RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C YOS1Q3E834 85 aa3.92□□□□□ -1.78
GDE1YPL110C YEL009C-AA0A023PZF2 135 aa3.92□□□□□ -1.78
GDE1YPL110C KRE1P17260 313 aa3.92□□□□□ -1.78
GDE1YPL110C TOA2P32774 122 aa3.92□□□□□ -1.78
GDE1YPL110C TIR2P33890 251 aa3.92□□□□□ -1.78
GDE1YPL110C MSY1P48527 492 aa3.92□□□□□ -1.78
GDE1YPL110C MSO1P53604 210 aaKnown RBP3.92□□□□□ -1.78
GDE1YPL110C MSS11Q03825 758 aa3.92□□□□□ -1.78
GDE1YPL110C HPF1Q05164 967 aa3.92□□□□□ -1.78
GDE1YPL110C LIP2Q06005 328 aa3.92□□□□□ -1.78
GDE1YPL110C POR1P04840 283 aaKnown RBP3.91□□□□□ -1.78
GDE1YPL110C SHB17P36136 271 aaKnown RBP3.91□□□□□ -1.78
GDE1YPL110C FMP46P36141 133 aaKnown RBP3.91□□□□□ -1.78
GDE1YPL110C MRPS9P38120 278 aa3.91□□□□□ -1.78
GDE1YPL110C TRS20P38334 175 aa3.91□□□□□ -1.78
GDE1YPL110C COQ5P49017 307 aa3.91□□□□□ -1.78
GDE1YPL110C YIP5P53108 310 aa3.91□□□□□ -1.78
GDE1YPL110C TSA2Q04120 196 aa3.91□□□□□ -1.78
GDE1YPL110C HNT1Q04344 158 aaKnown RBP3.91□□□□□ -1.78
GDE1YPL110C YPS1P32329 569 aa3.91□□□□□ -1.78
GDE1YPL110C PEX7P39108 375 aa3.91□□□□□ -1.78
GDE1YPL110C YFL065CP43539 102 aa3.91□□□□□ -1.78
GDE1YPL110C YPR203WQ08994 102 aa3.91□□□□□ -1.78
GDE1YPL110C YPQ1Q12010 308 aa3.91□□□□□ -1.78
GDE1YPL110C COX1P00401 534 aa3.91□□□□□ -1.78
GDE1YPL110C RAD6P06104 172 aa3.91□□□□□ -1.78
GDE1YPL110C NNK1P36003 928 aa3.91□□□□□ -1.78
GDE1YPL110C NDT80P38830 627 aa3.91□□□□□ -1.78
GDE1YPL110C DUG3P53871 357 aa3.91□□□□□ -1.78
GDE1YPL110C UPS1Q05776 175 aa3.91□□□□□ -1.78
GDE1YPL110C PRP46Q12417 451 aaPredicted RBP3.91□□□□□ -1.78
GDE1YPL110C PRO1P32264 428 aa3.9□□□□□ -1.78
GDE1YPL110C PRY1P47032 299 aa3.9□□□□□ -1.78
GDE1YPL110C BNS1P50084 137 aa3.9□□□□□ -1.78
GDE1YPL110C YIF1P53845 314 aaKnown RBP3.9□□□□□ -1.78
GDE1YPL110C EST3Q03096 181 aa3.9□□□□□ -1.78
GDE1YPL110C VBA1Q04301 562 aa3.9□□□□□ -1.78
GDE1YPL110C YOR376WQ08900 122 aa3.9□□□□□ -1.78
GDE1YPL110C COX19Q3E731 98 aa3.9□□□□□ -1.78
GDE1YPL110C MGT1P26188 188 aa3.9□□□□□ -1.79
GDE1YPL110C MRPL49P40858 161 aaPredicted RBP3.9□□□□□ -1.79
GDE1YPL110C BRR6P53062 197 aa3.9□□□□□ -1.79
GDE1YPL110C IRC15Q02733 499 aa3.9□□□□□ -1.79
GDE1YPL110C NUP53Q03790 475 aa3.9□□□□□ -1.79
GDE1YPL110C CPA1P07258 411 aaKnown RBP3.9□□□□□ -1.79
GDE1YPL110C SAM35P14693 329 aa3.9□□□□□ -1.79
GDE1YPL110C PAU16P35994 123 aa3.9□□□□□ -1.79
GDE1YPL110C XPT1P47165 209 aa3.9□□□□□ -1.79
GDE1YPL110C IZH1Q03419 316 aa3.9□□□□□ -1.79
GDE1YPL110C YDR344CQ05510 147 aa3.9□□□□□ -1.79
GDE1YPL110C DIF1O13577 133 aa3.89□□□□□ -1.79
GDE1YPL110C RIP1P08067 215 aa3.89□□□□□ -1.79
GDE1YPL110C INO4P13902 151 aa3.89□□□□□ -1.79
GDE1YPL110C TKL2P33315 681 aa3.89□□□□□ -1.79
GDE1YPL110C ATG12P38316 186 aa3.89□□□□□ -1.79
GDE1YPL110C PHO89P38361 574 aa3.89□□□□□ -1.79
GDE1YPL110C FYV4P38783 130 aaPredicted RBP3.89□□□□□ -1.79
GDE1YPL110C PHS1P40857 217 aa3.89□□□□□ -1.79
GDE1YPL110C SNO3P43544 222 aa3.89□□□□□ -1.79
GDE1YPL110C PAU5P43575 122 aa3.89□□□□□ -1.79
GDE1YPL110C YFR020WP43600 232 aa3.89□□□□□ -1.79
GDE1YPL110C CTK2P46962 323 aa3.89□□□□□ -1.79
GDE1YPL110C YGR164WP53291 111 aa3.89□□□□□ -1.79
GDE1YPL110C SNO2P53823 222 aa3.89□□□□□ -1.79
GDE1YPL110C FCF1Q05498 189 aaPredicted RBP3.89□□□□□ -1.79
GDE1YPL110C INM2Q05533 292 aa3.89□□□□□ -1.79
GDE1YPL110C RDL2Q08742 149 aaKnown RBP3.89□□□□□ -1.79
GDE1YPL110C SWM1Q12379 170 aa3.89□□□□□ -1.79
GDE1YPL110C RPL12AP0CX53 165 aaKnown RBP3.89□□□□□ -1.79
GDE1YPL110C RPL12BP0CX54 165 aa3.89□□□□□ -1.79
GDE1YPL110C HMRA1P0CY11 126 aa3.89□□□□□ -1.79
GDE1YPL110C PHO85P17157 305 aa3.89□□□□□ -1.79
GDE1YPL110C COX13P32799 129 aa3.89□□□□□ -1.79
GDE1YPL110C YGL015CP33199 130 aa3.89□□□□□ -1.79
GDE1YPL110C IRC22P40006 225 aa3.89□□□□□ -1.79
GDE1YPL110C YIR007WP40566 764 aa3.89□□□□□ -1.79
GDE1YPL110C TTI2P47168 421 aa3.89□□□□□ -1.79
GDE1YPL110C SCW4P53334 386 aaKnown RBP3.89□□□□□ -1.79
GDE1YPL110C DGA1Q08650 418 aa3.89□□□□□ -1.79
GDE1YPL110C PUP3P25451 205 aaKnown RBP3.89□□□□□ -1.79
GDE1YPL110C MKK1P32490 508 aa3.89□□□□□ -1.79
GDE1YPL110C IES6P32617 166 aa3.89□□□□□ -1.79
GDE1YPL110C YSC83P32792 385 aa3.89□□□□□ -1.79
GDE1YPL110C LYS1P38998 373 aaRIP-Chip data3.89□□□□□ -1.79not detected
GDE1YPL110C NSA2P40078 261 aaKnown RBP3.89□□□□□ -1.79
GDE1YPL110C CUP9P41817 306 aa3.89□□□□□ -1.79
GDE1YPL110C WSC2P53832 503 aa3.89□□□□□ -1.79
GDE1YPL110C STP3Q05937 343 aa3.89□□□□□ -1.79
GDE1YPL110C PBI2P0CT04 75 aaKnown RBP3.88□□□□□ -1.79
GDE1YPL110C CDC43P18898 376 aa3.88□□□□□ -1.79
GDE1YPL110C VMA11P32842 164 aa3.88□□□□□ -1.79
GDE1YPL110C MIX23P38162 196 aa3.88□□□□□ -1.79
GDE1YPL110C EMC5P40540 141 aa3.88□□□□□ -1.79
GDE1YPL110C YJL213WP40896 331 aa3.88□□□□□ -1.79
GDE1YPL110C GEP7P53171 287 aa3.88□□□□□ -1.79
GDE1YPL110C MRP10O75012 95 aa3.88□□□□□ -1.79
GDE1YPL110C ADK1P07170 222 aaKnown RBP3.88□□□□□ -1.79
GDE1YPL110C YLL053CP0CD98 152 aa3.88□□□□□ -1.79
GDE1YPL110C PAM16P42949 149 aa3.88□□□□□ -1.79
GDE1YPL110C SCD6P45978 349 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms