RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP7YIL156W YOL029CQ08187 201 aa3.95□□□□□ -1.78
UBP7YIL156W NIP7Q08962 181 aaKnown RBP3.95□□□□□ -1.78
UBP7YIL156W YBL112CQ3E7Y4 105 aa3.95□□□□□ -1.78
UBP7YIL156W AUS1Q08409 1394 aa3.95□□□□□ -1.78
UBP7YIL156W MSA2P36157 363 aa3.95□□□□□ -1.78
UBP7YIL156W YGP1P38616 354 aaKnown RBP3.95□□□□□ -1.78
UBP7YIL156W AST2P39945 430 aaKnown RBP3.95□□□□□ -1.78
UBP7YIL156W SYS1P41544 203 aa3.95□□□□□ -1.78
UBP7YIL156W YDR249CQ03787 373 aa3.95□□□□□ -1.78
UBP7YIL156W TRM12Q04235 462 aa3.95□□□□□ -1.78
UBP7YIL156W IES4Q08561 116 aa3.95□□□□□ -1.78
UBP7YIL156W CDC8P00572 216 aa3.94□□□□□ -1.78
UBP7YIL156W PBI2P0CT04 75 aaKnown RBP3.94□□□□□ -1.78
UBP7YIL156W RPL2AP0CX45 254 aaKnown RBP3.94□□□□□ -1.78
UBP7YIL156W RPL2BP0CX46 254 aaKnown RBP3.94□□□□□ -1.78
UBP7YIL156W PRS3P38689 320 aaKnown RBP3.94□□□□□ -1.78
UBP7YIL156W YJR015WP47090 510 aa3.94□□□□□ -1.78
UBP7YIL156W PRR2Q12310 699 aa3.94□□□□□ -1.78
UBP7YIL156W RPO41P13433 1351 aaKnown RBP3.94□□□□□ -1.78
UBP7YIL156W FMP23P38231 175 aa3.94□□□□□ -1.78
UBP7YIL156W RFS1P38234 210 aaKnown RBP3.94□□□□□ -1.78
UBP7YIL156W RPA43P46669 326 aa3.94□□□□□ -1.78
UBP7YIL156W PGA1P53896 198 aa3.94□□□□□ -1.78
UBP7YIL156W YPD1Q07688 167 aa3.94□□□□□ -1.78
UBP7YIL156W YPL162CQ12042 273 aa3.94□□□□□ -1.78
UBP7YIL156W DFM1Q12743 341 aaKnown RBP3.94□□□□□ -1.78
UBP7YIL156W YFR032C-BQ8TGU2 87 aa3.94□□□□□ -1.78
UBP7YIL156W YLR462WO13556 202 aa3.93□□□□□ -1.78
UBP7YIL156W YEL075CP39972 122 aa3.93□□□□□ -1.78
UBP7YIL156W SLD7Q08457 257 aa3.93□□□□□ -1.78
UBP7YIL156W PDR18P53756 1333 aa3.93□□□□□ -1.78
UBP7YIL156W MIC19P43594 170 aa3.93□□□□□ -1.78
UBP7YIL156W ECM19Q06011 112 aa3.93□□□□□ -1.78
UBP7YIL156W PST2Q12335 198 aaKnown RBP3.93□□□□□ -1.78
UBP7YIL156W DDP1Q99321 188 aaKnown RBP3.93□□□□□ -1.78
UBP7YIL156W RPS19AP07280 144 aaKnown RBP3.93□□□□□ -1.78
UBP7YIL156W RPS19BP07281 144 aaPredicted RBP3.93□□□□□ -1.78
UBP7YIL156W PET9P18239 318 aaKnown RBP3.93□□□□□ -1.78
UBP7YIL156W SUA7P29055 345 aaPredicted RBP3.93□□□□□ -1.78
UBP7YIL156W RPF1P38805 295 aaKnown RBP3.93□□□□□ -1.78
UBP7YIL156W SOL1P50278 321 aa3.93□□□□□ -1.78
UBP7YIL156W YPL264CQ08980 353 aa3.93□□□□□ -1.78
UBP7YIL156W SPT15P13393 240 aaKnown RBP3.92□□□□□ -1.78
UBP7YIL156W YBR285WP38354 144 aa3.92□□□□□ -1.78
UBP7YIL156W ASP1P38986 381 aaPredicted RBP3.92□□□□□ -1.78
UBP7YIL156W TEM1P38987 245 aa3.92□□□□□ -1.78
UBP7YIL156W PHB1P40961 287 aa3.92□□□□□ -1.78
UBP7YIL156W BOR1P53838 576 aa3.92□□□□□ -1.78
UBP7YIL156W UBC7Q02159 165 aa3.92□□□□□ -1.78
UBP7YIL156W YMR320WQ04897 101 aa3.92□□□□□ -1.78
UBP7YIL156W PPT2Q12036 173 aa3.92□□□□□ -1.78
UBP7YIL156W WIP1Q2V2P8 89 aa3.92□□□□□ -1.78
UBP7YIL156W YOR020W-AQ3E824 90 aa3.92□□□□□ -1.78
UBP7YIL156W ARO2P28777 376 aaKnown RBP3.92□□□□□ -1.78
UBP7YIL156W UTP30P36144 274 aaKnown RBP3.92□□□□□ -1.78
UBP7YIL156W YEA4P40004 342 aa3.92□□□□□ -1.78
UBP7YIL156W MNN5P46982 586 aa3.92□□□□□ -1.78
UBP7YIL156W SDT1P53078 280 aa3.92□□□□□ -1.78
UBP7YIL156W YPR014CQ6B0W2 109 aa3.92□□□□□ -1.78
UBP7YIL156W YPR170W-BP0C5R9 85 aa3.91□□□□□ -1.78
UBP7YIL156W CKS1P20486 150 aaKnown RBP3.91□□□□□ -1.78
UBP7YIL156W SPO13P23624 291 aa3.91□□□□□ -1.78
UBP7YIL156W LDB16P25587 256 aa3.91□□□□□ -1.78
UBP7YIL156W APQ12P40532 138 aa3.91□□□□□ -1.78
UBP7YIL156W MRX8Q05473 314 aa3.91□□□□□ -1.78
UBP7YIL156W SNM1P40993 198 aa3.91□□□□□ -1.78
UBP7YIL156W LSM3P57743 89 aaKnown RBP3.91□□□□□ -1.78
UBP7YIL156W SMT3Q12306 101 aaKnown RBP3.91□□□□□ -1.78
UBP7YIL156W TSC3Q3E790 80 aa3.91□□□□□ -1.78
UBP7YIL156W YBR063CP38083 404 aa3.91□□□□□ -1.78
UBP7YIL156W YIL054WP40524 105 aa3.91□□□□□ -1.78
UBP7YIL156W PST1Q12355 444 aa3.91□□□□□ -1.78
UBP7YIL156W RPB9P27999 122 aa3.9□□□□□ -1.78
UBP7YIL156W SNX4P47057 423 aa3.9□□□□□ -1.78
UBP7YIL156W UFD1P53044 361 aa3.9□□□□□ -1.78
UBP7YIL156W YPL247CQ12523 523 aa3.9□□□□□ -1.78
UBP7YIL156W Q0144Q9ZZW2 109 aa3.9□□□□□ -1.78
UBP7YIL156W CSH1P38287 376 aa3.9□□□□□ -1.79
UBP7YIL156W MED6P38782 295 aa3.9□□□□□ -1.79
UBP7YIL156W OSH6Q02201 448 aa3.9□□□□□ -1.79
UBP7YIL156W OCH1P31755 480 aa3.89□□□□□ -1.79
UBP7YIL156W SEC17P32602 292 aa3.89□□□□□ -1.79
UBP7YIL156W RRT13P40042 185 aa3.89□□□□□ -1.79
UBP7YIL156W PGU1P47180 361 aa3.89□□□□□ -1.79
UBP7YIL156W ORM1P53224 222 aa3.89□□□□□ -1.79
UBP7YIL156W HHT1P61830 136 aa3.89□□□□□ -1.79
UBP7YIL156W TVP15Q03860 143 aa3.89□□□□□ -1.79
UBP7YIL156W YAL067W-AQ8TGK6 75 aa3.89□□□□□ -1.79
UBP7YIL156W TIM8P57744 87 aa3.89□□□□□ -1.79
UBP7YIL156W HRD1Q08109 551 aa3.89□□□□□ -1.79
UBP7YIL156W SFC1P33303 322 aa3.89□□□□□ -1.79
UBP7YIL156W RFC2P40348 353 aa3.89□□□□□ -1.79
UBP7YIL156W THI74Q04083 370 aa3.89□□□□□ -1.79
UBP7YIL156W TSA2Q04120 196 aa3.89□□□□□ -1.79
UBP7YIL156W YDL211CQ12121 372 aa3.89□□□□□ -1.79
UBP7YIL156W YOR342CQ12182 319 aa3.89□□□□□ -1.79
UBP7YIL156W YER137CP40083 148 aaKnown RBP3.88□□□□□ -1.79
UBP7YIL156W YDL180WQ12301 547 aa3.88□□□□□ -1.79
UBP7YIL156W YBR298C-AQ8TGK4 73 aa3.88□□□□□ -1.79
UBP7YIL156W RPS1AP33442 255 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms