RNA–Protein interactions for RNA: snR17a

snR17a, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17a, Length 333 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17a	snR17a	ERG26	P53199	349 aa	Known RBP	3.12	□□□□□ -1.91
snR17a	snR17a	WSC2	P53832	503 aa		3.12	□□□□□ -1.91
snR17a	snR17a	APJ1	P53940	528 aa		3.12	□□□□□ -1.91
snR17a	snR17a	YNL010W	P53981	241 aa	Known RBP	3.12	□□□□□ -1.91
snR17a	snR17a	YVH1	Q02256	364 aa	Known RBP	3.12	□□□□□ -1.91
snR17a	snR17a	VPS28	Q02767	242 aa		3.12	□□□□□ -1.91
snR17a	snR17a	YDR415C	Q04033	374 aa	Predicted RBP	3.12	□□□□□ -1.91
snR17a	snR17a	THI74	Q04083	370 aa		3.12	□□□□□ -1.91
snR17a	snR17a	GAL83	Q04739	417 aa		3.12	□□□□□ -1.91
snR17a	snR17a	SHH4	Q06236	168 aa		3.12	□□□□□ -1.91
snR17a	snR17a	YLR042C	Q07990	161 aa		3.12	□□□□□ -1.91
snR17a	snR17a	FDH1	Q08911	376 aa		3.12	□□□□□ -1.91
snR17a	snR17a	NCE102	Q12207	173 aa	RIP-Chip data	3.12	□□□□□ -1.91	not detected
snR17a	snR17a	IZH2	Q12442	317 aa		3.12	□□□□□ -1.91
snR17a	snR17a	YLR412C-A	Q3E742	68 aa		3.12	□□□□□ -1.91
snR17a	snR17a	NUP170	P38181	1502 aa		3.12	□□□□□ -1.91
snR17a	snR17a	TY1B-NL2	Q99337	1749 aa	Known RBP	3.11	□□□□□ -1.91
snR17a	snR17a	COX5B	P00425	151 aa		3.11	□□□□□ -1.91
snR17a	snR17a	SIR2	P06700	562 aa		3.11	□□□□□ -1.91
snR17a	snR17a	SEC4	P07560	215 aa	Known RBP	3.11	□□□□□ -1.91
snR17a	snR17a	RPL42A	P0CX27	106 aa	Known RBP	3.11	□□□□□ -1.91
snR17a	snR17a	RPL42B	P0CX28	106 aa	Known RBP	3.11	□□□□□ -1.91
snR17a	snR17a	RPB5	P20434	215 aa		3.11	□□□□□ -1.91
snR17a	snR17a	COX10	P21592	462 aa		3.11	□□□□□ -1.91
snR17a	snR17a	MTR2	P34232	184 aa	Known RBP	3.11	□□□□□ -1.91
snR17a	snR17a	YKL102C	P34249	101 aa		3.11	□□□□□ -1.91
snR17a	snR17a	RPL14B	P38754	138 aa	Known RBP	3.11	□□□□□ -1.91
snR17a	snR17a	MST28	P39552	234 aa		3.11	□□□□□ -1.91
snR17a	snR17a	YER188W	P40103	239 aa		3.11	□□□□□ -1.91
snR17a	snR17a	RPL13B	P40212	199 aa	Known RBP	3.11	□□□□□ -1.91
snR17a	snR17a	DLS1	P40366	167 aa		3.11	□□□□□ -1.91
snR17a	snR17a	RRT5	P43607	289 aa		3.11	□□□□□ -1.91
snR17a	snR17a	YFR054C	P43622	192 aa		3.11	□□□□□ -1.91
snR17a	snR17a	TTI2	P47168	421 aa		3.11	□□□□□ -1.91
snR17a	snR17a	LSM3	P57743	89 aa	Known RBP	3.11	□□□□□ -1.91
snR17a	snR17a	YDL218W	Q07629	317 aa		3.11	□□□□□ -1.91
snR17a	snR17a	COQ10	Q08058	207 aa		3.11	□□□□□ -1.91
snR17a	snR17a	PRR2	Q12310	699 aa		3.11	□□□□□ -1.91
snR17a	snR17a	PST1	Q12355	444 aa		3.11	□□□□□ -1.91
snR17a	snR17a	HUT1	Q12520	339 aa		3.11	□□□□□ -1.91
snR17a	snR17a	YBL112C	Q3E7Y4	105 aa		3.11	□□□□□ -1.91
snR17a	snR17a	YLR419W	Q06698	1435 aa	Known RBP	3.1	□□□□□ -1.91
snR17a	snR17a	MSI1	P13712	422 aa		3.1	□□□□□ -1.91
snR17a	snR17a	ANB1	P19211	157 aa		3.1	□□□□□ -1.91
snR17a	snR17a	MRPL20	P22354	195 aa	Predicted RBP	3.1	□□□□□ -1.91
snR17a	snR17a	TIP1	P27654	210 aa	Predicted RBP	3.1	□□□□□ -1.91
snR17a	snR17a	YHL049C	P38722	271 aa		3.1	□□□□□ -1.91
snR17a	snR17a	IPT1	P38954	527 aa		3.1	□□□□□ -1.91
snR17a	snR17a	GAA1	P39012	614 aa		3.1	□□□□□ -1.91
snR17a	snR17a	SPC25	P40014	221 aa		3.1	□□□□□ -1.91
snR17a	snR17a	WWM1	P43582	211 aa	Known RBP	3.1	□□□□□ -1.91
snR17a	snR17a	DAN1	P47178	298 aa		3.1	□□□□□ -1.91
snR17a	snR17a	YPL067C	Q02754	198 aa		3.1	□□□□□ -1.91
snR17a	snR17a	BET5	Q03630	159 aa		3.1	□□□□□ -1.91
snR17a	snR17a	YML018C	Q03730	393 aa		3.1	□□□□□ -1.91
snR17a	snR17a	FCF1	Q05498	189 aa	Predicted RBP	3.1	□□□□□ -1.91
snR17a	snR17a	UPS1	Q05776	175 aa		3.1	□□□□□ -1.91
snR17a	snR17a	RRG7	Q08774	242 aa	Predicted RBP	3.1	□□□□□ -1.91
snR17a	snR17a	YLR112W	Q12130	139 aa		3.1	□□□□□ -1.91
snR17a	snR17a	YPS3	Q12303	508 aa		3.1	□□□□□ -1.91
snR17a	snR17a	YEL009C-A	A0A023PZF2	135 aa		3.09	□□□□□ -1.91
snR17a	snR17a	ADH1	P00330	348 aa	Known RBP	3.09	□□□□□ -1.91
snR17a	snR17a	ATP5	P09457	212 aa		3.09	□□□□□ -1.91
snR17a	snR17a	RPL30	P14120	105 aa	Known RBP	3.09	□□□□□ -1.91
snR17a	snR17a	FUN14	P18411	198 aa		3.09	□□□□□ -1.91
snR17a	snR17a	YCR100C	P25606	316 aa		3.09	□□□□□ -1.91
snR17a	snR17a	RPL16B	P26785	198 aa	Known RBP	3.09	□□□□□ -1.91
snR17a	snR17a	FMT1	P32785	401 aa		3.09	□□□□□ -1.91
snR17a	snR17a	YBL081W	P38180	368 aa	Known RBP	3.09	□□□□□ -1.91
snR17a	snR17a	MED6	P38782	295 aa		3.09	□□□□□ -1.91
snR17a	snR17a	YHR140W	P38842	239 aa		3.09	□□□□□ -1.91
snR17a	snR17a	PRM5	P40476	318 aa		3.09	□□□□□ -1.91
snR17a	snR17a	YIL012W	P40551	113 aa		3.09	□□□□□ -1.91
snR17a	snR17a	KEG1	P43614	200 aa		3.09	□□□□□ -1.91
snR17a	snR17a	YGL039W	P53183	348 aa	Known RBP	3.09	□□□□□ -1.91
snR17a	snR17a	SWS2	P53937	143 aa		3.09	□□□□□ -1.91
snR17a	snR17a	NUP100	Q02629	959 aa		3.09	□□□□□ -1.91
snR17a	snR17a	YMR099C	Q03161	297 aa	Known RBP	3.09	□□□□□ -1.91
snR17a	snR17a	UPS3	Q04006	179 aa		3.09	□□□□□ -1.91
snR17a	snR17a	HRI1	Q05905	244 aa	Known RBP	3.09	□□□□□ -1.91
snR17a	snR17a	NAT3	Q06504	195 aa		3.09	□□□□□ -1.91
snR17a	snR17a	GPI11	Q06636	219 aa		3.09	□□□□□ -1.91
snR17a	snR17a	SWC7	Q06707	132 aa		3.09	□□□□□ -1.91
snR17a	snR17a	GAT3	Q07928	141 aa		3.09	□□□□□ -1.91
snR17a	snR17a	SLD7	Q08457	257 aa		3.09	□□□□□ -1.91
snR17a	snR17a	DGA1	Q08650	418 aa		3.09	□□□□□ -1.91
snR17a	snR17a	SLM3	Q12093	417 aa		3.09	□□□□□ -1.91
snR17a	snR17a	RFM1	Q12192	310 aa		3.09	□□□□□ -1.91
snR17a	snR17a	ROM2	P51862	1356 aa	Known RBP	3.09	□□□□□ -1.92
snR17a	snR17a	ULS1	Q08562	1619 aa		3.08	□□□□□ -1.92
snR17a	snR17a	SUC2	P00724	532 aa		3.08	□□□□□ -1.92
snR17a	snR17a	YPR170W-B	P0C5R9	85 aa		3.08	□□□□□ -1.92
snR17a	snR17a	HAP3	P13434	144 aa		3.08	□□□□□ -1.92
snR17a	snR17a	SNC1	P31109	117 aa		3.08	□□□□□ -1.92
snR17a	snR17a	TEM1	P38987	245 aa		3.08	□□□□□ -1.92
snR17a	snR17a	CCS1	P40202	249 aa	Known RBP	3.08	□□□□□ -1.92
snR17a	snR17a	HMS2	P47175	358 aa		3.08	□□□□□ -1.92
snR17a	snR17a	SNN1	P48232	102 aa		3.08	□□□□□ -1.92
snR17a	snR17a	MRH4	P53166	561 aa		3.08	□□□□□ -1.92
snR17a	snR17a	CLD1	P53264	445 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms