RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C YPK2P18961 677 aa0.98□□□□□ -2.25
CMS1YLR003C VMA22P38784 181 aa0.98□□□□□ -2.25
CMS1YLR003C MTW1P39731 289 aa0.98□□□□□ -2.25
CMS1YLR003C YER134CP40081 178 aa0.98□□□□□ -2.25
CMS1YLR003C ERG10P41338 398 aaKnown RBP0.98□□□□□ -2.25
CMS1YLR003C ARO8P53090 500 aaKnown RBP0.98□□□□□ -2.25
CMS1YLR003C IRC23Q08416 157 aa0.98□□□□□ -2.25
CMS1YLR003C YAR023CD6VPM8 179 aa0.97□□□□□ -2.25
CMS1YLR003C CNB1P25296 175 aa0.97□□□□□ -2.25
CMS1YLR003C TRX3P25372 127 aa0.97□□□□□ -2.25
CMS1YLR003C YJR111CP47148 283 aaKnown RBP0.97□□□□□ -2.25
CMS1YLR003C YNL184CP53876 108 aa0.97□□□□□ -2.25
CMS1YLR003C DYN3Q04949 312 aa0.97□□□□□ -2.25
CMS1YLR003C SNF4P12904 322 aa0.96□□□□□ -2.26
CMS1YLR003C ASF2P32448 525 aaPredicted RBP0.96□□□□□ -2.26
CMS1YLR003C PAM17P36147 197 aa0.96□□□□□ -2.26
CMS1YLR003C YER034WP40022 185 aaKnown RBP0.96□□□□□ -2.26
CMS1YLR003C PDS1P40316 373 aaPredicted RBP0.96□□□□□ -2.26
CMS1YLR003C SKI6P46948 246 aaPredicted RBP0.96□□□□□ -2.26
CMS1YLR003C RTC4P53850 401 aa0.96□□□□□ -2.26
CMS1YLR003C YLR031WQ07978 186 aa0.96□□□□□ -2.26
CMS1YLR003C FAS1P07149 2051 aaKnown RBP0.96□□□□□ -2.26
CMS1YLR003C ACC1Q00955 2233 aaKnown RBP0.96□□□□□ -2.26
CMS1YLR003C MDM35O60200 86 aa0.95□□□□□ -2.26
CMS1YLR003C VAR1P02381 398 aa0.95□□□□□ -2.26
CMS1YLR003C CAF4P36130 643 aa0.95□□□□□ -2.26
CMS1YLR003C CUP9P41817 306 aa0.95□□□□□ -2.26
CMS1YLR003C PRP11Q07350 266 aaPredicted RBP0.95□□□□□ -2.26
CMS1YLR003C YOL024WQ08172 172 aa0.95□□□□□ -2.26
CMS1YLR003C TAH1P25638 111 aaPredicted RBP0.94□□□□□ -2.26
CMS1YLR003C YHL018WP38744 120 aaPredicted RBP0.94□□□□□ -2.26
CMS1YLR003C SOK1P40317 901 aa0.94□□□□□ -2.26
CMS1YLR003C HYR1P40581 163 aaKnown RBP0.94□□□□□ -2.26
CMS1YLR003C TMA22P47089 198 aaPredicted RBP0.94□□□□□ -2.26
CMS1YLR003C DIG2Q03373 323 aaKnown RBP0.94□□□□□ -2.26
CMS1YLR003C SHH3Q04487 196 aa0.94□□□□□ -2.26
CMS1YLR003C YMR253CQ04835 414 aa0.94□□□□□ -2.26
CMS1YLR003C NOC4Q06512 552 aaPredicted RBP0.94□□□□□ -2.26
CMS1YLR003C YLR422WQ06409 1932 aa0.93□□□□□ -2.26
CMS1YLR003C COX8P04039 78 aa0.93□□□□□ -2.26
CMS1YLR003C YHR212W-AP0CX91 67 aa0.93□□□□□ -2.26
CMS1YLR003C APA2P22108 325 aa0.93□□□□□ -2.26
CMS1YLR003C YCL042WP25572 119 aa0.93□□□□□ -2.26
CMS1YLR003C MGT1P26188 188 aa0.93□□□□□ -2.26
CMS1YLR003C EDC3P39998 551 aaKnown RBP0.93□□□□□ -2.26
CMS1YLR003C SBH1P52870 82 aa0.93□□□□□ -2.26
CMS1YLR003C HOP2P53187 214 aa0.93□□□□□ -2.26
CMS1YLR003C YNL247WP53852 767 aaKnown RBP0.93□□□□□ -2.26
CMS1YLR003C BRX1Q08235 291 aaKnown RBP0.93□□□□□ -2.26
CMS1YLR003C FIT2Q08906 153 aa0.93□□□□□ -2.26
CMS1YLR003C YPR013CQ12145 317 aa0.93□□□□□ -2.26
CMS1YLR003C YPR014CQ6B0W2 109 aa0.93□□□□□ -2.26
CMS1YLR003C GSP2P32836 220 aaKnown RBP0.92□□□□□ -2.26
CMS1YLR003C FLX1P40464 311 aa0.92□□□□□ -2.26
CMS1YLR003C YAE1P47118 141 aaPredicted RBP0.92□□□□□ -2.26
CMS1YLR003C UBC12P52491 188 aa0.92□□□□□ -2.26
CMS1YLR003C YNL033WP53964 284 aa0.92□□□□□ -2.26
CMS1YLR003C CWC27Q02770 301 aa0.92□□□□□ -2.26
CMS1YLR003C VPS71Q03433 280 aa0.92□□□□□ -2.26
CMS1YLR003C AIM34Q03673 198 aa0.92□□□□□ -2.26
CMS1YLR003C UPS3Q04006 179 aa0.92□□□□□ -2.26
CMS1YLR003C GRX8Q05926 109 aa0.92□□□□□ -2.26
CMS1YLR003C YOR342CQ12182 319 aa0.92□□□□□ -2.26
CMS1YLR003C RPS24AP0CX31 135 aaKnown RBP0.91□□□□□ -2.26
CMS1YLR003C RPS24BP0CX32 135 aaKnown RBP0.91□□□□□ -2.26
CMS1YLR003C ARO7P32178 256 aa0.91□□□□□ -2.26
CMS1YLR003C YEL067CP39978 195 aa0.91□□□□□ -2.26
CMS1YLR003C HUA1P40325 198 aa0.91□□□□□ -2.26
CMS1YLR003C YFL019CP43576 117 aa0.91□□□□□ -2.26
CMS1YLR003C YFH7P43591 353 aa0.91□□□□□ -2.26
CMS1YLR003C RPL37AP49166 88 aaKnown RBP0.91□□□□□ -2.26
CMS1YLR003C ARO80Q04052 950 aa0.91□□□□□ -2.26
CMS1YLR003C AQY2P0CD90 149 aa0.9□□□□□ -2.27
CMS1YLR003C TIR1P10863 254 aa0.9□□□□□ -2.27
CMS1YLR003C SFK1P35735 353 aa0.9□□□□□ -2.27
CMS1YLR003C SPC25P40014 221 aa0.9□□□□□ -2.27
CMS1YLR003C PIR1Q03178 341 aa0.9□□□□□ -2.27
CMS1YLR003C RNH202Q05635 350 aa0.9□□□□□ -2.27
CMS1YLR003C NAT3Q06504 195 aa0.9□□□□□ -2.27
CMS1YLR003C DUR1,2P32528 1835 aaKnown RBP0.89□□□□□ -2.27
CMS1YLR003C STP22P25604 385 aa0.89□□□□□ -2.27
CMS1YLR003C ADE1P27616 306 aa0.89□□□□□ -2.27
CMS1YLR003C NSG1P38837 291 aa0.89□□□□□ -2.27
CMS1YLR003C GPI14P47088 403 aaKnown RBP0.89□□□□□ -2.27
CMS1YLR003C TDA4P47153 279 aa0.89□□□□□ -2.27
CMS1YLR003C GIM3P53900 129 aa0.89□□□□□ -2.27
CMS1YLR003C DAD4P69851 72 aa0.89□□□□□ -2.27
CMS1YLR003C YMR007WQ03675 126 aa0.89□□□□□ -2.27
CMS1YLR003C FYV12Q08559 129 aa0.89□□□□□ -2.27
CMS1YLR003C YDL085C-AQ3E7B7 68 aaKnown RBP0.89□□□□□ -2.27
CMS1YLR003C IDP1P21954 428 aaKnown RBP0.88□□□□□ -2.27
CMS1YLR003C RPB7P34087 171 aa0.88□□□□□ -2.27
CMS1YLR003C YHL042WP38729 150 aa0.88□□□□□ -2.27
CMS1YLR003C YEL008WP40001 126 aa0.88□□□□□ -2.27
CMS1YLR003C THG1P53215 237 aaKnown RBP0.88□□□□□ -2.27
CMS1YLR003C NRK1P53915 240 aa0.88□□□□□ -2.27
CMS1YLR003C SNO1Q03144 224 aa0.88□□□□□ -2.27
CMS1YLR003C YMR252CQ04814 134 aa0.88□□□□□ -2.27
CMS1YLR003C GCY1P14065 312 aaKnown RBP RIP-Chip data0.87□□□□□ -2.27not detected
CMS1YLR003C STF2P16965 84 aa0.87□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms