RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	YIR035C	P40579	254 aa		4.62	□□□□□ -1.67
ATG12	YBR217W	VPS55	P47111	140 aa		4.62	□□□□□ -1.67
ATG12	YBR217W	ATG31	Q12421	196 aa		4.62	□□□□□ -1.67
ATG12	YBR217W	MRPL38	P35996	138 aa	Predicted RBP	4.61	□□□□□ -1.67
ATG12	YBR217W	YBR184W	P38299	523 aa		4.61	□□□□□ -1.67
ATG12	YBR217W	YPT31	P38555	223 aa	Known RBP	4.61	□□□□□ -1.67
ATG12	YBR217W	GEP4	P38812	185 aa		4.61	□□□□□ -1.67
ATG12	YBR217W	LST8	P41318	303 aa		4.61	□□□□□ -1.67
ATG12	YBR217W	YJL163C	P46996	555 aa		4.61	□□□□□ -1.67
ATG12	YBR217W	MRPL13	Q02204	264 aa		4.61	□□□□□ -1.67
ATG12	YBR217W	EST3	Q03096	181 aa		4.61	□□□□□ -1.67
ATG12	YBR217W	HOR7	Q05827	59 aa		4.61	□□□□□ -1.67
ATG12	YBR217W	IRC23	Q08416	157 aa		4.61	□□□□□ -1.67
ATG12	YBR217W	LAS17	Q12446	633 aa		4.61	□□□□□ -1.67
ATG12	YBR217W	ILV5	P06168	395 aa	Known RBP	4.6	□□□□□ -1.67
ATG12	YBR217W	TIP1	P27654	210 aa	Predicted RBP	4.6	□□□□□ -1.67
ATG12	YBR217W	YPS1	P32329	569 aa		4.6	□□□□□ -1.67
ATG12	YBR217W	RPA43	P46669	326 aa		4.6	□□□□□ -1.67
ATG12	YBR217W	MSO1	P53604	210 aa	Known RBP	4.6	□□□□□ -1.67
ATG12	YBR217W	DYN2	Q02647	92 aa		4.6	□□□□□ -1.67
ATG12	YBR217W	PBP4	Q07362	185 aa	Known RBP	4.6	□□□□□ -1.67
ATG12	YBR217W	RRT7	Q07829	113 aa		4.6	□□□□□ -1.67
ATG12	YBR217W	SCM3	Q12334	223 aa		4.6	□□□□□ -1.67
ATG12	YBR217W	MRPL23	Q12487	163 aa	Predicted RBP	4.6	□□□□□ -1.67
ATG12	YBR217W	YGL258W-A	Q3E740	77 aa		4.6	□□□□□ -1.67
ATG12	YBR217W	SOD1	P00445	154 aa	Known RBP	4.59	□□□□□ -1.67
ATG12	YBR217W	GRX2	P17695	143 aa	Known RBP	4.59	□□□□□ -1.67
ATG12	YBR217W	RPD3	P32561	433 aa		4.59	□□□□□ -1.67
ATG12	YBR217W	YKL162C	P36052	402 aa		4.59	□□□□□ -1.67
ATG12	YBR217W	YPC1	P38298	316 aa		4.59	□□□□□ -1.67
ATG12	YBR217W	SOH1	P38633	127 aa		4.59	□□□□□ -1.67
ATG12	YBR217W	RFC2	P40348	353 aa		4.59	□□□□□ -1.67
ATG12	YBR217W	YIF1	P53845	314 aa	Known RBP	4.59	□□□□□ -1.67
ATG12	YBR217W	YMR181C	Q03231	154 aa		4.59	□□□□□ -1.67
ATG12	YBR217W	HED1	Q03937	162 aa		4.59	□□□□□ -1.67
ATG12	YBR217W	YLR224W	Q05947	369 aa		4.59	□□□□□ -1.67
ATG12	YBR217W	STF2	P16965	84 aa		4.58	□□□□□ -1.68
ATG12	YBR217W	SAR1	P20606	190 aa	Known RBP	4.58	□□□□□ -1.68
ATG12	YBR217W	ERV1	P27882	189 aa		4.58	□□□□□ -1.68
ATG12	YBR217W	PPQ1	P32945	549 aa		4.58	□□□□□ -1.68
ATG12	YBR217W	YKL075C	P36083	450 aa		4.58	□□□□□ -1.68
ATG12	YBR217W	GLY1	P37303	387 aa	Known RBP	4.58	□□□□□ -1.68
ATG12	YBR217W	RRF1	P38771	230 aa		4.58	□□□□□ -1.68
ATG12	YBR217W	BOL3	P39724	118 aa		4.58	□□□□□ -1.68
ATG12	YBR217W	COX15	P40086	486 aa		4.58	□□□□□ -1.68
ATG12	YBR217W	TOS8	P53147	276 aa		4.58	□□□□□ -1.68
ATG12	YBR217W	YGR050C	P53231	118 aa		4.58	□□□□□ -1.68
ATG12	YBR217W	SSU72	P53538	206 aa	Predicted RBP	4.58	□□□□□ -1.68
ATG12	YBR217W	YNG1	Q08465	219 aa		4.58	□□□□□ -1.68
ATG12	YBR217W	RKI1	Q12189	258 aa		4.58	□□□□□ -1.68
ATG12	YBR217W	YHR212W-A	P0CX91	67 aa		4.57	□□□□□ -1.68
ATG12	YBR217W	MRS3	P10566	314 aa		4.57	□□□□□ -1.68
ATG12	YBR217W	CKS1	P20486	150 aa	Known RBP	4.57	□□□□□ -1.68
ATG12	YBR217W	MIG1	P27705	504 aa		4.57	□□□□□ -1.68
ATG12	YBR217W	PDC2	P32896	925 aa		4.57	□□□□□ -1.68
ATG12	YBR217W	NSA2	P40078	261 aa	Known RBP	4.57	□□□□□ -1.68
ATG12	YBR217W	HCH1	P53834	153 aa		4.57	□□□□□ -1.68
ATG12	YBR217W	GPI15	P53961	229 aa		4.57	□□□□□ -1.68
ATG12	YBR217W	AIM45	Q12480	344 aa	Known RBP	4.57	□□□□□ -1.68
ATG12	YBR217W	YLR146W-A	Q2V2P1	62 aa		4.57	□□□□□ -1.68
ATG12	YBR217W	COA2	Q3E823	68 aa		4.57	□□□□□ -1.68
ATG12	YBR217W	SEC22	P22214	214 aa		4.56	□□□□□ -1.68
ATG12	YBR217W	WSS1	P38838	269 aa		4.56	□□□□□ -1.68
ATG12	YBR217W	YAR068W	P39564	161 aa		4.56	□□□□□ -1.68
ATG12	YBR217W	RPL13B	P40212	199 aa	Known RBP	4.56	□□□□□ -1.68
ATG12	YBR217W	SYG1	P40528	902 aa		4.56	□□□□□ -1.68
ATG12	YBR217W	YJR111C	P47148	283 aa	Known RBP	4.56	□□□□□ -1.68
ATG12	YBR217W	PKP2	P53170	491 aa		4.56	□□□□□ -1.68
ATG12	YBR217W	CPD1	P53314	239 aa		4.56	□□□□□ -1.68
ATG12	YBR217W	VPS71	Q03433	280 aa		4.56	□□□□□ -1.68
ATG12	YBR217W	YMR090W	Q04304	227 aa	Known RBP	4.56	□□□□□ -1.68
ATG12	YBR217W	YPL264C	Q08980	353 aa		4.56	□□□□□ -1.68
ATG12	YBR217W	USV1	Q12132	391 aa		4.56	□□□□□ -1.68
ATG12	YBR217W	POC4	Q12245	148 aa	Predicted RBP	4.56	□□□□□ -1.68
ATG12	YBR217W	RPL13A	Q12690	199 aa	Predicted RBP	4.56	□□□□□ -1.68
ATG12	YBR217W	TRP4	P07285	380 aa	Predicted RBP	4.55	□□□□□ -1.68
ATG12	YBR217W	ACB1	P31787	87 aa		4.55	□□□□□ -1.68
ATG12	YBR217W	YEA6	P39953	335 aa		4.55	□□□□□ -1.68
ATG12	YBR217W	YGR219W	P53307	113 aa		4.55	□□□□□ -1.68
ATG12	YBR217W	SWT21	P53873	357 aa	Predicted RBP	4.55	□□□□□ -1.68
ATG12	YBR217W	DCS1	Q06151	350 aa		4.55	□□□□□ -1.68
ATG12	YBR217W	FRQ1	Q06389	190 aa		4.55	□□□□□ -1.68
ATG12	YBR217W	PRM3	Q08931	133 aa		4.55	□□□□□ -1.68
ATG12	YBR217W	MET32	Q12041	191 aa		4.55	□□□□□ -1.68
ATG12	YBR217W	PET494	P07390	489 aa	Predicted RBP	4.54	□□□□□ -1.68
ATG12	YBR217W	FCY2	P17064	533 aa		4.54	□□□□□ -1.68
ATG12	YBR217W	SLM6	P38343	150 aa		4.54	□□□□□ -1.68
ATG12	YBR217W	IMD2	P38697	523 aa	Known RBP	4.54	□□□□□ -1.68
ATG12	YBR217W	DOG2	P38773	246 aa		4.54	□□□□□ -1.68
ATG12	YBR217W	DOG1	P38774	246 aa		4.54	□□□□□ -1.68
ATG12	YBR217W	YER137C	P40083	148 aa	Known RBP	4.54	□□□□□ -1.68
ATG12	YBR217W	ERG25	P53045	309 aa		4.54	□□□□□ -1.68
ATG12	YBR217W	PNC1	P53184	216 aa	Known RBP	4.54	□□□□□ -1.68
ATG12	YBR217W	CAB4	P53332	305 aa		4.54	□□□□□ -1.68
ATG12	YBR217W	PDR17	P53844	350 aa		4.54	□□□□□ -1.68
ATG12	YBR217W	ACT1	P60010	375 aa	Known RBP	4.54	□□□□□ -1.68
ATG12	YBR217W	DID2	P69771	204 aa		4.54	□□□□□ -1.68
ATG12	YBR217W	YHP1	Q04116	353 aa		4.54	□□□□□ -1.68
ATG12	YBR217W	ERP1	Q05359	219 aa	Known RBP	4.54	□□□□□ -1.68
ATG12	YBR217W	RXT3	Q07458	294 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms