RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W ADE1P27616 306 aa1.25□□□□□ -2.21
RPL40AYIL148W TVP38P36164 337 aa1.25□□□□□ -2.21
RPL40AYIL148W FMP32P43557 207 aa1.25□□□□□ -2.21
RPL40AYIL148W SKI6P46948 246 aaPredicted RBP1.25□□□□□ -2.21
RPL40AYIL148W NRK1P53915 240 aa1.25□□□□□ -2.21
RPL40AYIL148W GRX5Q02784 150 aa1.25□□□□□ -2.21
RPL40AYIL148W YMR099CQ03161 297 aaKnown RBP1.25□□□□□ -2.21
RPL40AYIL148W GRX8Q05926 109 aa1.25□□□□□ -2.21
RPL40AYIL148W YPR174CQ06616 221 aaPredicted RBP1.25□□□□□ -2.21
RPL40AYIL148W YHR007C-AQ07074 71 aa1.25□□□□□ -2.21
RPL40AYIL148W YOL014WQ08110 124 aa1.25□□□□□ -2.21
RPL40AYIL148W BEM2P39960 2167 aaKnown RBP1.25□□□□□ -2.21
RPL40AYIL148W YAR023CD6VPM8 179 aa1.24□□□□□ -2.21
RPL40AYIL148W POR1P04840 283 aaKnown RBP1.24□□□□□ -2.21
RPL40AYIL148W GPA2P10823 449 aa1.24□□□□□ -2.21
RPL40AYIL148W NSP1P14907 823 aaKnown RBP1.24□□□□□ -2.21
RPL40AYIL148W TRR1P29509 319 aaKnown RBP1.24□□□□□ -2.21
RPL40AYIL148W CUP9P41817 306 aa1.24□□□□□ -2.21
RPL40AYIL148W KNH1P50112 268 aa1.24□□□□□ -2.21
RPL40AYIL148W SNO1Q03144 224 aa1.24□□□□□ -2.21
RPL40AYIL148W PLP1Q04004 230 aa1.24□□□□□ -2.21
RPL40AYIL148W ARO80Q04052 950 aa1.24□□□□□ -2.21
RPL40AYIL148W SHH3Q04487 196 aa1.24□□□□□ -2.21
RPL40AYIL148W SHH4Q06236 168 aa1.24□□□□□ -2.21
RPL40AYIL148W CSI2Q08054 341 aa1.24□□□□□ -2.21
RPL40AYIL148W YOR342CQ12182 319 aa1.24□□□□□ -2.21
RPL40AYIL148W CHD1P32657 1468 aa1.24□□□□□ -2.21
RPL40AYIL148W GCY1P14065 312 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
RPL40AYIL148W YGL010WP25338 174 aa1.23□□□□□ -2.21
RPL40AYIL148W MGT1P26188 188 aa1.23□□□□□ -2.21
RPL40AYIL148W VPS51P36116 164 aa1.23□□□□□ -2.21
RPL40AYIL148W EGD2P38879 174 aaKnown RBP1.23□□□□□ -2.21
RPL40AYIL148W SRP14P38985 146 aa1.23□□□□□ -2.21
RPL40AYIL148W RPL13BP40212 199 aaKnown RBP1.23□□□□□ -2.21
RPL40AYIL148W YJR111CP47148 283 aaKnown RBP1.23□□□□□ -2.21
RPL40AYIL148W TDA4P47153 279 aa1.23□□□□□ -2.21
RPL40AYIL148W UBC12P52491 188 aa1.23□□□□□ -2.21
RPL40AYIL148W JAC1P53193 184 aa1.23□□□□□ -2.21
RPL40AYIL148W PEX11Q12462 236 aa1.23□□□□□ -2.21
RPL40AYIL148W RPL13AQ12690 199 aaPredicted RBP1.23□□□□□ -2.21
RPL40AYIL148W SEC11P15367 167 aa1.22□□□□□ -2.21
RPL40AYIL148W FPR1P20081 114 aaKnown RBP1.22□□□□□ -2.21
RPL40AYIL148W SPO13P23624 291 aa1.22□□□□□ -2.21
RPL40AYIL148W NSG1P38837 291 aa1.22□□□□□ -2.21
RPL40AYIL148W YER135CP40082 130 aa1.22□□□□□ -2.21
RPL40AYIL148W YPL073CP40323 161 aa1.22□□□□□ -2.21
RPL40AYIL148W POG1P40473 351 aa1.22□□□□□ -2.21
RPL40AYIL148W POP3P53833 195 aaPredicted RBP1.22□□□□□ -2.21
RPL40AYIL148W VPS71Q03433 280 aa1.22□□□□□ -2.21
RPL40AYIL148W YMR315WQ04869 349 aaKnown RBP1.22□□□□□ -2.21
