RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W YGL015CP33199 130 aa8.25□□□□□ -1.09
PRE6YOL038W SRY1P36007 326 aa8.25□□□□□ -1.09
PRE6YOL038W RRF1P38771 230 aa8.25□□□□□ -1.09
PRE6YOL038W GEP4P38812 185 aa8.25□□□□□ -1.09
PRE6YOL038W YHR138CP38841 114 aaPredicted RBP8.25□□□□□ -1.09
PRE6YOL038W FLO5P38894 1075 aa8.25□□□□□ -1.09
PRE6YOL038W YGR210CP42942 411 aa8.25□□□□□ -1.09
PRE6YOL038W PRM3Q08931 133 aa8.25□□□□□ -1.09
PRE6YOL038W QCR2P07257 368 aa8.24□□□□□ -1.09
PRE6YOL038W UTR5P32630 166 aa8.24□□□□□ -1.09
PRE6YOL038W PPQ1P32945 549 aa8.24□□□□□ -1.09
PRE6YOL038W YKL075CP36083 450 aa8.24□□□□□ -1.09
PRE6YOL038W YPT31P38555 223 aaKnown RBP8.24□□□□□ -1.09
PRE6YOL038W NIF3P53081 288 aa8.24□□□□□ -1.09
PRE6YOL038W YGR219WP53307 113 aa8.24□□□□□ -1.09
PRE6YOL038W TDH1P00360 332 aaKnown RBP8.23□□□□□ -1.09
PRE6YOL038W GRX2P17695 143 aaKnown RBP8.23□□□□□ -1.09
PRE6YOL038W HED1Q03937 162 aa8.23□□□□□ -1.09
PRE6YOL038W FSH2Q05015 223 aa8.23□□□□□ -1.09
PRE6YOL038W RKI1Q12189 258 aa8.23□□□□□ -1.09
PRE6YOL038W ERV1P27882 189 aa8.22□□□□□ -1.09
PRE6YOL038W YRA2P36036 203 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
PRE6YOL038W LSM12P38828 187 aaKnown RBP8.22□□□□□ -1.09
PRE6YOL038W GRH1Q04410 372 aaKnown RBP8.22□□□□□ -1.09
PRE6YOL038W PAM18Q07914 168 aa8.22□□□□□ -1.09
PRE6YOL038W FEX1Q08913 375 aa8.22□□□□□ -1.09
PRE6YOL038W HBN1Q96VH4 193 aa8.22□□□□□ -1.09
PRE6YOL038W ERV15P38312 142 aa8.21□□□□□ -1.1
PRE6YOL038W BOL3P39724 118 aa8.21□□□□□ -1.1
PRE6YOL038W YIR035CP40579 254 aa8.21□□□□□ -1.1
PRE6YOL038W YPR013CQ12145 317 aa8.21□□□□□ -1.1
PRE6YOL038W YCT1Q12235 531 aa8.21□□□□□ -1.1
PRE6YOL038W TAR1Q8TGM6 124 aa8.21□□□□□ -1.1
PRE6YOL038W TPI1P00942 248 aaKnown RBP8.2□□□□□ -1.1
PRE6YOL038W PUT1P09368 476 aa8.2□□□□□ -1.1
PRE6YOL038W ACB1P31787 87 aa8.2□□□□□ -1.1
PRE6YOL038W IMD2P38697 523 aaKnown RBP8.2□□□□□ -1.1
PRE6YOL038W YAR068WP39564 161 aa8.2□□□□□ -1.1
PRE6YOL038W RPL13BP40212 199 aaKnown RBP8.2□□□□□ -1.1
PRE6YOL038W SWM2P40342 146 aa8.2□□□□□ -1.1
PRE6YOL038W RFC2P40348 353 aa8.2□□□□□ -1.1
PRE6YOL038W MRPL49P40858 161 aaPredicted RBP8.2□□□□□ -1.1
PRE6YOL038W BUL1P48524 976 aa8.2□□□□□ -1.1
PRE6YOL038W ACT1P60010 375 aaKnown RBP8.2□□□□□ -1.1
PRE6YOL038W VPS28Q02767 242 aa8.2□□□□□ -1.1
PRE6YOL038W RPL13AQ12690 199 aaPredicted RBP8.2□□□□□ -1.1
PRE6YOL038W PET494P07390 489 aaPredicted RBP8.19□□□□□ -1.1
PRE6YOL038W YPC1P38298 316 aa8.19□□□□□ -1.1
PRE6YOL038W YJR012CP47087 207 aa8.19□□□□□ -1.1
PRE6YOL038W CAX4P53223 239 aa8.19□□□□□ -1.1
PRE6YOL038W CPD1P53314 239 aa8.19□□□□□ -1.1
PRE6YOL038W MRPL50P53724 139 aa8.19□□□□□ -1.1
PRE6YOL038W MAG1P22134 296 aaKnown RBP8.18□□□□□ -1.1
PRE6YOL038W YBR184WP38299 523 aa8.18□□□□□ -1.1
PRE6YOL038W MIC12P38341 106 aa8.18□□□□□ -1.1
PRE6YOL038W YER137CP40083 148 aaKnown RBP8.18□□□□□ -1.1
PRE6YOL038W ERG25P53045 309 aa8.18□□□□□ -1.1
PRE6YOL038W CAB4P53332 305 aa8.18□□□□□ -1.1
PRE6YOL038W MSO1P53604 210 aaKnown RBP8.18□□□□□ -1.1
PRE6YOL038W EST3Q03096 181 aa8.18□□□□□ -1.1
PRE6YOL038W MSC3Q05812 728 aa8.18□□□□□ -1.1
PRE6YOL038W YNL194CP40169 301 aa8.17□□□□□ -1.1
PRE6YOL038W DYN2Q02647 92 aa8.17□□□□□ -1.1
PRE6YOL038W YLR281CQ05863 155 aa8.17□□□□□ -1.1
PRE6YOL038W ATG31Q12421 196 aa8.17□□□□□ -1.1
PRE6YOL038W TRP4P07285 380 aaPredicted RBP8.16□□□□□ -1.1
PRE6YOL038W RPS8AP0CX39 200 aaKnown RBP8.16□□□□□ -1.1
PRE6YOL038W RPS8BP0CX40 200 aaKnown RBP8.16□□□□□ -1.1
PRE6YOL038W TIP1P27654 210 aaPredicted RBP8.16□□□□□ -1.1
PRE6YOL038W PDC2P32896 925 aa8.16□□□□□ -1.1
PRE6YOL038W PKP2P53170 491 aa8.16□□□□□ -1.1
PRE6YOL038W PLP1Q04004 230 aa8.16□□□□□ -1.1
PRE6YOL038W YLR146W-AQ2V2P1 62 aa8.16□□□□□ -1.1
PRE6YOL038W YGL258W-AQ3E740 77 aa8.16□□□□□ -1.1
PRE6YOL038W SRL3P36167 246 aa8.15□□□□□ -1.1
PRE6YOL038W ECM27P47144 725 aa8.15□□□□□ -1.1
PRE6YOL038W YGR050CP53231 118 aa8.15□□□□□ -1.1
PRE6YOL038W SWT21P53873 357 aaPredicted RBP8.15□□□□□ -1.1
PRE6YOL038W GPI15P53961 229 aa8.15□□□□□ -1.1
PRE6YOL038W DID2P69771 204 aa8.15□□□□□ -1.1
PRE6YOL038W YLR224WQ05947 369 aa8.15□□□□□ -1.1
PRE6YOL038W YNG1Q08465 219 aa8.15□□□□□ -1.1
PRE6YOL038W URA5P13298 226 aaKnown RBP8.14□□□□□ -1.11
PRE6YOL038W CKS1P20486 150 aaKnown RBP8.14□□□□□ -1.11
PRE6YOL038W SDH4P37298 181 aa8.14□□□□□ -1.11
PRE6YOL038W YDR274CP87283 123 aa8.14□□□□□ -1.11
PRE6YOL038W SCW10Q04951 389 aa8.14□□□□□ -1.11
PRE6YOL038W RXT3Q07458 294 aa8.14□□□□□ -1.11
PRE6YOL038W RRT7Q07829 113 aa8.14□□□□□ -1.11
PRE6YOL038W ISN1Q99312 450 aa8.14□□□□□ -1.11
PRE6YOL038W QDR3P38227 689 aa8.13□□□□□ -1.11
PRE6YOL038W SSU72P53538 206 aaPredicted RBP8.13□□□□□ -1.11
PRE6YOL038W YOR352WQ08816 343 aa8.13□□□□□ -1.11
PRE6YOL038W ECM33P38248 429 aaKnown RBP8.12□□□□□ -1.11
PRE6YOL038W MPC2P38857 129 aa8.12□□□□□ -1.11
PRE6YOL038W SNU13P39990 126 aaKnown RBP8.12□□□□□ -1.11
PRE6YOL038W PNC1P53184 216 aaKnown RBP8.12□□□□□ -1.11
PRE6YOL038W FCF2Q12035 217 aaPredicted RBP8.12□□□□□ -1.11
PRE6YOL038W MRS3P10566 314 aa8.11□□□□□ -1.11
PRE6YOL038W RTC3P38804 111 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms