RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C PRM8P53174 237 aa1.41□□□□□ -2.18
MSH6YDR097C MRPS16Q02608 121 aa1.41□□□□□ -2.18
MSH6YDR097C ECM11Q04110 302 aa1.41□□□□□ -2.18
MSH6YDR097C NEJ1Q06148 342 aa1.41□□□□□ -2.18
MSH6YDR097C SWC7Q06707 132 aa1.41□□□□□ -2.18
MSH6YDR097C FEX2Q08991 375 aa1.41□□□□□ -2.18
MSH6YDR097C GPM2Q12008 311 aa1.41□□□□□ -2.18
MSH6YDR097C MHF2Q3E829 80 aa1.41□□□□□ -2.18
MSH6YDR097C STT4P37297 1900 aa1.41□□□□□ -2.18
MSH6YDR097C REP2P03872 296 aa1.41□□□□□ -2.18
MSH6YDR097C YMR31P19955 123 aa1.41□□□□□ -2.18
MSH6YDR097C CAT2P32796 670 aaKnown RBP1.41□□□□□ -2.18
MSH6YDR097C RGI1P40043 161 aaPredicted RBP1.41□□□□□ -2.18
MSH6YDR097C ALG13P53178 202 aa1.41□□□□□ -2.18
MSH6YDR097C YGR050CP53231 118 aa1.41□□□□□ -2.18
MSH6YDR097C YPL113CQ02961 396 aa1.41□□□□□ -2.18
MSH6YDR097C GIM5Q04493 163 aa1.41□□□□□ -2.18
MSH6YDR097C ARC18Q05933 178 aaKnown RBP1.41□□□□□ -2.18
MSH6YDR097C YDR157WA0A023PZE8 133 aa1.4□□□□□ -2.18
MSH6YDR097C HTB1P02293 131 aaKnown RBP1.4□□□□□ -2.18
MSH6YDR097C HTB2P02294 131 aa1.4□□□□□ -2.18
MSH6YDR097C YBR121C-AP0C5L4 52 aa1.4□□□□□ -2.18
MSH6YDR097C PET54P10834 293 aa1.4□□□□□ -2.18
MSH6YDR097C CDC13P32797 924 aaKnown RBP1.4□□□□□ -2.18
MSH6YDR097C CAF4P36130 643 aa1.4□□□□□ -2.18
MSH6YDR097C RPF1P38805 295 aaKnown RBP1.4□□□□□ -2.18
MSH6YDR097C EDC3P39998 551 aaKnown RBP1.4□□□□□ -2.18
MSH6YDR097C RFC4P40339 323 aaKnown RBP1.4□□□□□ -2.18
MSH6YDR097C HPT1Q04178 221 aaKnown RBP1.4□□□□□ -2.18
MSH6YDR097C SPG4Q04438 115 aa1.4□□□□□ -2.18
MSH6YDR097C YDR124WQ04608 324 aa1.4□□□□□ -2.18
MSH6YDR097C YOL019WQ08157 551 aa1.4□□□□□ -2.18
MSH6YDR097C BRR2P32639 2163 aaKnown RBP1.4□□□□□ -2.19
MSH6YDR097C SPS19P32573 292 aaKnown RBP1.4□□□□□ -2.19
MSH6YDR097C YKR041WP36134 250 aa1.4□□□□□ -2.19
MSH6YDR097C ASP1P38986 381 aaPredicted RBP1.4□□□□□ -2.19
MSH6YDR097C PAM16P42949 149 aa1.4□□□□□ -2.19
MSH6YDR097C LSM7P53905 115 aaKnown RBP1.4□□□□□ -2.19
MSH6YDR097C APJ1P53940 528 aa1.4□□□□□ -2.19
MSH6YDR097C CRZ1P53968 678 aa1.4□□□□□ -2.19
MSH6YDR097C GOT1Q03554 138 aa1.4□□□□□ -2.19
MSH6YDR097C YMD8Q03697 442 aa1.4□□□□□ -2.19
MSH6YDR097C NNT1Q05874 261 aa1.4□□□□□ -2.19
MSH6YDR097C FAS1P07149 2051 aaKnown RBP1.4□□□□□ -2.19
MSH6YDR097C YMR316C-AI2HB70 103 aa1.4□□□□□ -2.19
MSH6YDR097C SPS2P08459 502 aa1.4□□□□□ -2.19
MSH6YDR097C YFR010W-AP0C5N0 62 aa1.4□□□□□ -2.19
MSH6YDR097C SPS18P32572 300 aa1.4□□□□□ -2.19
MSH6YDR097C YBL010CP32788 280 aa1.4□□□□□ -2.19
MSH6YDR097C SHE2P36068 246 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
MSH6YDR097C TIM17P39515 158 aa1.4□□□□□ -2.19
MSH6YDR097C GTT1P40582 234 aa1.4□□□□□ -2.19
MSH6YDR097C SNM1P40993 198 aa1.4□□□□□ -2.19
MSH6YDR097C MEP2P41948 499 aa1.4□□□□□ -2.19
MSH6YDR097C TIM13P53299 105 aa1.4□□□□□ -2.19
MSH6YDR097C ERV29P53337 310 aa1.4□□□□□ -2.19
MSH6YDR097C SSU72P53538 206 aaPredicted RBP1.4□□□□□ -2.19
MSH6YDR097C IGO1P53897 168 aa1.4□□□□□ -2.19
MSH6YDR097C FYV6P53913 173 aa1.4□□□□□ -2.19
MSH6YDR097C ARL3Q02804 198 aa1.4□□□□□ -2.19
MSH6YDR097C API2Q04413 109 aa1.4□□□□□ -2.19
MSH6YDR097C SCP1Q08873 200 aa1.4□□□□□ -2.19
MSH6YDR097C USB1Q12208 290 aaKnown RBP1.4□□□□□ -2.19
MSH6YDR097C RAX2Q12465 1220 aa1.4□□□□□ -2.19
MSH6YDR097C MRX4Q12467 430 aa1.4□□□□□ -2.19
MSH6YDR097C RPL21BQ12672 160 aaKnown RBP1.4□□□□□ -2.19
MSH6YDR097C DPM1P14020 267 aaKnown RBP1.39□□□□□ -2.19
MSH6YDR097C PRE7P23724 241 aaKnown RBP1.39□□□□□ -2.19
MSH6YDR097C SCO1P23833 295 aa1.39□□□□□ -2.19
MSH6YDR097C LDB16P25587 256 aa1.39□□□□□ -2.19
MSH6YDR097C YCR099CP25657 155 aa1.39□□□□□ -2.19
MSH6YDR097C EMP24P32803 203 aaKnown RBP1.39□□□□□ -2.19
MSH6YDR097C VPS51P36116 164 aa1.39□□□□□ -2.19
MSH6YDR097C TRM7P38238 310 aaKnown RBP1.39□□□□□ -2.19
MSH6YDR097C MED6P38782 295 aa1.39□□□□□ -2.19
MSH6YDR097C TEM1P38987 245 aa1.39□□□□□ -2.19
MSH6YDR097C SUR2P38992 349 aa1.39□□□□□ -2.19
MSH6YDR097C HPA3P39979 161 aa1.39□□□□□ -2.19
MSH6YDR097C YEL028WP39989 153 aa1.39□□□□□ -2.19
MSH6YDR097C POG1P40473 351 aa1.39□□□□□ -2.19
MSH6YDR097C BMT5P40493 336 aa1.39□□□□□ -2.19
MSH6YDR097C YJL016WP47072 561 aa1.39□□□□□ -2.19
MSH6YDR097C LSM8P47093 109 aaKnown RBP1.39□□□□□ -2.19
MSH6YDR097C YJR056CP47115 236 aa1.39□□□□□ -2.19
MSH6YDR097C ADO1P47143 340 aaKnown RBP1.39□□□□□ -2.19
MSH6YDR097C PSF1Q12488 208 aa1.39□□□□□ -2.19
MSH6YDR097C SUS1Q6WNK7 96 aa1.39□□□□□ -2.19
MSH6YDR097C IMP1P28627 190 aa1.39□□□□□ -2.19
MSH6YDR097C YOX1P34161 385 aa1.39□□□□□ -2.19
MSH6YDR097C TRR2P38816 342 aa1.39□□□□□ -2.19
MSH6YDR097C ECM14P38836 430 aa1.39□□□□□ -2.19
MSH6YDR097C PTH1P38876 190 aaKnown RBP1.39□□□□□ -2.19
MSH6YDR097C PRM10P42946 383 aa1.39□□□□□ -2.19
MSH6YDR097C BOL2P53082 120 aa1.39□□□□□ -2.19
MSH6YDR097C NQM1P53228 333 aaPredicted RBP1.39□□□□□ -2.19
MSH6YDR097C ABF2Q02486 183 aa1.39□□□□□ -2.19
MSH6YDR097C MSA1Q08471 629 aa1.39□□□□□ -2.19
MSH6YDR097C YOR283WQ12040 230 aaKnown RBP1.39□□□□□ -2.19
MSH6YDR097C PRR2Q12310 699 aa1.39□□□□□ -2.19
MSH6YDR097C EFG1Q3E705 233 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms