RNA–Protein interactions for RNA: YNL325C

FIG4, Transcript of Phosphatidylinositol 3,5-bisphosphate (PtdIns[3,5]P) phosphatase, yeast

Gene FIG4, Length 2,640 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FIG4	YNL325C	YNG1	Q08465	219 aa		0.74	□□□□□ -2.29
FIG4	YNL325C	MSW1	P04803	379 aa		0.74	□□□□□ -2.29
FIG4	YNL325C	URA6	P15700	204 aa		0.74	□□□□□ -2.29
FIG4	YNL325C	PET9	P18239	318 aa	Known RBP	0.74	□□□□□ -2.29
FIG4	YNL325C	MSN4	P33749	630 aa		0.74	□□□□□ -2.29
FIG4	YNL325C	ERG28	P40030	148 aa		0.74	□□□□□ -2.29
FIG4	YNL325C	ICE2	P40499	491 aa		0.74	□□□□□ -2.29
FIG4	YNL325C	BAT2	P47176	376 aa	Known RBP	0.74	□□□□□ -2.29
FIG4	YNL325C	BOL2	P53082	120 aa		0.74	□□□□□ -2.29
FIG4	YNL325C	PRM8	P53174	237 aa		0.74	□□□□□ -2.29
FIG4	YNL325C	YGR219W	P53307	113 aa		0.74	□□□□□ -2.29
FIG4	YNL325C	RUD3	Q12234	484 aa	Known RBP	0.74	□□□□□ -2.29
FIG4	YNL325C	CDC8	P00572	216 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	DBF2	P22204	572 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	SSO1	P32867	290 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	YHR022C	P38763	256 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	DOG2	P38773	246 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	DSE2	P38844	325 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	PEP8	P40335	379 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	TIR3	P40552	269 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	NUP57	P48837	541 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	ALG13	P53178	202 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	YGR050C	P53231	118 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	FYV6	P53913	173 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	PET191	Q02772	108 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	GAS3	Q03655	524 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	SPG3	Q04398	127 aa	Predicted RBP	0.73	□□□□□ -2.29
FIG4	YNL325C	GGA1	Q06336	557 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	ATO3	Q12359	275 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	CDC39	P25655	2108 aa	Known RBP	0.73	□□□□□ -2.29
FIG4	YNL325C	ARG80	P07249	177 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	YBR121C-A	P0C5L4	52 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	FCY2	P17064	533 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	VMA11	P32842	164 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	KDX1	P36005	433 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	MIC12	P38341	106 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	AVT2	P39981	480 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	COX15	P40086	486 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	BMT5	P40493	336 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	SWP1	Q02795	286 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	YDR249C	Q03787	373 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	MCP1	Q12106	302 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	CSF1	Q12150	2958 aa		0.73	□□□□□ -2.29
FIG4	YNL325C	CDC28	P00546	298 aa	Known RBP	0.72	□□□□□ -2.29
FIG4	YNL325C	RPL27B	P0C2H7	136 aa	Known RBP	0.72	□□□□□ -2.29
FIG4	YNL325C	YJL197C-A	P0C5P0	93 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	YLR156W	P0CE96	114 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	YLR159W	P0CE97	114 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	YLR161W	P0CE98	114 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	PPA2	P28239	310 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	BMH2	P34730	273 aa	Known RBP	0.72	□□□□□ -2.29
FIG4	YNL325C	APS1	P35181	156 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
FIG4	YNL325C	UTP30	P36144	274 aa	Known RBP	0.72	□□□□□ -2.29
FIG4	YNL325C	MRPL17	P36528	281 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	UMP1	P38293	148 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	POP4	P38336	279 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	YAR068W	P39564	161 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	CIS3	P47001	227 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	CWC23	P52868	283 aa	Predicted RBP	0.72	□□□□□ -2.29
FIG4	YNL325C	PDR17	P53844	350 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	PGA2	P53903	129 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	YDR248C	Q03786	193 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	FSF1	Q12029	327 aa	Known RBP	0.72	□□□□□ -2.29
FIG4	YNL325C	YDR157W	A0A023PZE8	133 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	MDH2	P22133	377 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
FIG4	YNL325C	UPS2	P35200	230 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	TVP38	P36164	337 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	PGD1	P40356	397 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	YRB2	P40517	327 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	YIL001W	P40560	513 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	AIF1	P52923	378 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	CYT2	Q00873	224 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	SSQ1	Q05931	657 aa	Predicted RBP	0.72	□□□□□ -2.29
FIG4	YNL325C	YCL012C	Q8J0M4	134 aa		0.72	□□□□□ -2.29
FIG4	YNL325C	CDC33	P07260	213 aa	Known RBP	0.71	□□□□□ -2.3
FIG4	YNL325C	COQ1	P18900	473 aa		0.71	□□□□□ -2.3
FIG4	YNL325C	PRP18	P33411	251 aa	Predicted RBP	0.71	□□□□□ -2.3
FIG4	YNL325C	IKI1	P38874	309 aa		0.71	□□□□□ -2.3
FIG4	YNL325C	RPS29A	P41057	56 aa	Known RBP	0.71	□□□□□ -2.3
FIG4	YNL325C	BXI1	P48558	297 aa		0.71	□□□□□ -2.3
FIG4	YNL325C	ERG25	P53045	309 aa		0.71	□□□□□ -2.3
FIG4	YNL325C	BUD25	P85052	153 aa		0.71	□□□□□ -2.3
FIG4	YNL325C	SML1	Q04964	104 aa		0.71	□□□□□ -2.3
FIG4	YNL325C	NHP6B	P11633	99 aa	Known RBP	0.71	□□□□□ -2.3
FIG4	YNL325C	RPB4	P20433	221 aa	Predicted RBP	0.71	□□□□□ -2.3
FIG4	YNL325C	MRPL15	P36523	253 aa		0.71	□□□□□ -2.3
FIG4	YNL325C	YBR220C	P38318	560 aa		0.71	□□□□□ -2.3
FIG4	YNL325C	RPL33B	P41056	107 aa	Known RBP	0.71	□□□□□ -2.3
FIG4	YNL325C	ERG10	P41338	398 aa	Known RBP	0.71	□□□□□ -2.3
FIG4	YNL325C	ADO1	P47143	340 aa	Known RBP	0.71	□□□□□ -2.3
FIG4	YNL325C	POP3	P53833	195 aa	Predicted RBP	0.71	□□□□□ -2.3
FIG4	YNL325C	COG5	P53951	403 aa		0.71	□□□□□ -2.3
FIG4	YNL325C	YLR162W	Q06235	118 aa		0.71	□□□□□ -2.3
FIG4	YNL325C	TSC3	Q3E790	80 aa		0.71	□□□□□ -2.3
FIG4	YNL325C	YPR170W-B	P0C5R9	85 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	GCN3	P14741	305 aa		0.7	□□□□□ -2.3
FIG4	YNL325C	RPB3	P16370	318 aa	Known RBP	0.7	□□□□□ -2.3
FIG4	YNL325C	ATP15	P21306	62 aa		0.7	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms