RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 PPP2R3CQ969Q6 453 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 BTBD6Q96KE9 485 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 SH3GL2Q99962 352 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 MID2Q9UJV3 735 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 R3HDM2Q9Y2K5 976 aaKnown RBP16.23■□□□□ 0.19
SRPK1-201ENST00000346162 COMMD3-BMI1R4GMX3 469 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 GOLGA8RI6L899 631 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 SRGAP2BP0DMP2 458 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 SDC4P31431 198 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 MCL1Q07820 350 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.23■□□□□ 0.19
SRPK1-201ENST00000346162 ATL2Q8NHH9 583 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 EME1Q96AY2 570 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 CCDC195A0A1B0GUA6 201 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 CYTH3O43739 400 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 HSPA8P11142 646 aaKnown RBP16.23■□□□□ 0.19
SRPK1-201ENST00000346162 HDAC4P56524 1084 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 STX1BP61266 288 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 GJC2Q5T442 439 aaPredicted RBP16.23■□□□□ 0.19
SRPK1-201ENST00000346162 CPA5Q8WXQ8 436 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 CNBD2Q96M20 576 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 MRPL40Q9NQ50 206 aaKnown RBP16.23■□□□□ 0.19
SRPK1-201ENST00000346162 TMCO1Q9UM00 188 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 SH3BP1Q9Y3L3 701 aa16.23■□□□□ 0.19
SRPK1-201ENST00000346162 ETS2P15036 469 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 SERPINB1P30740 379 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 IL1RL1Q01638 556 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 GIT2Q14161 759 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 ZNF184Q99676 751 aaPredicted RBP16.22■□□□□ 0.19
SRPK1-201ENST00000346162 ARHGAP20Q9P2F6 1191 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 RGL2O15211 777 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 P4HA2O15460 535 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 APOA1P02647 267 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 PYGBP11216 843 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 KCNA4P22459 653 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 CASP4P49662 377 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 SPOUT1Q5T280 376 aaKnown RBP16.22■□□□□ 0.19
SRPK1-201ENST00000346162 GALNT15Q8N3T1 639 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 KIAA0895Q8NCT3 520 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 SCFD1Q8WVM8 642 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 PAIP1Q9H074 479 aaKnown RBP16.22■□□□□ 0.19
SRPK1-201ENST00000346162 TUBA8Q9NY65 449 aaPredicted RBP16.22■□□□□ 0.19
SRPK1-201ENST00000346162 DTNAQ9Y4J8 743 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 RIC1Q4ADV7 1423 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 FER1L4A9Z1Z3 1794 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 C19orf81C9J6K1 198 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 PDE2AO00408 941 aaPredicted RBP16.22■□□□□ 0.19
SRPK1-201ENST00000346162 RASSF9O75901 435 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 PON1P27169 355 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 RGS2P41220 211 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 WDR72Q3MJ13 1102 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 CLIC5Q9NZA1 410 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 MTO1Q9Y2Z2 717 aaKnown RBP16.22■□□□□ 0.19
SRPK1-201ENST00000346162 PHF2O75151 1096 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 INPP1P49441 399 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 ATP1A4Q13733 1029 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 GMCL1Q96IK5 515 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 HEY2Q9UBP5 337 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 TLK1Q9UKI8 766 aa16.22■□□□□ 0.19
SRPK1-201ENST00000346162 MAFGO15525 162 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 PRKCBP05771 671 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 COMTP21964 271 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 PRKCEQ02156 737 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 FAM102AQ5T9C2 384 aaPredicted RBP16.21■□□□□ 0.19
SRPK1-201ENST00000346162 SH3RF1Q7Z6J0 888 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 COQ7Q99807 217 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 OSBPL8Q9BZF1 889 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 CCDC90BQ9GZT6 254 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 TMEM8AQ9HCN3 771 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 KRT82Q9NSB4 513 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 KRT38O76015 456 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 RIPK1Q13546 671 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 TAF1BQ53T94 588 aaPredicted RBP16.21■□□□□ 0.19
SRPK1-201ENST00000346162 TMC5Q6UXY8 1006 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 DSTYKQ6XUX3 929 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 RBM46Q8TBY0 533 aaKnown RBP16.21■□□□□ 0.19
SRPK1-201ENST00000346162 ATG4CQ96DT6 458 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 DDX50Q9BQ39 737 aaKnown RBP16.21■□□□□ 0.19
SRPK1-201ENST00000346162 ANKEF1Q9NU02 776 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 STX18Q9P2W9 335 aaKnown RBP16.21■□□□□ 0.19
SRPK1-201ENST00000346162 PCDHB2Q9Y5E7 798 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 SNX5Q9Y5X3 404 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 F8VZ95 297 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 PI4K2BG5E9Z4 385 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 DNM1LO00429 736 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 ABLIM1O14639 778 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 PDIA2Q13087 525 aaKnown RBP16.21■□□□□ 0.19
SRPK1-201ENST00000346162 NCOA4Q13772 614 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 WLSQ5T9L3 541 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 SYDE1Q6ZW31 735 aaPredicted RBP16.21■□□□□ 0.19
SRPK1-201ENST00000346162 C17orf50Q8WW18 174 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 CEP19Q96LK0 163 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 TAAR1Q96RJ0 339 aa16.21■□□□□ 0.19
SRPK1-201ENST00000346162 DDX56Q9NY93 547 aaKnown RBP16.21■□□□□ 0.19
SRPK1-201ENST00000346162 SHMT1P34896 483 aa16.21■□□□□ 0.18
SRPK1-201ENST00000346162 CREG2Q8IUH2 290 aa16.21■□□□□ 0.18
SRPK1-201ENST00000346162 ZBED8Q8IZ13 594 aa16.21■□□□□ 0.18
SRPK1-201ENST00000346162 DEPDC1BQ8WUY9 529 aa16.21■□□□□ 0.18
SRPK1-201ENST00000346162 SEPT1Q8WYJ6 367 aa16.21■□□□□ 0.18
SRPK1-201ENST00000346162 OATP04181 439 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms