RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C YPL062WQ02781 134 aa3.26□□□□□ -1.89
RPO21YDL140C ASR1Q06834 288 aa3.26□□□□□ -1.89
RPO21YDL140C SPC3Q12133 184 aa3.26□□□□□ -1.89
RPO21YDL140C RPS18AP0CX55 146 aaKnown RBP3.26□□□□□ -1.89
RPO21YDL140C RPS18BP0CX56 146 aaPredicted RBP3.26□□□□□ -1.89
RPO21YDL140C CYB5P40312 120 aa3.26□□□□□ -1.89
RPO21YDL140C YJL218WP40892 196 aaKnown RBP3.26□□□□□ -1.89
RPO21YDL140C VPS55P47111 140 aa3.26□□□□□ -1.89
RPO21YDL140C DAN1P47178 298 aa3.26□□□□□ -1.89
RPO21YDL140C PDR17P53844 350 aa3.26□□□□□ -1.89
RPO21YDL140C YCL001W-AP87012 153 aa3.26□□□□□ -1.89
RPO21YDL140C MAK3Q03503 176 aa3.26□□□□□ -1.89
RPO21YDL140C MET32Q12041 191 aa3.26□□□□□ -1.89
RPO21YDL140C YKL068W-AQ3E826 78 aa3.26□□□□□ -1.89
RPO21YDL140C PAU24P38155 120 aa3.26□□□□□ -1.89
RPO21YDL140C BXI1P48558 297 aa3.26□□□□□ -1.89
RPO21YDL140C YGL185CP53100 379 aa3.26□□□□□ -1.89
RPO21YDL140C YIF1P53845 314 aaKnown RBP3.26□□□□□ -1.89
RPO21YDL140C SED1Q01589 338 aa3.26□□□□□ -1.89
RPO21YDL140C ATS1P31386 333 aa3.25□□□□□ -1.89
RPO21YDL140C QDR3P38227 689 aa3.25□□□□□ -1.89
RPO21YDL140C YFR045WP43617 309 aa3.25□□□□□ -1.89
RPO21YDL140C NIT3P49954 291 aa3.25□□□□□ -1.89
RPO21YDL140C TPC1P53257 314 aa3.25□□□□□ -1.89
RPO21YDL140C RPL2AP0CX45 254 aaKnown RBP3.25□□□□□ -1.89
RPO21YDL140C RPL2BP0CX46 254 aaKnown RBP3.25□□□□□ -1.89
RPO21YDL140C RNA15P25299 296 aaPredicted RBP3.25□□□□□ -1.89
RPO21YDL140C PAU2P32612 120 aa3.25□□□□□ -1.89
RPO21YDL140C PTR2P32901 601 aa3.25□□□□□ -1.89
RPO21YDL140C BAP2P38084 609 aa3.25□□□□□ -1.89
RPO21YDL140C LST7P53237 242 aa3.25□□□□□ -1.89
RPO21YDL140C FSH2Q05015 223 aa3.25□□□□□ -1.89
RPO21YDL140C YPR063CQ12160 140 aa3.25□□□□□ -1.89
RPO21YDL140C ERS1P17261 260 aa3.25□□□□□ -1.89
RPO21YDL140C MTR2P34232 184 aaKnown RBP3.25□□□□□ -1.89
RPO21YDL140C SWD2P36104 329 aaPredicted RBP3.25□□□□□ -1.89
RPO21YDL140C YIP3P53633 176 aa3.25□□□□□ -1.89
RPO21YDL140C AEP3Q12089 606 aa3.25□□□□□ -1.89
RPO21YDL140C FRE6Q12473 712 aa3.25□□□□□ -1.89
RPO21YDL140C VAR1P02381 398 aa3.25□□□□□ -1.89
RPO21YDL140C YKR041WP36134 250 aa3.25□□□□□ -1.89
RPO21YDL140C PIR5P46999 287 aa3.25□□□□□ -1.89
RPO21YDL140C YLR413WQ06689 675 aa3.25□□□□□ -1.89
RPO21YDL140C YOR011W-AQ3E807 68 aa3.25□□□□□ -1.89
RPO21YDL140C YCR006CP25350 157 aa3.24□□□□□ -1.89
RPO21YDL140C AIM26P32858 118 aa3.24□□□□□ -1.89
RPO21YDL140C YIL077CP40508 320 aa3.24□□□□□ -1.89
RPO21YDL140C YJL028WP47062 111 aa3.24□□□□□ -1.89
RPO21YDL140C IGO1P53897 168 aa3.24□□□□□ -1.89
RPO21YDL140C GAT3Q07928 141 aa3.24□□□□□ -1.89
RPO21YDL140C RPL39P04650 51 aa3.24□□□□□ -1.89
RPO21YDL140C THI4P32318 326 aa3.24□□□□□ -1.89
RPO21YDL140C YBR242WP38331 238 aa3.24□□□□□ -1.89
RPO21YDL140C IMD2P38697 523 aaKnown RBP3.24□□□□□ -1.89
RPO21YDL140C QDR1P40475 563 aa3.24□□□□□ -1.89
RPO21YDL140C GAT1P43574 510 aa3.24□□□□□ -1.89
RPO21YDL140C MIC27P50945 234 aa3.24□□□□□ -1.89
RPO21YDL140C SMD1Q02260 146 aaPredicted RBP3.24□□□□□ -1.89
RPO21YDL140C PHO92Q06390 306 aa3.24□□□□□ -1.89
RPO21YDL140C YPL225WQ08971 146 aaKnown RBP3.24□□□□□ -1.89
RPO21YDL140C LAS17Q12446 633 aa3.24□□□□□ -1.89
RPO21YDL140C PET20Q99373 253 aa3.24□□□□□ -1.89
RPO21YDL140C SNF2P22082 1703 aa3.24□□□□□ -1.89
RPO21YDL140C SEC59P20048 519 aa3.24□□□□□ -1.89
RPO21YDL140C HYP2P23301 157 aaKnown RBP3.24□□□□□ -1.89
RPO21YDL140C YIL152WP40455 235 aa3.24□□□□□ -1.89
RPO21YDL140C ATP23P53722 227 aa3.24□□□□□ -1.89
RPO21YDL140C HCH1P53834 153 aa3.24□□□□□ -1.89
RPO21YDL140C ORM2Q06144 216 aa3.24□□□□□ -1.89
RPO21YDL140C FCY2P17064 533 aa3.24□□□□□ -1.89
RPO21YDL140C IMP1P28627 190 aa3.24□□□□□ -1.89
RPO21YDL140C ECM8P38246 354 aa3.24□□□□□ -1.89
RPO21YDL140C GAT2P40209 560 aa3.24□□□□□ -1.89
RPO21YDL140C YDR391CQ04170 232 aa3.24□□□□□ -1.89
RPO21YDL140C FYV7Q12247 151 aa3.24□□□□□ -1.89
RPO21YDL140C YMR030W-AQ3E760 96 aa3.24□□□□□ -1.89
RPO21YDL140C QCR7P00128 127 aa3.23□□□□□ -1.89
RPO21YDL140C IDH1P28834 360 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
RPO21YDL140C YBR209WP38311 105 aa3.23□□□□□ -1.89
RPO21YDL140C PAU7P39545 55 aa3.23□□□□□ -1.89
RPO21YDL140C PAU5P43575 122 aa3.23□□□□□ -1.89
RPO21YDL140C PAU12P53343 120 aa3.23□□□□□ -1.89
RPO21YDL140C TY2B-LR1P0C2J3 1770 aa3.23□□□□□ -1.89
RPO21YDL140C TY2B-FP0CX63 1770 aa3.23□□□□□ -1.89
RPO21YDL140C TY2B-GR2P0CX64 1770 aa3.23□□□□□ -1.89
RPO21YDL140C TY2B-CP25384 1770 aa3.23□□□□□ -1.89
RPO21YDL140C TY2B-DR2Q03494 1770 aa3.23□□□□□ -1.89
RPO21YDL140C TY1B-DR1Q03855 1755 aa3.23□□□□□ -1.89
RPO21YDL140C TY2B-DR3Q07791 1770 aaKnown RBP3.23□□□□□ -1.89
RPO21YDL140C TY2B-OR1Q12113 1770 aa3.23□□□□□ -1.89
RPO21YDL140C TY1B-BRQ12193 1756 aa3.23□□□□□ -1.89
RPO21YDL140C TY1B-GR3Q12316 1755 aa3.23□□□□□ -1.89
RPO21YDL140C TY2B-DR1Q12472 1770 aa3.23□□□□□ -1.89
RPO21YDL140C TY2B-OR2Q12501 1770 aa3.23□□□□□ -1.89
RPO21YDL140C TY1B-ORQ92393 1755 aa3.23□□□□□ -1.89
RPO21YDL140C YHL018WP38744 120 aaPredicted RBP3.23□□□□□ -1.89
RPO21YDL140C SNU23Q12368 194 aaPredicted RBP3.23□□□□□ -1.89
RPO21YDL140C AIM45Q12480 344 aaKnown RBP3.23□□□□□ -1.89
RPO21YDL140C BEM2P39960 2167 aaKnown RBP3.23□□□□□ -1.89
RPO21YDL140C COX9P07255 59 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms