RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	YMR317W	Q04893	1140 aa		5.07	□□□□□ -1.6
SUB2	YDL084W	YLR049C	Q12110	428 aa		5.07	□□□□□ -1.6
SUB2	YDL084W	YOR338W	Q99326	363 aa		5.07	□□□□□ -1.6
SUB2	YDL084W	Q0142	Q9ZZW4	58 aa		5.07	□□□□□ -1.6
SUB2	YDL084W	COX5A	P00424	153 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	AAC1	P04710	309 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	MRS1	P07266	363 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	HMRA1	P0CY11	126 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	UTR5	P32630	166 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	ZRT1	P32804	376 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	MSN2	P33748	704 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	FMP46	P36141	133 aa	Known RBP	5.06	□□□□□ -1.6
SUB2	YDL084W	AVT2	P39981	480 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	YPL073C	P40323	161 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	SMD3	P43321	101 aa	Known RBP	5.06	□□□□□ -1.6
SUB2	YDL084W	ATG18	P43601	500 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	HMS2	P47175	358 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	MSY1	P48527	492 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	GEP7	P53171	287 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	ERG26	P53199	349 aa	Known RBP	5.06	□□□□□ -1.6
SUB2	YDL084W	CAB4	P53332	305 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	CDC14	Q00684	551 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	VPS71	Q03433	280 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	INP1	Q03694	420 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	VBA1	Q04301	562 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	KEI1	Q06346	221 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	ACM1	Q08981	209 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	YOS1	Q3E834	85 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	YBR182C-A	Q8TGU6	64 aa		5.06	□□□□□ -1.6
SUB2	YDL084W	YRF1-2	P40105	1681 aa		5.05	□□□□□ -1.6
SUB2	YDL084W	MBF1	O14467	151 aa	Known RBP	5.05	□□□□□ -1.6
SUB2	YDL084W	YBR144C	P34215	104 aa		5.05	□□□□□ -1.6
SUB2	YDL084W	GPX2	P38143	162 aa		5.05	□□□□□ -1.6
SUB2	YDL084W	RPB11	P38902	120 aa		5.05	□□□□□ -1.6
SUB2	YDL084W	YFL065C	P43539	102 aa		5.05	□□□□□ -1.6
SUB2	YDL084W	TAM41	P53230	385 aa		5.05	□□□□□ -1.6
SUB2	YDL084W	PGA1	P53896	198 aa		5.05	□□□□□ -1.6
SUB2	YDL084W	LSM3	P57743	89 aa	Known RBP	5.05	□□□□□ -1.6
SUB2	YDL084W	PRM3	Q08931	133 aa		5.05	□□□□□ -1.6
SUB2	YDL084W	YPR203W	Q08994	102 aa		5.05	□□□□□ -1.6
SUB2	YDL084W	YLR149C	Q99296	730 aa		5.05	□□□□□ -1.6
SUB2	YDL084W	MRPL20	P22354	195 aa	Predicted RBP	5.04	□□□□□ -1.6
SUB2	YDL084W	MXR2	P25566	168 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	ACB1	P31787	87 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	YSC84	P32793	468 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	MRPS5	P33759	307 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	SOR1	P35497	357 aa	Known RBP	5.04	□□□□□ -1.6
SUB2	YDL084W	ATG12	P38316	186 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	MED6	P38782	295 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	VMA21	P41806	77 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	RRT5	P43607	289 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	ARP3	P47117	449 aa	Known RBP	5.04	□□□□□ -1.6
SUB2	YDL084W	TIS11	P47977	285 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	SMM1	P53720	384 aa	Known RBP	5.04	□□□□□ -1.6
SUB2	YDL084W	DUG3	P53871	357 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	STP3	Q05937	343 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	STP4	Q07351	490 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	SOR2	Q07786	357 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	YGK3	Q12222	375 aa	Predicted RBP	5.04	□□□□□ -1.6
SUB2	YDL084W	EAF3	Q12432	401 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	SUS1	Q6WNK7	96 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	DUR1,2	P32528	1835 aa	Known RBP	5.04	□□□□□ -1.6
SUB2	YDL084W	BCK1	Q01389	1478 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	MLP1	Q02455	1875 aa	Known RBP	5.04	□□□□□ -1.6
SUB2	YDL084W	BNI1	P41832	1953 aa		5.04	□□□□□ -1.6
SUB2	YDL084W	DAT1	P13483	248 aa	Known RBP	5.03	□□□□□ -1.6
SUB2	YDL084W	RPS2	P25443	254 aa	Known RBP	5.03	□□□□□ -1.6
SUB2	YDL084W	QRI5	P32344	111 aa		5.03	□□□□□ -1.6
SUB2	YDL084W	VMA11	P32842	164 aa		5.03	□□□□□ -1.6
SUB2	YDL084W	MCR1	P36060	302 aa	Known RBP	5.03	□□□□□ -1.6
SUB2	YDL084W	YKR070W	P36151	352 aa	Known RBP	5.03	□□□□□ -1.6
SUB2	YDL084W	INM1	P38710	295 aa		5.03	□□□□□ -1.6
SUB2	YDL084W	SPL2	P38839	148 aa		5.03	□□□□□ -1.6
SUB2	YDL084W	FLX1	P40464	311 aa		5.03	□□□□□ -1.6
SUB2	YDL084W	PRM5	P40476	318 aa		5.03	□□□□□ -1.6
SUB2	YDL084W	YGR164W	P53291	111 aa		5.03	□□□□□ -1.6
SUB2	YDL084W	GAS3	Q03655	524 aa		5.03	□□□□□ -1.6
SUB2	YDL084W	FIT1	Q04433	528 aa		5.03	□□□□□ -1.6
SUB2	YDL084W	YMR103C	Q04436	120 aa		5.03	□□□□□ -1.6
SUB2	YDL084W	FCF1	Q05498	189 aa	Predicted RBP	5.03	□□□□□ -1.6
SUB2	YDL084W	NAT5	Q08689	176 aa		5.03	□□□□□ -1.6
SUB2	YDL084W	RPA190	P10964	1664 aa	Known RBP	5.02	□□□□□ -1.61
SUB2	YDL084W	RPL7A	P05737	244 aa	Known RBP	5.02	□□□□□ -1.61
SUB2	YDL084W	RPL22A	P05749	121 aa	Known RBP	5.02	□□□□□ -1.61
SUB2	YDL084W	CPA1	P07258	411 aa	Known RBP	5.02	□□□□□ -1.61
SUB2	YDL084W	NOP1	P15646	327 aa	Known RBP	5.02	□□□□□ -1.61
SUB2	YDL084W	KAR4	P25583	335 aa		5.02	□□□□□ -1.61
SUB2	YDL084W	ARC40	P38328	384 aa	Known RBP	5.02	□□□□□ -1.61
SUB2	YDL084W	ERV29	P53337	310 aa		5.02	□□□□□ -1.61
SUB2	YDL084W	YNL033W	P53964	284 aa		5.02	□□□□□ -1.61
SUB2	YDL084W	YNL019C	P53975	284 aa		5.02	□□□□□ -1.61
SUB2	YDL084W	IRC15	Q02733	499 aa		5.02	□□□□□ -1.61
SUB2	YDL084W	YMR082C	Q04276	118 aa		5.02	□□□□□ -1.61
SUB2	YDL084W	SHH4	Q06236	168 aa		5.02	□□□□□ -1.61
SUB2	YDL084W	FIT3	Q08907	204 aa		5.02	□□□□□ -1.61
SUB2	YDL084W	YOR097C	Q12274	175 aa	Predicted RBP	5.02	□□□□□ -1.61
SUB2	YDL084W	PDR15	Q04182	1529 aa	Known RBP	5.02	□□□□□ -1.61
SUB2	YDL084W	MSI1	P13712	422 aa		5.01	□□□□□ -1.61
SUB2	YDL084W	GAS1	P22146	559 aa	Known RBP	5.01	□□□□□ -1.61
SUB2	YDL084W	PUP3	P25451	205 aa	Known RBP	5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms