RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C RPL21BQ12672 160 aaKnown RBP2.51□□□□□ -2.01
SSN8YNL025C NAG1Q8TGN9 163 aa2.51□□□□□ -2.01
SSN8YNL025C FMP49A0A023PZB3 126 aa2.5□□□□□ -2.01
SSN8YNL025C ADH1P00330 348 aaKnown RBP2.5□□□□□ -2.01
SSN8YNL025C Q0255P03881 472 aa2.5□□□□□ -2.01
SSN8YNL025C HAP2P06774 265 aa2.5□□□□□ -2.01
SSN8YNL025C SPS2P08459 502 aa2.5□□□□□ -2.01
SSN8YNL025C URA5P13298 226 aaKnown RBP2.5□□□□□ -2.01
SSN8YNL025C ANB1P19211 157 aa2.5□□□□□ -2.01
SSN8YNL025C BET1P22804 142 aa2.5□□□□□ -2.01
SSN8YNL025C CSE2P33308 149 aa2.5□□□□□ -2.01
SSN8YNL025C LHP1P33399 275 aaKnown RBP2.5□□□□□ -2.01
SSN8YNL025C PTC1P35182 281 aa2.5□□□□□ -2.01
SSN8YNL025C MRPL15P36523 253 aa2.5□□□□□ -2.01
SSN8YNL025C RPF1P38805 295 aaKnown RBP2.5□□□□□ -2.01
SSN8YNL025C NSG1P38837 291 aa2.5□□□□□ -2.01
SSN8YNL025C TIM17P39515 158 aa2.5□□□□□ -2.01
SSN8YNL025C PRE5P40302 234 aaKnown RBP2.5□□□□□ -2.01
SSN8YNL025C YIL054WP40524 105 aa2.5□□□□□ -2.01
SSN8YNL025C PFS2P42841 465 aaKnown RBP2.5□□□□□ -2.01
SSN8YNL025C YAE1P47118 141 aaPredicted RBP2.5□□□□□ -2.01
SSN8YNL025C ORM1P53224 222 aa2.5□□□□□ -2.01
SSN8YNL025C FMP48P53233 369 aa2.5□□□□□ -2.01
SSN8YNL025C CAB4P53332 305 aa2.5□□□□□ -2.01
SSN8YNL025C YNL033WP53964 284 aa2.5□□□□□ -2.01
SSN8YNL025C YNL019CP53975 284 aa2.5□□□□□ -2.01
SSN8YNL025C VPS71Q03433 280 aa2.5□□□□□ -2.01
SSN8YNL025C SPG3Q04398 127 aaPredicted RBP2.5□□□□□ -2.01
SSN8YNL025C FMP42Q04991 504 aa2.5□□□□□ -2.01
SSN8YNL025C YPL264CQ08980 353 aa2.5□□□□□ -2.01
SSN8YNL025C YPL162CQ12042 273 aa2.5□□□□□ -2.01
SSN8YNL025C SPC3Q12133 184 aa2.5□□□□□ -2.01
SSN8YNL025C SMT3Q12306 101 aaKnown RBP2.5□□□□□ -2.01
SSN8YNL025C PST1Q12355 444 aa2.5□□□□□ -2.01
SSN8YNL025C YLR412C-AQ3E742 68 aa2.5□□□□□ -2.01
SSN8YNL025C BOL1Q3E793 110 aa2.5□□□□□ -2.01
SSN8YNL025C IRC20Q06554 1556 aa2.49□□□□□ -2.01
SSN8YNL025C TRP1P00912 224 aa2.49□□□□□ -2.01
SSN8YNL025C ATP5P09457 212 aa2.49□□□□□ -2.01
SSN8YNL025C RPS8AP0CX39 200 aaKnown RBP2.49□□□□□ -2.01
SSN8YNL025C RPS8BP0CX40 200 aaKnown RBP2.49□□□□□ -2.01
SSN8YNL025C LDB16P25587 256 aa2.49□□□□□ -2.01
SSN8YNL025C RNP1P32385 249 aa2.49□□□□□ -2.01
SSN8YNL025C SHB17P36136 271 aaKnown RBP2.49□□□□□ -2.01
SSN8YNL025C SHE1P38200 338 aa2.49□□□□□ -2.01
SSN8YNL025C YHL026CP38740 315 aa2.49□□□□□ -2.01
SSN8YNL025C IRC22P40006 225 aa2.49□□□□□ -2.01
SSN8YNL025C MOB1P40484 314 aa2.49□□□□□ -2.01
SSN8YNL025C CRH1P53301 507 aa2.49□□□□□ -2.01
SSN8YNL025C SWT21P53873 357 aaPredicted RBP2.49□□□□□ -2.01
SSN8YNL025C GAS3Q03655 524 aa2.49□□□□□ -2.01
SSN8YNL025C INP1Q03694 420 aa2.49□□□□□ -2.01
SSN8YNL025C NAT3Q06504 195 aa2.49□□□□□ -2.01
SSN8YNL025C AYT1Q12226 474 aa2.49□□□□□ -2.01
SSN8YNL025C YFR032C-BQ8TGU2 87 aa2.49□□□□□ -2.01
SSN8YNL025C YLR419WQ06698 1435 aaKnown RBP2.49□□□□□ -2.01
SSN8YNL025C YEL009C-AA0A023PZF2 135 aa2.48□□□□□ -2.01
SSN8YNL025C RPL42AP0CX27 106 aaKnown RBP2.48□□□□□ -2.01
SSN8YNL025C RPL42BP0CX28 106 aaKnown RBP2.48□□□□□ -2.01
SSN8YNL025C RPB3P16370 318 aaKnown RBP2.48□□□□□ -2.01
SSN8YNL025C GGC1P38988 300 aa2.48□□□□□ -2.01
SSN8YNL025C PTI1P39927 425 aaPredicted RBP2.48□□□□□ -2.01
SSN8YNL025C YER181CP40097 107 aa2.48□□□□□ -2.01
SSN8YNL025C FIS1P40515 155 aa2.48□□□□□ -2.01
SSN8YNL025C YJR085CP47131 105 aaKnown RBP2.48□□□□□ -2.01
SSN8YNL025C YGR219WP53307 113 aa2.48□□□□□ -2.01
SSN8YNL025C APJ1P53940 528 aa2.48□□□□□ -2.01
SSN8YNL025C RPL21AQ02753 160 aaKnown RBP2.48□□□□□ -2.01
SSN8YNL025C NIP7Q08962 181 aaKnown RBP2.48□□□□□ -2.01
SSN8YNL025C YPR011CQ12251 326 aa2.48□□□□□ -2.01
SSN8YNL025C DGK1Q12382 290 aa2.48□□□□□ -2.01
SSN8YNL025C SAS5Q99314 248 aa2.48□□□□□ -2.01
SSN8YNL025C SRB8P25648 1427 aa2.48□□□□□ -2.01
SSN8YNL025C YHR139C-AO13536 103 aa2.47□□□□□ -2.01
SSN8YNL025C YPR170W-BP0C5R9 85 aa2.47□□□□□ -2.01
SSN8YNL025C SEC59P20048 519 aa2.47□□□□□ -2.01
SSN8YNL025C YCR025CP25352 136 aa2.47□□□□□ -2.01
SSN8YNL025C VMA11P32842 164 aa2.47□□□□□ -2.01
SSN8YNL025C YOR062CP36025 268 aa2.47□□□□□ -2.01
SSN8YNL025C FMP46P36141 133 aaKnown RBP2.47□□□□□ -2.01
SSN8YNL025C ETR1P38071 380 aa2.47□□□□□ -2.01
SSN8YNL025C OM14P38325 134 aa2.47□□□□□ -2.01
SSN8YNL025C AIM18P38884 321 aa2.47□□□□□ -2.01
SSN8YNL025C YAR068WP39564 161 aa2.47□□□□□ -2.01
SSN8YNL025C SFT1P43682 97 aa2.47□□□□□ -2.01
SSN8YNL025C FIP1P45976 327 aa2.47□□□□□ -2.01
SSN8YNL025C YJL028WP47062 111 aa2.47□□□□□ -2.01
SSN8YNL025C COS10P52924 374 aa2.47□□□□□ -2.01
SSN8YNL025C YGL193CP53097 103 aa2.47□□□□□ -2.01
SSN8YNL025C RSM27P53305 110 aa2.47□□□□□ -2.01
SSN8YNL025C IRC25Q07951 179 aa2.47□□□□□ -2.01
SSN8YNL025C YBL112CQ3E7Y4 105 aa2.47□□□□□ -2.01
SSN8YNL025C YKL068W-AQ3E826 78 aa2.47□□□□□ -2.01
SSN8YNL025C YML100W-AQ8TGT0 57 aa2.47□□□□□ -2.01
SSN8YNL025C TSC11P40061 1430 aa2.47□□□□□ -2.01
SSN8YNL025C BUD4P47136 1447 aa2.47□□□□□ -2.01
SSN8YNL025C THO2P53552 1597 aaKnown RBP2.47□□□□□ -2.01
SSN8YNL025C SIN3P22579 1536 aa2.47□□□□□ -2.01
SSN8YNL025C YPK9Q12697 1472 aa2.46□□□□□ -2.02
SSN8YNL025C HYP2P23301 157 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 144.9 ms