RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BFR2	YDR299W	HYR1	P40581	163 aa	Known RBP	0.44	□□□□□ -2.34
BFR2	YDR299W	ERG10	P41338	398 aa	Known RBP	0.44	□□□□□ -2.34
BFR2	YDR299W	YFL065C	P43539	102 aa		0.44	□□□□□ -2.34
BFR2	YDR299W	ALB1	P47019	175 aa	Predicted RBP	0.44	□□□□□ -2.34
BFR2	YDR299W	TDA4	P47153	279 aa		0.44	□□□□□ -2.34
BFR2	YDR299W	PRP11	Q07350	266 aa	Predicted RBP	0.44	□□□□□ -2.34
BFR2	YDR299W	YRA1	Q12159	226 aa	Known RBP	0.44	□□□□□ -2.34
BFR2	YDR299W	YLR412C-A	Q3E742	68 aa		0.44	□□□□□ -2.34
BFR2	YDR299W	YPR014C	Q6B0W2	109 aa		0.44	□□□□□ -2.34
BFR2	YDR299W	JIP3	O13555	125 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	STP22	P25604	385 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	UBC8	P28263	218 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	ARO7	P32178	256 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	GSP2	P32836	220 aa	Known RBP	0.43	□□□□□ -2.34
BFR2	YDR299W	RPB7	P34087	171 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	CAF4	P36130	643 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	TVP23	P38962	199 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	YEA4	P40004	342 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	PDS1	P40316	373 aa	Predicted RBP	0.43	□□□□□ -2.34
BFR2	YDR299W	CUP9	P41817	306 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	SER2	P42941	309 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	FMP32	P43557	207 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	YFH7	P43591	353 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	MMS2	P53152	137 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	UPS3	Q04006	179 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	RNH1	Q04740	348 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	YET3	Q07451	203 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	YOR015W	Q12169	119 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	DGK1	Q12382	290 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	ADF1	Q2V2Q1	113 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	YFR032C-B	Q8TGU2	87 aa		0.43	□□□□□ -2.34
BFR2	YDR299W	YDR157W	A0A023PZE8	133 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	POR1	P04840	283 aa	Known RBP	0.42	□□□□□ -2.34
BFR2	YDR299W	MAK31	P23059	88 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	RFA3	P26755	122 aa	Known RBP	0.42	□□□□□ -2.34
BFR2	YDR299W	SPS18	P32572	300 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	TAF14	P35189	244 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.42	□□□□□ -2.34	not detected
BFR2	YDR299W	NSG1	P38837	291 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	YEL067C	P39978	195 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	YPL073C	P40323	161 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	NRK1	P53915	240 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	IRC23	Q08416	157 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	GET4	Q12125	312 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	YHR214C-E	Q8TGK0	99 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	ACC1	Q00955	2233 aa	Known RBP	0.42	□□□□□ -2.34
BFR2	YDR299W	MRS1	P07266	363 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.42	□□□□□ -2.34	not detected
BFR2	YDR299W	YCR023C	P25351	611 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	MGT1	P26188	188 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	YKT6	P36015	200 aa	Known RBP	0.42	□□□□□ -2.34
BFR2	YDR299W	MRPL15	P36523	253 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	SHG1	P38337	142 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	VMA22	P38784	181 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	NSA2	P40078	261 aa	Known RBP	0.42	□□□□□ -2.34
BFR2	YDR299W	YIL102C	P40488	101 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	XPT1	P47165	209 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	SBH2	P52871	88 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	JAC1	P53193	184 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	THG1	P53215	237 aa	Known RBP	0.42	□□□□□ -2.34
BFR2	YDR299W	MPC3	P53311	146 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	YNL184C	P53876	108 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	PET191	Q02772	108 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	VPS71	Q03433	280 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	AIM36	Q03798	255 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	HPT1	Q04178	221 aa	Known RBP	0.42	□□□□□ -2.34
BFR2	YDR299W	YMR252C	Q04814	134 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	YOL024W	Q08172	172 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	YPR013C	Q12145	317 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	YMR030W-A	Q3E760	96 aa		0.42	□□□□□ -2.34
BFR2	YDR299W	FAS1	P07149	2051 aa	Known RBP	0.41	□□□□□ -2.34
BFR2	YDR299W	COX8	P04039	78 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	YER188C-A	P0C0V2	99 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	IDP1	P21954	428 aa	Known RBP	0.41	□□□□□ -2.34
BFR2	YDR299W	SEC14	P24280	304 aa	Known RBP	0.41	□□□□□ -2.34
BFR2	YDR299W	YBL010C	P32788	280 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	NUF2	P33895	451 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	MAK5	P38112	773 aa	Predicted RBP	0.41	□□□□□ -2.34
BFR2	YDR299W	FMP23	P38231	175 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	YBR242W	P38331	238 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	YHL018W	P38744	120 aa	Predicted RBP	0.41	□□□□□ -2.34
BFR2	YDR299W	TIM13	P53299	105 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	PGA1	P53896	198 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	HHT1	P61830	136 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	TIM11	P81449	96 aa	Predicted RBP	0.41	□□□□□ -2.34
BFR2	YDR299W	PLP1	Q04004	230 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	RRP17	Q04031	235 aa	Predicted RBP	0.41	□□□□□ -2.34
BFR2	YDR299W	YDR391C	Q04170	232 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	LCL2	Q08045	131 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	YOL160W	Q08321	113 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	FYV12	Q08559	129 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	YOR342C	Q12182	319 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	MPD1	Q12404	318 aa	Known RBP	0.41	□□□□□ -2.34
BFR2	YDR299W	IGO2	Q9P305	131 aa		0.41	□□□□□ -2.34
BFR2	YDR299W	FMP49	A0A023PZB3	126 aa		0.4	□□□□□ -2.35
BFR2	YDR299W	QCR7	P00128	127 aa		0.4	□□□□□ -2.35
BFR2	YDR299W	MATALPHA2	P0CY08	210 aa		0.4	□□□□□ -2.35
BFR2	YDR299W	HMLALPHA2	P0CY09	210 aa		0.4	□□□□□ -2.35
BFR2	YDR299W	TIR1	P10863	254 aa		0.4	□□□□□ -2.35
BFR2	YDR299W	RAD9	P14737	1309 aa		0.4	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms