RNA–Protein interactions for RNA: YGR058W

PEF1, Transcript of Penta-EF-hand protein, yeastyeast

Gene PEF1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEF1YGR058W YGL159WP53110 370 aa2.46□□□□□ -2.02
PEF1YGR058W ORM1P53224 222 aa2.46□□□□□ -2.02
PEF1YGR058W YGR042WP53227 271 aa2.46□□□□□ -2.02
PEF1YGR058W NRK1P53915 240 aa2.46□□□□□ -2.02
PEF1YGR058W MRX11Q03079 207 aa2.46□□□□□ -2.02
PEF1YGR058W HNT1Q04344 158 aaKnown RBP2.46□□□□□ -2.02
PEF1YGR058W YLR283WQ05867 314 aa2.46□□□□□ -2.02
PEF1YGR058W YDL180WQ12301 547 aa2.46□□□□□ -2.02
PEF1YGR058W FSH3Q99369 266 aa2.46□□□□□ -2.02
PEF1YGR058W GCN1P33892 2672 aaKnown RBP2.46□□□□□ -2.02
PEF1YGR058W MEC1P38111 2368 aa2.45□□□□□ -2.02
PEF1YGR058W TDH2P00358 332 aaKnown RBP2.45□□□□□ -2.02
PEF1YGR058W TDH3P00359 332 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
PEF1YGR058W RPL6BP05739 176 aaKnown RBP2.45□□□□□ -2.02
PEF1YGR058W PUT1P09368 476 aa2.45□□□□□ -2.02
PEF1YGR058W RPL30P14120 105 aaKnown RBP2.45□□□□□ -2.02
PEF1YGR058W HXT2P23585 541 aa2.45□□□□□ -2.02
PEF1YGR058W YCR016WP25617 290 aaKnown RBP2.45□□□□□ -2.02
PEF1YGR058W ATG15P25641 520 aa2.45□□□□□ -2.02
PEF1YGR058W RRF1P38771 230 aa2.45□□□□□ -2.02
PEF1YGR058W VMA22P38784 181 aa2.45□□□□□ -2.02
PEF1YGR058W NSA1P53136 463 aaPredicted RBP2.45□□□□□ -2.02
PEF1YGR058W RPN14P53196 417 aa2.45□□□□□ -2.02
PEF1YGR058W DIG2Q03373 323 aaKnown RBP2.45□□□□□ -2.02
PEF1YGR058W YDR391CQ04170 232 aa2.45□□□□□ -2.02
PEF1YGR058W RAF1Q06891 181 aa2.45□□□□□ -2.02
PEF1YGR058W YLR031WQ07978 186 aa2.45□□□□□ -2.02
PEF1YGR058W RDI1Q12434 202 aa2.45□□□□□ -2.02
PEF1YGR058W CDC28P00546 298 aaKnown RBP2.44□□□□□ -2.02
PEF1YGR058W DSF1P0CX08 502 aa2.44□□□□□ -2.02
PEF1YGR058W YNR073CP0CX09 502 aa2.44□□□□□ -2.02
PEF1YGR058W CKS1P20486 150 aaKnown RBP2.44□□□□□ -2.02
PEF1YGR058W IFM1P25038 676 aa2.44□□□□□ -2.02
PEF1YGR058W RFA3P26755 122 aaKnown RBP2.44□□□□□ -2.02
PEF1YGR058W MRP17P28778 131 aa2.44□□□□□ -2.02
PEF1YGR058W PEX4P29340 183 aa2.44□□□□□ -2.02
PEF1YGR058W TRR1P29509 319 aaKnown RBP2.44□□□□□ -2.02
PEF1YGR058W VMA5P31412 392 aaKnown RBP2.44□□□□□ -2.02
PEF1YGR058W VAM7P32912 316 aa2.44□□□□□ -2.02
PEF1YGR058W MRPS5P33759 307 aa2.44□□□□□ -2.02
PEF1YGR058W YER084WP40057 128 aa2.44□□□□□ -2.02
PEF1YGR058W MOB2P43563 287 aa2.44□□□□□ -2.02
PEF1YGR058W LSM1P47017 172 aaKnown RBP2.44□□□□□ -2.02
PEF1YGR058W YJL016WP47072 561 aa2.44□□□□□ -2.02
PEF1YGR058W RSM27P53305 110 aa2.44□□□□□ -2.02
PEF1YGR058W MRPL50P53724 139 aa2.44□□□□□ -2.02
PEF1YGR058W SUR7P54003 302 aa2.44□□□□□ -2.02
PEF1YGR058W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
PEF1YGR058W RPL6AQ02326 176 aaKnown RBP2.44□□□□□ -2.02
PEF1YGR058W RCE1Q03530 315 aa2.44□□□□□ -2.02
PEF1YGR058W VBA1Q04301 562 aa2.44□□□□□ -2.02
PEF1YGR058W API2Q04413 109 aa2.44□□□□□ -2.02
PEF1YGR058W SYM1Q06563 197 aa2.44□□□□□ -2.02
PEF1YGR058W MRX9Q07349 420 aaKnown RBP2.44□□□□□ -2.02
PEF1YGR058W USB1Q12208 290 aaKnown RBP2.44□□□□□ -2.02
PEF1YGR058W YAL067W-AQ8TGK6 75 aa2.44□□□□□ -2.02
PEF1YGR058W RPL23AP0CX41 137 aaKnown RBP2.43□□□□□ -2.02
PEF1YGR058W RPL23BP0CX42 137 aaKnown RBP2.43□□□□□ -2.02
PEF1YGR058W SAG1P20840 650 aa2.43□□□□□ -2.02
PEF1YGR058W ACB1P31787 87 aa2.43□□□□□ -2.02
PEF1YGR058W YKL063CP35725 167 aa2.43□□□□□ -2.02
PEF1YGR058W PAN3P36102 679 aaPredicted RBP2.43□□□□□ -2.02
PEF1YGR058W YPC1P38298 316 aa2.43□□□□□ -2.02
PEF1YGR058W YER137CP40083 148 aaKnown RBP2.43□□□□□ -2.02
PEF1YGR058W YIR035CP40579 254 aa2.43□□□□□ -2.02
PEF1YGR058W UFD1P53044 361 aa2.43□□□□□ -2.02
PEF1YGR058W OKP1P53298 406 aa2.43□□□□□ -2.02
PEF1YGR058W GIM3P53900 129 aa2.43□□□□□ -2.02
PEF1YGR058W PLP1Q04004 230 aa2.43□□□□□ -2.02
PEF1YGR058W COA4Q05809 96 aa2.43□□□□□ -2.02
PEF1YGR058W RFU1Q08003 200 aa2.43□□□□□ -2.02
PEF1YGR058W YNG1Q08465 219 aa2.43□□□□□ -2.02
PEF1YGR058W FIT3Q08907 204 aa2.43□□□□□ -2.02
PEF1YGR058W ERP4Q12450 207 aa2.43□□□□□ -2.02
PEF1YGR058W HUT1Q12520 339 aa2.43□□□□□ -2.02
PEF1YGR058W PET20Q99373 253 aa2.43□□□□□ -2.02
PEF1YGR058W FUS3P16892 353 aaKnown RBP2.42□□□□□ -2.02
PEF1YGR058W MIR1P23641 311 aaKnown RBP2.42□□□□□ -2.02
PEF1YGR058W YCR101CP25607 182 aa2.42□□□□□ -2.02
PEF1YGR058W SUA5P32579 426 aa2.42□□□□□ -2.02
PEF1YGR058W YBL010CP32788 280 aa2.42□□□□□ -2.02
PEF1YGR058W MCH2P36032 473 aa2.42□□□□□ -2.02
PEF1YGR058W POP8P38208 133 aa2.42□□□□□ -2.02
PEF1YGR058W YHL037CP38733 133 aa2.42□□□□□ -2.02
PEF1YGR058W BFR1P38934 470 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
PEF1YGR058W SEN34P39707 275 aa2.42□□□□□ -2.02
PEF1YGR058W FLX1P40464 311 aa2.42□□□□□ -2.02
PEF1YGR058W GNA1P43577 159 aaPredicted RBP2.42□□□□□ -2.02
PEF1YGR058W SIP18P50263 79 aa2.42□□□□□ -2.02
PEF1YGR058W NIF3P53081 288 aa2.42□□□□□ -2.02
PEF1YGR058W ALG9P53868 555 aaKnown RBP2.42□□□□□ -2.02
PEF1YGR058W PRM15Q03262 622 aa2.42□□□□□ -2.02
PEF1YGR058W YML018CQ03730 393 aa2.42□□□□□ -2.02
PEF1YGR058W RRS1Q08746 203 aaKnown RBP2.42□□□□□ -2.02
PEF1YGR058W SCP1Q08873 200 aa2.42□□□□□ -2.02
PEF1YGR058W RTR2Q12378 196 aa2.42□□□□□ -2.02
PEF1YGR058W RPL25P04456 142 aaKnown RBP2.41□□□□□ -2.02
PEF1YGR058W YLL053CP0CD98 152 aa2.41□□□□□ -2.02
PEF1YGR058W SEN2P16658 377 aa2.41□□□□□ -2.02
PEF1YGR058W OCH1P31755 480 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms