RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeast

Gene SWS2, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWS2	YNL081C	YFL065C	P43539	102 aa		0.84	□□□□□ -2.27
SWS2	YNL081C	HNT1	Q04344	158 aa	Known RBP	0.84	□□□□□ -2.27
SWS2	YNL081C	YNG1	Q08465	219 aa		0.84	□□□□□ -2.27
SWS2	YNL081C	YRA1	Q12159	226 aa	Known RBP	0.84	□□□□□ -2.27
SWS2	YNL081C	RAD9	P14737	1309 aa		0.84	□□□□□ -2.28
SWS2	YNL081C	RPL35A	P0CX84	120 aa	Known RBP	0.83	□□□□□ -2.28
SWS2	YNL081C	RPL35B	P0CX85	120 aa	Known RBP	0.83	□□□□□ -2.28
SWS2	YNL081C	RAD51	P25454	400 aa		0.83	□□□□□ -2.28
SWS2	YNL081C	RME1	P32338	300 aa	Known RBP	0.83	□□□□□ -2.28
SWS2	YNL081C	GET1	P53192	235 aa		0.83	□□□□□ -2.28
SWS2	YNL081C	AIM36	Q03798	255 aa		0.83	□□□□□ -2.28
SWS2	YNL081C	SMD2	Q06217	110 aa	Known RBP	0.83	□□□□□ -2.28
SWS2	YNL081C	GGA1	Q06336	557 aa		0.83	□□□□□ -2.28
SWS2	YNL081C	GRE1	Q08969	168 aa		0.83	□□□□□ -2.28
SWS2	YNL081C	IKI3	Q06706	1349 aa	Known RBP	0.83	□□□□□ -2.28
SWS2	YNL081C	POR1	P04840	283 aa	Known RBP	0.82	□□□□□ -2.28
SWS2	YNL081C	ATP7	P30902	174 aa		0.82	□□□□□ -2.28
SWS2	YNL081C	ARC19	P33204	171 aa	Known RBP	0.82	□□□□□ -2.28
SWS2	YNL081C	YPL073C	P40323	161 aa		0.82	□□□□□ -2.28
SWS2	YNL081C	ARO80	Q04052	950 aa		0.82	□□□□□ -2.28
SWS2	YNL081C	GIM5	Q04493	163 aa		0.82	□□□□□ -2.28
SWS2	YNL081C	YPR174C	Q06616	221 aa	Predicted RBP	0.82	□□□□□ -2.28
SWS2	YNL081C	SPO13	P23624	291 aa		0.81	□□□□□ -2.28
SWS2	YNL081C	YCR090C	P25654	182 aa	Known RBP	0.81	□□□□□ -2.28
SWS2	YNL081C	EGD2	P38879	174 aa	Known RBP	0.81	□□□□□ -2.28
SWS2	YNL081C	AIM2	P39721	246 aa		0.81	□□□□□ -2.28
SWS2	YNL081C	POG1	P40473	351 aa		0.81	□□□□□ -2.28
SWS2	YNL081C	MMS2	P53152	137 aa		0.81	□□□□□ -2.28
SWS2	YNL081C	HOP2	P53187	214 aa		0.81	□□□□□ -2.28
SWS2	YNL081C	MPC3	P53311	146 aa		0.81	□□□□□ -2.28
SWS2	YNL081C	FUS2	Q05670	677 aa		0.81	□□□□□ -2.28
SWS2	YNL081C	DGA1	Q08650	418 aa		0.81	□□□□□ -2.28
SWS2	YNL081C	ODC2	Q99297	307 aa		0.81	□□□□□ -2.28
SWS2	YNL081C	MDM35	O60200	86 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	MRS1	P07266	363 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	YHR212W-A	P0CX91	67 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	CNB1	P25296	175 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	OCH1	P31755	480 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	PAN3	P36102	679 aa	Predicted RBP	0.8	□□□□□ -2.28
SWS2	YNL081C	YKR041W	P36134	250 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	FMP23	P38231	175 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	SEC72	P39742	193 aa	Known RBP	0.8	□□□□□ -2.28
SWS2	YNL081C	YEA4	P40004	342 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	HYR1	P40581	163 aa	Known RBP	0.8	□□□□□ -2.28
SWS2	YNL081C	UBC12	P52491	188 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	JAC1	P53193	184 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	YIP3	P53633	176 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	YNL184C	P53876	108 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	NRK1	P53915	240 aa		0.8	□□□□□ -2.28
SWS2	YNL081C	MBF1	O14467	151 aa	Known RBP	0.79	□□□□□ -2.28
SWS2	YNL081C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
SWS2	YNL081C	ARO7	P32178	256 aa		0.79	□□□□□ -2.28
SWS2	YNL081C	CLG1	P35190	452 aa		0.79	□□□□□ -2.28
SWS2	YNL081C	MAK5	P38112	773 aa	Predicted RBP	0.79	□□□□□ -2.28
SWS2	YNL081C	SHG1	P38337	142 aa		0.79	□□□□□ -2.28
SWS2	YNL081C	YER121W	P40076	114 aa		0.79	□□□□□ -2.28
SWS2	YNL081C	YNL247W	P53852	767 aa	Known RBP	0.79	□□□□□ -2.28
SWS2	YNL081C	YNL140C	P53910	189 aa		0.79	□□□□□ -2.28
SWS2	YNL081C	YLR460C	P54007	376 aa		0.79	□□□□□ -2.28
SWS2	YNL081C	SNO1	Q03144	224 aa		0.79	□□□□□ -2.28
SWS2	YNL081C	YMR099C	Q03161	297 aa	Known RBP	0.79	□□□□□ -2.28
SWS2	YNL081C	YMR315W	Q04869	349 aa	Known RBP	0.79	□□□□□ -2.28
SWS2	YNL081C	GRX8	Q05926	109 aa		0.79	□□□□□ -2.28
SWS2	YNL081C	NOC4	Q06512	552 aa	Predicted RBP	0.79	□□□□□ -2.28
SWS2	YNL081C	CMC2	Q3E7A4	109 aa		0.79	□□□□□ -2.28
SWS2	YNL081C	TRR1	P29509	319 aa	Known RBP	0.78	□□□□□ -2.28
SWS2	YNL081C	CAF4	P36130	643 aa		0.78	□□□□□ -2.28
SWS2	YNL081C	PDS1	P40316	373 aa	Predicted RBP	0.78	□□□□□ -2.28
SWS2	YNL081C	ARP3	P47117	449 aa	Known RBP	0.78	□□□□□ -2.28
SWS2	YNL081C	RTC4	P53850	401 aa		0.78	□□□□□ -2.28
SWS2	YNL081C	YMR295C	Q03559	197 aa		0.78	□□□□□ -2.28
SWS2	YNL081C	YOL014W	Q08110	124 aa		0.78	□□□□□ -2.28
SWS2	YNL081C	YOL024W	Q08172	172 aa		0.78	□□□□□ -2.28
SWS2	YNL081C	IGO2	Q9P305	131 aa		0.78	□□□□□ -2.28
SWS2	YNL081C	TAH1	P25638	111 aa	Predicted RBP	0.77	□□□□□ -2.29
SWS2	YNL081C	UBC6	P33296	250 aa	Predicted RBP	0.77	□□□□□ -2.29
SWS2	YNL081C	VPS51	P36116	164 aa		0.77	□□□□□ -2.29
SWS2	YNL081C	FES1	P38260	290 aa		0.77	□□□□□ -2.29
SWS2	YNL081C	NVJ1	P38881	321 aa		0.77	□□□□□ -2.29
SWS2	YNL081C	YER134C	P40081	178 aa		0.77	□□□□□ -2.29
SWS2	YNL081C	SER2	P42941	309 aa		0.77	□□□□□ -2.29
SWS2	YNL081C	YFH7	P43591	353 aa		0.77	□□□□□ -2.29
SWS2	YNL081C	SKI6	P46948	246 aa	Predicted RBP	0.77	□□□□□ -2.29
SWS2	YNL081C	HSK3	P69852	69 aa		0.77	□□□□□ -2.29
SWS2	YNL081C	DYN3	Q04949	312 aa		0.77	□□□□□ -2.29
SWS2	YNL081C	YET3	Q07451	203 aa		0.77	□□□□□ -2.29
SWS2	YNL081C	IRC23	Q08416	157 aa		0.77	□□□□□ -2.29
SWS2	YNL081C	SLH1	P53327	1967 aa	Known RBP	0.77	□□□□□ -2.29
SWS2	YNL081C	YAR023C	D6VPM8	179 aa		0.76	□□□□□ -2.29
SWS2	YNL081C	SNF4	P12904	322 aa		0.76	□□□□□ -2.29
SWS2	YNL081C	TRX3	P25372	127 aa		0.76	□□□□□ -2.29
SWS2	YNL081C	MGT1	P26188	188 aa		0.76	□□□□□ -2.29
SWS2	YNL081C	SRP14	P38985	146 aa		0.76	□□□□□ -2.29
SWS2	YNL081C	YJR111C	P47148	283 aa	Known RBP	0.76	□□□□□ -2.29
SWS2	YNL081C	EFM5	P53200	248 aa	Known RBP	0.76	□□□□□ -2.29
SWS2	YNL081C	PGA1	P53896	198 aa		0.76	□□□□□ -2.29
SWS2	YNL081C	SHH3	Q04487	196 aa		0.76	□□□□□ -2.29
SWS2	YNL081C	PRP11	Q07350	266 aa	Predicted RBP	0.76	□□□□□ -2.29
SWS2	YNL081C	YLR036C	Q07986	203 aa		0.76	□□□□□ -2.29
SWS2	YNL081C	BRX1	Q08235	291 aa	Known RBP	0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms