RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261C-DYDR261C-D MCA1Q08601 432 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D RHO1P06780 209 aaKnown RBP4.05□□□□□ -1.76
YDR261C-DYDR261C-D ASP3-2P0CX77 362 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D ASP3-3P0CX78 362 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D ASP3-4P0CX79 362 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D ASP3-1P0CZ17 362 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D STF2P16965 84 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D PHO80P20052 293 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D KTI12P34253 313 aaKnown RBP4.05□□□□□ -1.76
YDR261C-DYDR261C-D DCW1P36091 449 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D RPL32P38061 130 aaKnown RBP4.05□□□□□ -1.76
YDR261C-DYDR261C-D FAU1P40099 211 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D YIR016WP40572 265 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D NRG1Q03125 231 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D PBA1Q05778 276 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D SHH4Q06236 168 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D YCR075W-AQ3E830 75 aa4.05□□□□□ -1.76
YDR261C-DYDR261C-D KEG1P43614 200 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D YGR015CP53208 328 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D INN1P53901 409 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D ATG5Q12380 294 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D TEM1P38987 245 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D GGC1P38988 300 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D YEL073CP39974 107 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D MRPS16Q02608 121 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D YLL053CP0CD98 152 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D YGL149WP53116 101 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D COX1P00401 534 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D FUB1P25659 250 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D THI2P38141 450 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D YNL165WP53891 406 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D TPP1Q03796 238 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D RNH203Q12338 110 aa4.04□□□□□ -1.76
YDR261C-DYDR261C-D MRPL6P32904 214 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D PAU16P35994 123 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D CSH1P38287 376 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D VPS71Q03433 280 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D YDR461C-AQ2V2P7 80 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D YOR020W-AQ3E824 90 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D KTR3P38130 404 aaPredicted RBP4.03□□□□□ -1.76
YDR261C-DYDR261C-D YPT10P38146 199 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D SEN15Q04675 128 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D YOS1Q3E834 85 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D DDI2P0CH63 225 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D DDI3P0CH64 225 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D VMA11P32842 164 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D AUR1P36107 401 aaPredicted RBP4.03□□□□□ -1.76
YDR261C-DYDR261C-D YAR029WP39549 74 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D YIL024CP40543 189 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D PST1Q12355 444 aa4.03□□□□□ -1.76
YDR261C-DYDR261C-D WSC2P53832 503 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D YLR302CO13544 120 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D YOL163WP0CF20 169 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D KRE1P17260 313 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D TOM40P23644 387 aaKnown RBP4.02□□□□□ -1.77
YDR261C-DYDR261C-D TRX3P25372 127 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D SFK1P35735 353 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D AIM3P38266 947 aaKnown RBP4.02□□□□□ -1.77
YDR261C-DYDR261C-D HRB1P38922 454 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
YDR261C-DYDR261C-D PEX22P39718 180 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D URM1P40554 99 aaPredicted RBP4.02□□□□□ -1.77
YDR261C-DYDR261C-D PAU4P53427 120 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D PAL1Q05518 499 aaKnown RBP4.02□□□□□ -1.77
YDR261C-DYDR261C-D MIH1P23748 554 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D YBR090CP38253 122 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D YFL012WP43580 148 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D DGA1Q08650 418 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D PRS5Q12265 496 aaKnown RBP4.02□□□□□ -1.77
YDR261C-DYDR261C-D YNL277W-AQ3E7Z0 62 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D UTR2P32623 467 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D SWD2P36104 329 aaPredicted RBP4.02□□□□□ -1.77
YDR261C-DYDR261C-D SPO73P40031 143 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D YDR344CQ05510 147 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D YPR011CQ12251 326 aa4.02□□□□□ -1.77
YDR261C-DYDR261C-D RPS16AP0CX51 143 aaKnown RBP4.01□□□□□ -1.77
YDR261C-DYDR261C-D RPS16BP0CX52 143 aaKnown RBP4.01□□□□□ -1.77
YDR261C-DYDR261C-D MRPL7P36519 292 aa4.01□□□□□ -1.77
YDR261C-DYDR261C-D SPC1P46965 94 aa4.01□□□□□ -1.77
YDR261C-DYDR261C-D YPL080CQ02826 108 aa4.01□□□□□ -1.77
YDR261C-DYDR261C-D STP4Q07351 490 aa4.01□□□□□ -1.77
YDR261C-DYDR261C-D RXT3Q07458 294 aa4.01□□□□□ -1.77
YDR261C-DYDR261C-D RPS22AP0C0W1 130 aaKnown RBP4.01□□□□□ -1.77
YDR261C-DYDR261C-D YPS1P32329 569 aa4.01□□□□□ -1.77
YDR261C-DYDR261C-D DSS4P32601 143 aa4.01□□□□□ -1.77
YDR261C-DYDR261C-D AHP1P38013 176 aaKnown RBP4.01□□□□□ -1.77
YDR261C-DYDR261C-D POP3P53833 195 aaPredicted RBP4.01□□□□□ -1.77
YDR261C-DYDR261C-D IRC20Q06554 1556 aa4.01□□□□□ -1.77
YDR261C-DYDR261C-D MRS3P10566 314 aa4.01□□□□□ -1.77
YDR261C-DYDR261C-D LYS1P38998 373 aaRIP-Chip data4.01□□□□□ -1.77not detected
YDR261C-DYDR261C-D YGL230CP53074 147 aa4.01□□□□□ -1.77
YDR261C-DYDR261C-D PDR5P33302 1511 aaKnown RBP4.01□□□□□ -1.77
YDR261C-DYDR261C-D QCR9P22289 66 aa4.01□□□□□ -1.77
YDR261C-DYDR261C-D YIA6P40556 373 aa4.01□□□□□ -1.77
YDR261C-DYDR261C-D SHE1P38200 338 aa4□□□□□ -1.77
YDR261C-DYDR261C-D UBP8P50102 471 aa4□□□□□ -1.77
YDR261C-DYDR261C-D YGL034CP53186 121 aa4□□□□□ -1.77
YDR261C-DYDR261C-D TIM10P87108 93 aa4□□□□□ -1.77
YDR261C-DYDR261C-D GPB1Q08886 897 aa4□□□□□ -1.77
YDR261C-DYDR261C-D ERG2P32352 222 aa4□□□□□ -1.77
YDR261C-DYDR261C-D PAU2P32612 120 aa4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 109.5 ms