Z6 543 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 YIPF2Q9BWQ6 316 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 LIMA1Q9UHB6 759 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 XPO7Q9UIA9 1087 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 KANSL1LA0AUZ9 987 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 MYL3P08590 195 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 ZNF23P17027 643 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 AMPD2Q01433 879 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 TTLL9Q3SXZ7 439 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 LAYNQ6UX15 382 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 C11orf70Q9BRQ4 267 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 IRX2Q9BZI1 471 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 FAM192AQ9GZU8 254 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 SMIM31A0A1B0GVY4 71 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 SH2B2O14492 632 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 HSMCR30P0CW71 290 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 MTA1Q13330 715 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 C1DQ13901 141 aaKnown RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 DRAP1Q14919 205 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 C12orf60Q5U649 245 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 LRRC8DQ7L1W4 858 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 RIBC1Q8N443 379 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 FAM45AQ8TCE6 357 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 TMEM79Q9BSE2 394 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 FRMD8Q9BZ67 464 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 ROPN1BQ9BZX4 212 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 ROPN1Q9HAT0 212 aaPredicted RBP13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 WDR35Q9P2L0 1181 aa13.75□□□□□ -0.21
SRGAP3-201ENST00000360413 DNAJC3Q13217 504 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 AAASQ9NRG9 546 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 NEU2Q9Y3R4 380 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 HNMTP50135 292 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 TSHZ1Q6ZSZ6 1077 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 ANKRD49Q8WVL7 239 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 GALNT8Q9NY28 637 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 PSMD12O00232 456 aaPredicted RBP13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 KCNN4O15554 427 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 APRTP07741 180 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 AKT1P31749 480 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 NFIAQ12857 509 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 USP33Q8TEY7 942 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 NEK6Q9HC98 313 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 RBM12Q9NTZ6 932 aaKnown RBP13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 PRMT3O60678 531 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 GUCY1B2O75343 617 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 RRM2P31350 389 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 CHI3L2Q15782 390 aa13.74□□□□□ -0.21
SRGAP3-201ENST00000360413 RASGRP2Q7LDG7 609 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms