RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT21	YMR179W	BOL1	Q3E793	110 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	ODC2	Q99297	307 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	ATG40	Q99325	256 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	ARO7	P32178	256 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	FZF1	P32805	299 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.78	□□□□□ -2.28	not detected
SPT21	YMR179W	MAK5	P38112	773 aa	Predicted RBP	0.78	□□□□□ -2.28
SPT21	YMR179W	DSE2	P38844	325 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	NVJ1	P38881	321 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	GAA1	P39012	614 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	YER076C	P40049	302 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	AYR1	P40471	297 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	MPC3	P53311	146 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	NUP49	Q02199	472 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	YMR099C	Q03161	297 aa	Known RBP	0.78	□□□□□ -2.28
SPT21	YMR179W	DYN3	Q04949	312 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	SML1	Q04964	104 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	NAT3	Q06504	195 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	MPD1	Q12404	318 aa	Known RBP	0.78	□□□□□ -2.28
SPT21	YMR179W	YML100W-A	Q8TGT0	57 aa		0.78	□□□□□ -2.28
SPT21	YMR179W	YLR236C	A0A023PZG4	107 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	QCR6	P00127	147 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	MDH2	P22133	377 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	YKL102C	P34249	101 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	YBR209W	P38311	105 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	AVT2	P39981	480 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	VTC1	P40046	129 aa	RIP-Chip data	0.77	□□□□□ -2.29	not detected
SPT21	YMR179W	LSM4	P40070	187 aa	Known RBP	0.77	□□□□□ -2.29
SPT21	YMR179W	YER121W	P40076	114 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	YER134C	P40081	178 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	BAT2	P47176	376 aa	Known RBP	0.77	□□□□□ -2.29
SPT21	YMR179W	GPI17	Q04080	534 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	SMD2	Q06217	110 aa	Known RBP	0.77	□□□□□ -2.29
SPT21	YMR179W	SHH4	Q06236	168 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	YPR014C	Q6B0W2	109 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	YAR023C	D6VPM8	179 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	SPO13	P23624	291 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	SEC14	P24280	304 aa	Known RBP	0.77	□□□□□ -2.29
SPT21	YMR179W	PEP8	P40335	379 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	TMA22	P47089	198 aa	Predicted RBP	0.77	□□□□□ -2.29
SPT21	YMR179W	SAY1	P53324	424 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	BUD25	P85052	153 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	YLR050C	Q12155	161 aa	Known RBP	0.77	□□□□□ -2.29
SPT21	YMR179W	PEX11	Q12462	236 aa		0.77	□□□□□ -2.29
SPT21	YMR179W	ARC19	P33204	171 aa	Known RBP	0.76	□□□□□ -2.29
SPT21	YMR179W	VMA22	P38784	181 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	MTW1	P39731	289 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	YFL019C	P43576	117 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	YFR054C	P43622	192 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	GPI14	P47088	403 aa	Known RBP	0.76	□□□□□ -2.29
SPT21	YMR179W	POP3	P53833	195 aa	Predicted RBP	0.76	□□□□□ -2.29
SPT21	YMR179W	VPS71	Q03433	280 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	HPT1	Q04178	221 aa	Known RBP	0.76	□□□□□ -2.29
SPT21	YMR179W	YOR342C	Q12182	319 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	MET5	P47169	1442 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	TIR1	P10863	254 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	TFC1	P32367	649 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	TVP38	P36164	337 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	FES1	P38260	290 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	NSG1	P38837	291 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	TVP23	P38962	199 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	ERJ5	P43613	295 aa	Predicted RBP	0.76	□□□□□ -2.29
SPT21	YMR179W	KNH1	P50112	268 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	ANT1	Q06497	328 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	RAD28	Q12021	506 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	DGK1	Q12382	290 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	YLR412C-A	Q3E742	68 aa		0.76	□□□□□ -2.29
SPT21	YMR179W	NSP1	P14907	823 aa	Known RBP	0.75	□□□□□ -2.29
SPT21	YMR179W	SEC11	P15367	167 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	RFC2	P40348	353 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	CUP9	P41817	306 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	SOL1	P50278	321 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	YMR295C	Q03559	197 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	PLP1	Q04004	230 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	CUE4	Q04201	117 aa	Predicted RBP	0.75	□□□□□ -2.29
SPT21	YMR179W	SHH3	Q04487	196 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	FYV12	Q08559	129 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	YDL180W	Q12301	547 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	CMD1	P06787	147 aa	Known RBP	0.75	□□□□□ -2.29
SPT21	YMR179W	QCR2	P07257	368 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	CPR5	P35176	225 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	YKR045C	P36138	183 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	PAM17	P36147	197 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	AME1	P38313	324 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	YBR219C	P38317	127 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	SPC25	P40014	221 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	NSA2	P40078	261 aa	Known RBP	0.75	□□□□□ -2.29
SPT21	YMR179W	HSK3	P69852	69 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	YMR253C	Q04835	414 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	IRC23	Q08416	157 aa		0.75	□□□□□ -2.29
SPT21	YMR179W	FLO9	P39712	1322 aa		0.74	□□□□□ -2.29
SPT21	YMR179W	PHO85	P17157	305 aa		0.74	□□□□□ -2.29
SPT21	YMR179W	TMA19	P35691	167 aa	Known RBP	0.74	□□□□□ -2.29
SPT21	YMR179W	YPL073C	P40323	161 aa		0.74	□□□□□ -2.29
SPT21	YMR179W	TTI2	P47168	421 aa		0.74	□□□□□ -2.29
SPT21	YMR179W	DIG2	Q03373	323 aa	Known RBP	0.74	□□□□□ -2.29
SPT21	YMR179W	YLR053C	Q12026	108 aa		0.74	□□□□□ -2.29
SPT21	YMR179W	RDI1	Q12434	202 aa		0.74	□□□□□ -2.29
SPT21	YMR179W	IDP1	P21954	428 aa	Known RBP	0.73	□□□□□ -2.29
SPT21	YMR179W	CSH1	P38287	376 aa		0.73	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms