RNA–Protein interactions for RNA: YDL128W

VCX1, Transcript of Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity, yeast

Gene VCX1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VCX1	YDL128W	FRM2	P37261	193 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	TAE1	P38340	232 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	YAL037W	P39728	267 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	SNO3	P43544	222 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	XPT1	P47165	209 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	HOL1	P53389	586 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	DUG3	P53871	357 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	CGI121	Q03705	181 aa	Known RBP	4.79	□□□□□ -1.64
VCX1	YDL128W	YML096W	Q04489	525 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	GIM5	Q04493	163 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	HRI1	Q05905	244 aa	Known RBP	4.79	□□□□□ -1.64
VCX1	YDL128W	CNL1	Q06333	122 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	NAT3	Q06504	195 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	ENB1	Q08299	606 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	CSM4	Q08955	156 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	TAD3	Q9URQ3	322 aa		4.79	□□□□□ -1.64
VCX1	YDL128W	RPS22A	P0C0W1	130 aa	Known RBP	4.78	□□□□□ -1.64
VCX1	YDL128W	YLL053C	P0CD98	152 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	CPR1	P14832	162 aa	Known RBP	4.78	□□□□□ -1.64
VCX1	YDL128W	RPB8	P20436	146 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	ERV1	P27882	189 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	CWP1	P28319	239 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	ARO2	P28777	376 aa	Known RBP	4.78	□□□□□ -1.64
VCX1	YDL128W	SPS18	P32572	300 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	REC114	P32841	428 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	YER134C	P40081	178 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	PRE5	P40302	234 aa	Known RBP	4.78	□□□□□ -1.64
VCX1	YDL128W	BRR6	P53062	197 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	RPL21A	Q02753	160 aa	Known RBP	4.78	□□□□□ -1.64
VCX1	YDL128W	YPL077C	Q02831	240 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	IZH1	Q03419	316 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	ATG39	Q06159	398 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	PFA4	Q12006	378 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	RLM1	Q12224	676 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	RPL21B	Q12672	160 aa	Known RBP	4.78	□□□□□ -1.64
VCX1	YDL128W	SLO1	Q3E784	85 aa		4.78	□□□□□ -1.64
VCX1	YDL128W	ANB1	P19211	157 aa		4.77	□□□□□ -1.65
VCX1	YDL128W	QCR9	P22289	66 aa		4.77	□□□□□ -1.65
VCX1	YDL128W	PPA2	P28239	310 aa		4.77	□□□□□ -1.65
VCX1	YDL128W	SWD2	P36104	329 aa	Predicted RBP	4.77	□□□□□ -1.65
VCX1	YDL128W	SHB17	P36136	271 aa	Known RBP	4.77	□□□□□ -1.65
VCX1	YDL128W	POP2	P39008	433 aa		4.77	□□□□□ -1.65
VCX1	YDL128W	LOC1	P43586	204 aa	Predicted RBP	4.77	□□□□□ -1.65
VCX1	YDL128W	RPA43	P46669	326 aa		4.77	□□□□□ -1.65
VCX1	YDL128W	YJR096W	P47137	282 aa		4.77	□□□□□ -1.65
VCX1	YDL128W	PDR17	P53844	350 aa		4.77	□□□□□ -1.65
VCX1	YDL128W	YPL039W	Q03080	316 aa		4.77	□□□□□ -1.65
VCX1	YDL128W	YOR105W	Q08504	108 aa		4.77	□□□□□ -1.65
VCX1	YDL128W	YPL264C	Q08980	353 aa		4.77	□□□□□ -1.65
VCX1	YDL128W	YDR524C-B	Q3E6R4	66 aa		4.77	□□□□□ -1.65
VCX1	YDL128W	PAI3	P01094	68 aa		4.76	□□□□□ -1.65
VCX1	YDL128W	SCO1	P23833	295 aa		4.76	□□□□□ -1.65
VCX1	YDL128W	MRP49	P32388	137 aa		4.76	□□□□□ -1.65
VCX1	YDL128W	MTR2	P34232	184 aa	Known RBP	4.76	□□□□□ -1.65
VCX1	YDL128W	YHR180W	P38868	163 aa		4.76	□□□□□ -1.65
VCX1	YDL128W	GPI2	P46961	280 aa		4.76	□□□□□ -1.65
VCX1	YDL128W	ERG13	P54839	491 aa	Known RBP	4.76	□□□□□ -1.65
VCX1	YDL128W	NCE101	Q02820	53 aa		4.76	□□□□□ -1.65
VCX1	YDL128W	ADH6	Q04894	360 aa	Known RBP	4.76	□□□□□ -1.65
VCX1	YDL128W	YDR286C	Q05530	114 aa		4.76	□□□□□ -1.65
VCX1	YDL128W	YOL029C	Q08187	201 aa		4.76	□□□□□ -1.65
VCX1	YDL128W	YPL162C	Q12042	273 aa		4.76	□□□□□ -1.65
VCX1	YDL128W	TGS1	Q12052	315 aa		4.76	□□□□□ -1.65
VCX1	YDL128W	LEU9	Q12166	604 aa	Known RBP	4.76	□□□□□ -1.65
VCX1	YDL128W	SMT3	Q12306	101 aa	Known RBP	4.76	□□□□□ -1.65
VCX1	YDL128W	YLR365W	Q7LIF2	110 aa		4.76	□□□□□ -1.65
VCX1	YDL128W	MES1	P00958	751 aa	Known RBP	4.75	□□□□□ -1.65
VCX1	YDL128W	INH1	P01097	85 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	LSM2	P38203	95 aa	Known RBP	4.75	□□□□□ -1.65
VCX1	YDL128W	TEM1	P38987	245 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	YIL169C	P40442	995 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	ZIM17	P42844	174 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	YJL028W	P47062	111 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	TAF4	P50105	388 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	YGL230C	P53074	147 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	FHN1	P53279	174 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	TSA2	Q04120	196 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	LOA1	Q06508	300 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	PAM18	Q07914	168 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	MCP1	Q12106	302 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	FRE8	Q12209	686 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	YOR343C	Q12484	108 aa		4.75	□□□□□ -1.65
VCX1	YDL128W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.75	□□□□□ -1.65
VCX1	YDL128W	MBF1	O14467	151 aa	Known RBP	4.74	□□□□□ -1.65
VCX1	YDL128W	NOP1	P15646	327 aa	Known RBP	4.74	□□□□□ -1.65
VCX1	YDL128W	RPI1	P23250	407 aa	Known RBP	4.74	□□□□□ -1.65
VCX1	YDL128W	OCH1	P31755	480 aa		4.74	□□□□□ -1.65
VCX1	YDL128W	YPT53	P36019	220 aa		4.74	□□□□□ -1.65
VCX1	YDL128W	QDR3	P38227	689 aa		4.74	□□□□□ -1.65
VCX1	YDL128W	YHL044W	P38727	235 aa		4.74	□□□□□ -1.65
VCX1	YDL128W	WSC4	P38739	605 aa		4.74	□□□□□ -1.65
VCX1	YDL128W	BAT1	P38891	393 aa	Known RBP	4.74	□□□□□ -1.65
VCX1	YDL128W	UME6	P39001	836 aa		4.74	□□□□□ -1.65
VCX1	YDL128W	ELO1	P39540	310 aa		4.74	□□□□□ -1.65
VCX1	YDL128W	HAC1	P41546	238 aa		4.74	□□□□□ -1.65
VCX1	YDL128W	ARR3	Q06598	404 aa		4.74	□□□□□ -1.65
VCX1	YDL128W	MIM1	Q08176	113 aa		4.74	□□□□□ -1.65
VCX1	YDL128W	YLR050C	Q12155	161 aa	Known RBP	4.74	□□□□□ -1.65
VCX1	YDL128W	RDL1	Q12305	139 aa	Known RBP	4.74	□□□□□ -1.65
VCX1	YDL128W	YCR024C-B	Q3E7Z8	88 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 67.4 ms