RPL40AYIL148W YLR162WQ06235 118 aa1.22□□□□□ -2.21
RPL40AYIL148W BRX1Q08235 291 aaKnown RBP1.22□□□□□ -2.21
RPL40AYIL148W MPD1Q12404 318 aaKnown RBP1.22□□□□□ -2.21
RPL40AYIL148W UBR2Q07963 1872 aa1.22□□□□□ -2.21
RPL40AYIL148W AHC2P25649 128 aa1.21□□□□□ -2.22
RPL40AYIL148W TIM13P53299 105 aa1.21□□□□□ -2.22
RPL40AYIL148W PGA1P53896 198 aa1.21□□□□□ -2.22
RPL40AYIL148W RCE1Q03530 315 aa1.21□□□□□ -2.22
RPL40AYIL148W IRC23Q08416 157 aa1.21□□□□□ -2.22
RPL40AYIL148W CYR1P08678 2026 aaKnown RBP1.2□□□□□ -2.22
RPL40AYIL148W YBR220CP38318 560 aa1.2□□□□□ -2.22
RPL40AYIL148W YER034WP40022 185 aaKnown RBP1.2□□□□□ -2.22
RPL40AYIL148W GPI14P47088 403 aaKnown RBP1.2□□□□□ -2.22
RPL40AYIL148W SBH1P52870 82 aa1.2□□□□□ -2.22
RPL40AYIL148W MPC3P53311 146 aa1.2□□□□□ -2.22
RPL40AYIL148W MZM1Q03429 123 aaPredicted RBP1.2□□□□□ -2.22
RPL40AYIL148W HPT1Q04178 221 aaKnown RBP1.2□□□□□ -2.22
RPL40AYIL148W YMR253CQ04835 414 aa1.2□□□□□ -2.22
RPL40AYIL148W YLR412C-AQ3E742 68 aa1.2□□□□□ -2.22
RPL40AYIL148W CMC2Q3E7A4 109 aa1.2□□□□□ -2.22
RPL40AYIL148W YKL102CP34249 101 aa1.19□□□□□ -2.22
RPL40AYIL148W SFK1P35735 353 aa1.19□□□□□ -2.22
RPL40AYIL148W PAM17P36147 197 aa1.19□□□□□ -2.22
RPL40AYIL148W NVJ1P38881 321 aa1.19□□□□□ -2.22
RPL40AYIL148W YNL247WP53852 767 aaKnown RBP1.19□□□□□ -2.22
RPL40AYIL148W VPS28Q02767 242 aa1.19□□□□□ -2.22
RPL40AYIL148W TLG1Q03322 224 aa1.19□□□□□ -2.22
RPL40AYIL148W GIM5Q04493 163 aa1.19□□□□□ -2.22
RPL40AYIL148W PRP11Q07350 266 aaPredicted RBP1.19□□□□□ -2.22
RPL40AYIL148W YPR013CQ12145 317 aa1.19□□□□□ -2.22
RPL40AYIL148W TIR1P10863 254 aa1.18□□□□□ -2.22
RPL40AYIL148W STP22P25604 385 aa1.18□□□□□ -2.22
RPL40AYIL148W GSP2P32836 220 aaKnown RBP1.18□□□□□ -2.22
RPL40AYIL148W SPC25P40014 221 aa1.18□□□□□ -2.22
RPL40AYIL148W YER076CP40049 302 aa1.18□□□□□ -2.22
RPL40AYIL148W NSA2P40078 261 aaKnown RBP1.18□□□□□ -2.22
RPL40AYIL148W RFC2P40348 353 aa1.18□□□□□ -2.22
RPL40AYIL148W YFL019CP43576 117 aa1.18□□□□□ -2.22
RPL40AYIL148W YLR460CP54007 376 aa1.18□□□□□ -2.22
RPL40AYIL148W DIG2Q03373 323 aaKnown RBP1.18□□□□□ -2.22
RPL40AYIL148W GPI17Q04080 534 aa1.18□□□□□ -2.22
RPL40AYIL148W GRE1Q08969 168 aa1.18□□□□□ -2.22
RPL40AYIL148W MDM35O60200 86 aa1.17□□□□□ -2.22
RPL40AYIL148W QCR6P00127 147 aa1.17□□□□□ -2.22
RPL40AYIL148W CMD1P06787 147 aaKnown RBP1.17□□□□□ -2.22
RPL40AYIL148W RPL2AP0CX45 254 aaKnown RBP1.17□□□□□ -2.22
RPL40AYIL148W RPL2BP0CX46 254 aaKnown RBP1.17□□□□□ -2.22
RPL40AYIL148W IDP1P21954 428 aaKnown RBP1.17□□□□□ -2.22
RPL40AYIL148W ARO7P32178 256 aa1.17□□□□□ -2.22
RPL40AYIL148W UPS2P35200 230 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 99.2 ms