RNA–Protein interactions for RNA: YKL057C

NUP120, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeast

Gene NUP120, Length 3,114 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP120	YKL057C	FES1	P38260	290 aa		0.96	□□□□□ -2.26
NUP120	YKL057C	SOK1	P40317	901 aa		0.96	□□□□□ -2.26
NUP120	YKL057C	RSM10	Q03201	203 aa		0.96	□□□□□ -2.26
NUP120	YKL057C	IRC23	Q08416	157 aa		0.96	□□□□□ -2.26
NUP120	YKL057C	PDR18	P53756	1333 aa		0.96	□□□□□ -2.26
NUP120	YKL057C	YGL041W-A	P0C5N3	154 aa		0.95	□□□□□ -2.26
NUP120	YKL057C	AHT1	P29589	182 aa		0.95	□□□□□ -2.26
NUP120	YKL057C	EDC3	P39998	551 aa	Known RBP	0.95	□□□□□ -2.26
NUP120	YKL057C	YNL247W	P53852	767 aa	Known RBP	0.95	□□□□□ -2.26
NUP120	YKL057C	PRP11	Q07350	266 aa	Predicted RBP	0.95	□□□□□ -2.26
NUP120	YKL057C	RAD6	P06104	172 aa		0.95	□□□□□ -2.26
NUP120	YKL057C	CMD1	P06787	147 aa	Known RBP	0.95	□□□□□ -2.26
NUP120	YKL057C	CLG1	P35190	452 aa		0.95	□□□□□ -2.26
NUP120	YKL057C	VPS71	Q03433	280 aa		0.95	□□□□□ -2.26
NUP120	YKL057C	LOA1	Q06508	300 aa		0.95	□□□□□ -2.26
NUP120	YKL057C	PSF1	Q12488	208 aa		0.95	□□□□□ -2.26
NUP120	YKL057C	POR1	P04840	283 aa	Known RBP	0.95	□□□□□ -2.26
NUP120	YKL057C	RTC3	P38804	111 aa	Predicted RBP	0.95	□□□□□ -2.26
NUP120	YKL057C	TIM11	P81449	96 aa	Predicted RBP	0.95	□□□□□ -2.26
NUP120	YKL057C	SHH4	Q06236	168 aa		0.95	□□□□□ -2.26
NUP120	YKL057C	ABP140	Q08641	628 aa	Known RBP	0.95	□□□□□ -2.26
NUP120	YKL057C	YLR046C	Q12253	270 aa		0.95	□□□□□ -2.26
NUP120	YKL057C	YNL146C-A	Q3E7Z1	64 aa		0.95	□□□□□ -2.26
NUP120	YKL057C	RPB3	P16370	318 aa	Known RBP	0.94	□□□□□ -2.26
NUP120	YKL057C	ARO7	P32178	256 aa		0.94	□□□□□ -2.26
NUP120	YKL057C	TMA19	P35691	167 aa	Known RBP	0.94	□□□□□ -2.26
NUP120	YKL057C	YJR111C	P47148	283 aa	Known RBP	0.94	□□□□□ -2.26
NUP120	YKL057C	KNH1	P50112	268 aa		0.94	□□□□□ -2.26
NUP120	YKL057C	SHH3	Q04487	196 aa		0.94	□□□□□ -2.26
NUP120	YKL057C	YOR1	P53049	1477 aa		0.94	□□□□□ -2.26
NUP120	YKL057C	BUB2	P26448	306 aa	Predicted RBP	0.94	□□□□□ -2.26
NUP120	YKL057C	YKL075C	P36083	450 aa		0.94	□□□□□ -2.26
NUP120	YKL057C	UTP30	P36144	274 aa	Known RBP	0.94	□□□□□ -2.26
NUP120	YKL057C	YMR007W	Q03675	126 aa		0.94	□□□□□ -2.26
NUP120	YKL057C	YLR422W	Q06409	1932 aa		0.94	□□□□□ -2.26
NUP120	YKL057C	YAP3	P38749	330 aa		0.93	□□□□□ -2.26
NUP120	YKL057C	GAA1	P39012	614 aa		0.93	□□□□□ -2.26
NUP120	YKL057C	SER2	P42941	309 aa		0.93	□□□□□ -2.26
NUP120	YKL057C	COG5	P53951	403 aa		0.93	□□□□□ -2.26
NUP120	YKL057C	DYN3	Q04949	312 aa		0.93	□□□□□ -2.26
NUP120	YKL057C	YDL157C	Q12082	118 aa		0.93	□□□□□ -2.26
NUP120	YKL057C	YPR013C	Q12145	317 aa		0.93	□□□□□ -2.26
NUP120	YKL057C	CSI2	Q08054	341 aa		0.93	□□□□□ -2.26
NUP120	YKL057C	VAM10	Q08474	114 aa		0.93	□□□□□ -2.26
NUP120	YKL057C	GEP7	P53171	287 aa		0.93	□□□□□ -2.26
NUP120	YKL057C	MCP1	Q12106	302 aa		0.93	□□□□□ -2.26
NUP120	YKL057C	CMC2	Q3E7A4	109 aa		0.93	□□□□□ -2.26
NUP120	YKL057C	QCR2	P07257	368 aa		0.92	□□□□□ -2.26
NUP120	YKL057C	SEN2	P16658	377 aa		0.92	□□□□□ -2.26
NUP120	YKL057C	GRX2	P17695	143 aa	Known RBP	0.92	□□□□□ -2.26
NUP120	YKL057C	YFH7	P43591	353 aa		0.92	□□□□□ -2.26
NUP120	YKL057C	YGR050C	P53231	118 aa		0.92	□□□□□ -2.26
NUP120	YKL057C	ARR2	Q06597	130 aa		0.92	□□□□□ -2.26
NUP120	YKL057C	MRS1	P07266	363 aa		0.91	□□□□□ -2.26
NUP120	YKL057C	PEX34	P25584	144 aa		0.91	□□□□□ -2.26
NUP120	YKL057C	STF2	P16965	84 aa		0.91	□□□□□ -2.26
NUP120	YKL057C	PRE1	P22141	198 aa	Known RBP	0.91	□□□□□ -2.26
NUP120	YKL057C	TRR1	P29509	319 aa	Known RBP	0.91	□□□□□ -2.26
NUP120	YKL057C	SRY1	P36007	326 aa		0.91	□□□□□ -2.26
NUP120	YKL057C	SVP26	P38869	228 aa		0.91	□□□□□ -2.26
NUP120	YKL057C	FAB1	P34756	2278 aa		0.91	□□□□□ -2.26
NUP120	YKL057C	NSG1	P38837	291 aa		0.91	□□□□□ -2.26
NUP120	YKL057C	JAC1	P53193	184 aa		0.91	□□□□□ -2.26
NUP120	YKL057C	IGO1	P53897	168 aa		0.91	□□□□□ -2.26
NUP120	YKL057C	HYR1	P40581	163 aa	Known RBP	0.9	□□□□□ -2.27
NUP120	YKL057C	RIO1	Q12196	484 aa	Known RBP	0.9	□□□□□ -2.27
NUP120	YKL057C	HUA1	P40325	198 aa		0.9	□□□□□ -2.27
NUP120	YKL057C	SNO1	Q03144	224 aa		0.9	□□□□□ -2.27
NUP120	YKL057C	HSL1	P34244	1518 aa		0.89	□□□□□ -2.27
NUP120	YKL057C	RPO26	P20435	155 aa		0.89	□□□□□ -2.27
NUP120	YKL057C	YGL010W	P25338	174 aa		0.89	□□□□□ -2.27
NUP120	YKL057C	YCL042W	P25572	119 aa		0.89	□□□□□ -2.27
NUP120	YKL057C	ATP7	P30902	174 aa		0.89	□□□□□ -2.27
NUP120	YKL057C	ADE6	P38972	1358 aa	Known RBP	0.89	□□□□□ -2.27
NUP120	YKL057C	QCR7	P00128	127 aa		0.89	□□□□□ -2.27
NUP120	YKL057C	MAK5	P38112	773 aa	Predicted RBP	0.89	□□□□□ -2.27
NUP120	YKL057C	GLR1	P41921	483 aa	Known RBP	0.89	□□□□□ -2.27
NUP120	YKL057C	IRC22	P40006	225 aa		0.89	□□□□□ -2.27
NUP120	YKL057C	RPA43	P46669	326 aa		0.89	□□□□□ -2.27
NUP120	YKL057C	YJR149W	P47177	404 aa		0.89	□□□□□ -2.27
NUP120	YKL057C	YGL235W	P53071	178 aa		0.89	□□□□□ -2.27
NUP120	YKL057C	YNL184C	P53876	108 aa		0.89	□□□□□ -2.27
NUP120	YKL057C	FYV12	Q08559	129 aa		0.89	□□□□□ -2.27
NUP120	YKL057C	DDI2	P0CH63	225 aa		0.88	□□□□□ -2.27
NUP120	YKL057C	DDI3	P0CH64	225 aa		0.88	□□□□□ -2.27
NUP120	YKL057C	BOL2	P53082	120 aa		0.88	□□□□□ -2.27
NUP120	YKL057C	MPA43	P53583	542 aa	Predicted RBP	0.88	□□□□□ -2.27
NUP120	YKL057C	SPO13	P23624	291 aa		0.87	□□□□□ -2.27
NUP120	YKL057C	TAF14	P35189	244 aa		0.87	□□□□□ -2.27
NUP120	YKL057C	SPC25	P40014	221 aa		0.87	□□□□□ -2.27
NUP120	YKL057C	NSA2	P40078	261 aa	Known RBP	0.87	□□□□□ -2.27
NUP120	YKL057C	TAF2	P23255	1407 aa		0.87	□□□□□ -2.27
NUP120	YKL057C	COX8	P04039	78 aa		0.87	□□□□□ -2.27
NUP120	YKL057C	SEC11	P15367	167 aa		0.87	□□□□□ -2.27
NUP120	YKL057C	YER076C	P40049	302 aa		0.87	□□□□□ -2.27
NUP120	YKL057C	POP3	P53833	195 aa	Predicted RBP	0.87	□□□□□ -2.27
NUP120	YKL057C	GRE1	Q08969	168 aa		0.87	□□□□□ -2.27
NUP120	YKL057C	MON2	P48563	1636 aa	Predicted RBP	0.87	□□□□□ -2.27
NUP120	YKL057C	MDM35	O60200	86 aa		0.86	□□□□□ -2.27
NUP120	YKL057C	PBI2	P0CT04	75 aa	Known RBP	0.86	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 83.6 ms