RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 CASKIN2Q8WXE0 1202 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 N4BP2L2Q92802 583 aaPredicted RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 MTFMTQ96DP5 389 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 PWWP2AQ96N64 755 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 DDX50Q9BQ39 737 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 MRPL44Q9H9J2 332 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 SEC61A2Q9H9S3 476 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 SUGCTQ9HAC7 445 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 HCN3Q9P1Z3 774 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 MYO1AQ9UBC5 1043 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ABCG2Q9UNQ0 655 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 RRP15Q9Y3B9 282 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 SAMD9LQ8IVG5 1584 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 A0A1B0GTH6 734 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ANKRD34BA5PLL1 514 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 LIN7AO14910 233 aaPredicted RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 PTBP3O95758 552 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 PCCBP05166 539 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 SNRPA1P09661 255 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 FOXN2P32314 431 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 EIF4A3P38919 411 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 AMPHP49418 695 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 VPS41P49754 854 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 SMSP52788 366 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 CACNB3P54284 484 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 OAZ1P54368 228 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 EPHB4P54760 987 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 C1QTNF8P60827 252 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ITIH3Q06033 890 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 MCL1Q07820 350 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 EPS8Q12929 822 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 KIAA0141Q14154 515 aaPredicted RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 TCEAL1Q15170 157 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 SF3B3Q15393 1217 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 LRIT3Q3SXY7 679 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 SFRP5Q5T4F7 317 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 C6orf118Q5T5N4 469 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 NUDT18Q6ZVK8 323 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 BMP8AQ7Z5Y6 402 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 TTC30AQ86WT1 665 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 PGBD5Q8N414 524 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 RYBPQ8N488 228 aaPredicted RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 RPRMLQ8N4K4 120 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ANKRD42Q8N9B4 389 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 KCTD6Q8NC69 237 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 SNRNP40Q96DI7 357 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 BRIP1Q9BX63 1249 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 EVA1BQ9NVM1 165 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 TRPM5Q9NZQ8 1165 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 STOX2Q9P2F5 926 aaPredicted RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 PDP2Q9P2J9 529 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 BOLA1Q9Y3E2 137 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 TLL2Q9Y6L7 1015 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 XIRP1Q702N8 1843 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 NRXN2Q9P2S2 1712 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 MARF1Q9Y4F3 1742 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 KIF15Q9NS87 1388 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 PDE2AO00408 941 aaPredicted RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 TRPA1O75762 1119 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ZMPSTE24O75844 475 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 SEC14L2O76054 403 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 THBS1P07996 1170 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 CLTAP09496 248 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ZNF8P17098 575 aaPredicted RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 CBLP22681 906 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 MSX1P28360 303 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 SLC6A11P48066 632 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 KIF11P52732 1056 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 EIF4A1P60842 406 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 SUMO1P63165 101 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 ADAM8P78325 824 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 GABREP78334 506 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ST5P78524 1137 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ABRQ12979 859 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 SNX1Q13596 522 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 PDE3AQ14432 1141 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 SAFBQ15424 915 aaKnown RBP eCLIP1.36□□□□□ -2.19
CEP290-201ENST00000309041 XKR6Q5GH73 641 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 MCTP1Q6DN14 999 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 TMEM88Q6PEY1 159 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 ANKS3Q6ZW76 656 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 TRIM69Q86WT6 500 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 CIR1Q86X95 450 aaPredicted RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 XYLT1Q86Y38 959 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 COMMD1Q8N668 190 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 AMER2Q8N7J2 671 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 PYM1Q9BRP8 204 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 MIR1-1HGQ9H1L0 117 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 MANSC1Q9H8J5 431 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 KMT5AQ9NQR1 393 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 TSPAN16Q9UKR8 245 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 PCDHGC3Q9UN70 934 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 G3BP2Q9UN86 482 aaKnown RBP1.36□□□□□ -2.19
CEP290-201ENST00000309041 GRIN2AQ12879 1464 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 TNFRSF10CO14798 259 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 MTA2O94776 668 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 IVLP07476 585 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 CCDC130P13994 396 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 CD97P48960 835 aa1.36□□□□□ -2.19
CEP290-201ENST00000309041 RABGGTBP53611 331 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms