RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	YPL073C	P40323	161 aa		1.37	□□□□□ -2.19
SLU7	YDR088C	YMR099C	Q03161	297 aa	Known RBP	1.37	□□□□□ -2.19
SLU7	YDR088C	FUS2	Q05670	677 aa		1.37	□□□□□ -2.19
SLU7	YDR088C	YNL146C-A	Q3E7Z1	64 aa		1.37	□□□□□ -2.19
SLU7	YDR088C	UBR2	Q07963	1872 aa		1.37	□□□□□ -2.19
SLU7	YDR088C	YAR023C	D6VPM8	179 aa		1.36	□□□□□ -2.19
SLU7	YDR088C	UBC7	Q02159	165 aa		1.36	□□□□□ -2.19
SLU7	YDR088C	NAT3	Q06504	195 aa		1.36	□□□□□ -2.19
SLU7	YDR088C	YER134C	P40081	178 aa		1.35	□□□□□ -2.19
SLU7	YDR088C	IRC23	Q08416	157 aa		1.35	□□□□□ -2.19
SLU7	YDR088C	YML100W-A	Q8TGT0	57 aa		1.35	□□□□□ -2.19
SLU7	YDR088C	AIM2	P39721	246 aa		1.34	□□□□□ -2.19
SLU7	YDR088C	YNL247W	P53852	767 aa	Known RBP	1.34	□□□□□ -2.19
SLU7	YDR088C	DYN3	Q04949	312 aa		1.34	□□□□□ -2.19
SLU7	YDR088C	RNH202	Q05635	350 aa		1.34	□□□□□ -2.19
SLU7	YDR088C	AQY2	P0CD90	149 aa		1.33	□□□□□ -2.2
SLU7	YDR088C	SNF4	P12904	322 aa		1.33	□□□□□ -2.2
SLU7	YDR088C	PHO85	P17157	305 aa		1.33	□□□□□ -2.2
SLU7	YDR088C	YHL018W	P38744	120 aa	Predicted RBP	1.33	□□□□□ -2.2
SLU7	YDR088C	MTW1	P39731	289 aa		1.33	□□□□□ -2.2
SLU7	YDR088C	RIO2	P40160	425 aa	Known RBP	1.33	□□□□□ -2.2
SLU7	YDR088C	PDS1	P40316	373 aa	Predicted RBP	1.33	□□□□□ -2.2
SLU7	YDR088C	NOC4	Q06512	552 aa	Predicted RBP	1.33	□□□□□ -2.2
SLU7	YDR088C	YPR174C	Q06616	221 aa	Predicted RBP	1.33	□□□□□ -2.2
SLU7	YDR088C	YOL024W	Q08172	172 aa		1.33	□□□□□ -2.2
SLU7	YDR088C	MDM35	O60200	86 aa		1.32	□□□□□ -2.2
SLU7	YDR088C	MGT1	P26188	188 aa		1.32	□□□□□ -2.2
SLU7	YDR088C	FLX1	P40464	311 aa		1.32	□□□□□ -2.2
SLU7	YDR088C	YAE1	P47118	141 aa	Predicted RBP	1.32	□□□□□ -2.2
SLU7	YDR088C	RTC4	P53850	401 aa		1.32	□□□□□ -2.2
SLU7	YDR088C	YHR007C-A	Q07074	71 aa		1.32	□□□□□ -2.2
SLU7	YDR088C	FIT2	Q08906	153 aa		1.32	□□□□□ -2.2
SLU7	YDR088C	CYR1	P08678	2026 aa	Known RBP	1.32	□□□□□ -2.2
SLU7	YDR088C	TAH1	P25638	111 aa	Predicted RBP	1.31	□□□□□ -2.2
SLU7	YDR088C	PAM17	P36147	197 aa		1.31	□□□□□ -2.2
SLU7	YDR088C	YFL019C	P43576	117 aa		1.31	□□□□□ -2.2
SLU7	YDR088C	YMR295C	Q03559	197 aa		1.31	□□□□□ -2.2
SLU7	YDR088C	YLR031W	Q07978	186 aa		1.31	□□□□□ -2.2
SLU7	YDR088C	YLR036C	Q07986	203 aa		1.31	□□□□□ -2.2
SLU7	YDR088C	COX8	P04039	78 aa		1.3	□□□□□ -2.2
SLU7	YDR088C	TIR1	P10863	254 aa		1.3	□□□□□ -2.2
SLU7	YDR088C	TDA4	P47153	279 aa		1.3	□□□□□ -2.2
SLU7	YDR088C	YNL033W	P53964	284 aa		1.3	□□□□□ -2.2
SLU7	YDR088C	GRX8	Q05926	109 aa		1.3	□□□□□ -2.2
SLU7	YDR088C	PRP11	Q07350	266 aa	Predicted RBP	1.3	□□□□□ -2.2
SLU7	YDR088C	GRE1	Q08969	168 aa		1.3	□□□□□ -2.2
SLU7	YDR088C	VAR1	P02381	398 aa		1.29	□□□□□ -2.2
SLU7	YDR088C	TRX3	P25372	127 aa		1.29	□□□□□ -2.2
SLU7	YDR088C	HYR1	P40581	163 aa	Known RBP	1.29	□□□□□ -2.2
SLU7	YDR088C	DAD4	P69851	72 aa		1.29	□□□□□ -2.2
SLU7	YDR088C	DIG2	Q03373	323 aa	Known RBP	1.29	□□□□□ -2.2
SLU7	YDR088C	RCE1	Q03530	315 aa		1.29	□□□□□ -2.2
SLU7	YDR088C	YMR253C	Q04835	414 aa		1.29	□□□□□ -2.2
SLU7	YDR088C	BRX1	Q08235	291 aa	Known RBP	1.29	□□□□□ -2.2
SLU7	YDR088C	NSP1	P14907	823 aa	Known RBP	1.28	□□□□□ -2.2
SLU7	YDR088C	CAF4	P36130	643 aa		1.28	□□□□□ -2.2
SLU7	YDR088C	YEL008W	P40001	126 aa		1.28	□□□□□ -2.2
SLU7	YDR088C	YFH7	P43591	353 aa		1.28	□□□□□ -2.2
SLU7	YDR088C	GPI14	P47088	403 aa	Known RBP	1.28	□□□□□ -2.2
SLU7	YDR088C	NRK1	P53915	240 aa		1.28	□□□□□ -2.2
SLU7	YDR088C	CWC27	Q02770	301 aa		1.28	□□□□□ -2.2
SLU7	YDR088C	SNO1	Q03144	224 aa		1.28	□□□□□ -2.2
SLU7	YDR088C	SHH3	Q04487	196 aa		1.28	□□□□□ -2.2
SLU7	YDR088C	YMR252C	Q04814	134 aa		1.28	□□□□□ -2.2
SLU7	YDR088C	YMR315W	Q04869	349 aa	Known RBP	1.28	□□□□□ -2.2
SLU7	YDR088C	FYV12	Q08559	129 aa		1.28	□□□□□ -2.2
SLU7	YDR088C	YPR013C	Q12145	317 aa		1.28	□□□□□ -2.2
SLU7	YDR088C	YHR212W-A	P0CX91	67 aa		1.27	□□□□□ -2.21
SLU7	YDR088C	YCL042W	P25572	119 aa		1.27	□□□□□ -2.21
SLU7	YDR088C	YKR041W	P36134	250 aa		1.27	□□□□□ -2.21
SLU7	YDR088C	SPC25	P40014	221 aa		1.27	□□□□□ -2.21
SLU7	YDR088C	CUP9	P41817	306 aa		1.27	□□□□□ -2.21
SLU7	YDR088C	YFL065C	P43539	102 aa		1.27	□□□□□ -2.21
SLU7	YDR088C	THG1	P53215	237 aa	Known RBP	1.27	□□□□□ -2.21
SLU7	YDR088C	VPS71	Q03433	280 aa		1.27	□□□□□ -2.21
SLU7	YDR088C	AIM34	Q03673	198 aa		1.27	□□□□□ -2.21
SLU7	YDR088C	PST2	Q12335	198 aa	Known RBP	1.27	□□□□□ -2.21
SLU7	YDR088C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	1.26	□□□□□ -2.21	not detected
SLU7	YDR088C	ECM4	P36156	370 aa		1.26	□□□□□ -2.21
SLU7	YDR088C	YHL042W	P38729	150 aa		1.26	□□□□□ -2.21
SLU7	YDR088C	YEL067C	P39978	195 aa		1.26	□□□□□ -2.21
SLU7	YDR088C	EDC3	P39998	551 aa	Known RBP	1.26	□□□□□ -2.21
SLU7	YDR088C	TMA22	P47089	198 aa	Predicted RBP	1.26	□□□□□ -2.21
SLU7	YDR088C	HOP2	P53187	214 aa		1.26	□□□□□ -2.21
SLU7	YDR088C	PGA1	P53896	198 aa		1.26	□□□□□ -2.21
SLU7	YDR088C	YOR342C	Q12182	319 aa		1.26	□□□□□ -2.21
SLU7	YDR088C	IDP1	P21954	428 aa	Known RBP	1.25	□□□□□ -2.21
SLU7	YDR088C	NSG1	P38837	291 aa		1.25	□□□□□ -2.21
SLU7	YDR088C	HPA3	P39979	161 aa		1.25	□□□□□ -2.21
SLU7	YDR088C	YDL085C-A	Q3E7B7	68 aa	Known RBP	1.25	□□□□□ -2.21
SLU7	YDR088C	RPS24A	P0CX31	135 aa	Known RBP	1.24	□□□□□ -2.21
SLU7	YDR088C	RPS24B	P0CX32	135 aa	Known RBP	1.24	□□□□□ -2.21
SLU7	YDR088C	RPB7	P34087	171 aa		1.24	□□□□□ -2.21
SLU7	YDR088C	SHG1	P38337	142 aa		1.24	□□□□□ -2.21
SLU7	YDR088C	GIM3	P53900	129 aa		1.24	□□□□□ -2.21
SLU7	YDR088C	YPR014C	Q6B0W2	109 aa		1.24	□□□□□ -2.21
SLU7	YDR088C	AHC2	P25649	128 aa		1.23	□□□□□ -2.21
SLU7	YDR088C	ARO7	P32178	256 aa		1.23	□□□□□ -2.21
SLU7	YDR088C	SOK1	P40317	901 aa		1.23	□□□□□ -2.21
SLU7	YDR088C	SHH4	Q06236	168 aa		1.23	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 137.1 ms