RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Uchl4P58321 233 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 SbdsP70122 250 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Togaram2Q3TYG6 1002 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Psd2Q6P1I6 770 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 N4bp3Q8C7U1 537 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 ClasrpQ8CFC7 668 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 PrameQ9D4Z5 464 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Ddx24Q9ESV0 857 aaKnown RBP11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Prmt2Q9R144 448 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Cry2Q9R194 592 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Taf1Q80UV9 1891 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Zfp457L7N1X4 647 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Pdha1P35486 390 aaKnown RBP11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Rnf216P58283 853 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Sparcl1P70663 650 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Mark3Q03141 753 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Pdlim7Q3TJD7 457 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Fdxacb1Q3UY23 622 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Ece1Q4PZA2 769 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Tcf4Q60722 670 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Stip1Q60864 543 aaKnown RBP11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Serpinb13Q8CDC0 389 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Sapcd2Q9D818 391 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Tmem68Q9D850 329 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 Kif9Q9WV04 790 aa11.91□□□□□ -0.5
Lig1-211ENSMUST00000177588 NumblO08919 604 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Capn6O35646 641 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Slc24a2Q14BI1 711 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Rufy4Q3TYX8 563 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Gm13103Q4VAD2 491 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Gm14685Q52KH6 695 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Xlr3cQ61806 226 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Cyp3a11Q64459 504 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 GnasQ6R0H7 1133 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Kcnk18Q6VV64 394 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Osbpl2Q8BX94 484 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Exd1Q8CDF7 570 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Znf276Q8CE64 614 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Usp26Q99MX1 835 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Arhgef25Q9CWR0 618 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Robo3Q9Z2I4 1366 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Has3O08650 554 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Banf1O54962 89 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Grm2Q14BI2 872 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Gpd2Q64521 727 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Sh3rf1Q69ZI1 892 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 NostrinQ6WKZ7 506 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Pgrmc2Q80UU9 217 aaKnown RBP11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Impg2Q80XH2 1243 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Slitrk1Q810C1 696 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Bri3bpQ8BXV2 253 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Gnl3Q8CI11 538 aaKnown RBP11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Stx18Q8VDS8 334 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Kdm4bQ91VY5 1086 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 NkapQ9D0F4 415 aaKnown RBP11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Olr1Q9EQ09 363 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Rnf14Q9JI90 485 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Stk32bQ9JJX8 414 aa11.9□□□□□ -0.5
Lig1-211ENSMUST00000177588 Gm16430A6X8J1 155 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 TroapB7ZNG4 668 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Lonrf1D3YY23 762 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Gcnt4E9Q649 455 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Tekt5G5E8A8 557 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 HpdP49429 393 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Tmem63bQ3TWI9 832 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Slc9b2Q5BKR2 547 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Tcf12Q61286 706 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Sv2cQ69ZS6 727 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Garem2Q6PAJ3 880 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Rimbp2Q80U40 1072 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Nipa1Q8BHK1 323 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Usp37Q8C0R0 979 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Ugt3a2Q8JZZ0 523 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Ankef1Q9D2J7 775 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Slxl1Q9D515 155 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Tmem206Q9D771 350 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 EloblA6PWE0 161 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Gm15448F6PZL4 682 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Dusp8O09112 663 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Anxa8O35640 327 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Mmp10O55123 476 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Nptx2O70340 429 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 PrkchP23298 683 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Myl2P51667 166 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Rasgrf2P70392 1189 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 NfibP97863 570 aaKnown RBP11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 GabpaQ00422 454 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Zbtb14Q08376 449 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Ppm1jQ149T7 507 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Grm6Q5NCH9 871 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Prr18Q6PAN7 307 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 C2cd5Q7TPS5 1016 aaKnown RBP11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 EtnpplQ8BWU8 499 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Ldlrap1Q8C142 308 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Kdm1bQ8CIG3 826 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Setd3Q91WC0 594 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Ssu72Q9CY97 194 aaKnown RBP11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Cntn6Q9JMB8 1028 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 2210011C24RikA0A087WQ89 206 aa11.89□□□□□ -0.51
Lig1-211ENSMUST00000177588 Ppp1r36D3Z0R2 411 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms