RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C MPD1Q12404 318 aaKnown RBP1.34□□□□□ -2.19
RPB5YBR154C YPR014CQ6B0W2 109 aa1.34□□□□□ -2.19
RPB5YBR154C RAS2P01120 322 aaKnown RBP1.33□□□□□ -2.2
RPB5YBR154C CPA1P07258 411 aaKnown RBP1.33□□□□□ -2.2
RPB5YBR154C DDI2P0CH63 225 aa1.33□□□□□ -2.2
RPB5YBR154C DDI3P0CH64 225 aa1.33□□□□□ -2.2
RPB5YBR154C KDX1P36005 433 aa1.33□□□□□ -2.2
RPB5YBR154C YHR022CP38763 256 aa1.33□□□□□ -2.2
RPB5YBR154C AVT2P39981 480 aa1.33□□□□□ -2.2
RPB5YBR154C YER134CP40081 178 aa1.33□□□□□ -2.2
RPB5YBR154C YNL217WP40152 326 aa1.33□□□□□ -2.2
RPB5YBR154C EAF6P47128 113 aa1.33□□□□□ -2.2
RPB5YBR154C DAN1P47178 298 aa1.33□□□□□ -2.2
RPB5YBR154C GPI17Q04080 534 aa1.33□□□□□ -2.2
RPB5YBR154C ATG40Q99325 256 aa1.33□□□□□ -2.2
RPB5YBR154C YAR023CD6VPM8 179 aa1.32□□□□□ -2.2
RPB5YBR154C QCR2P07257 368 aa1.32□□□□□ -2.2
RPB5YBR154C YKL102CP34249 101 aa1.32□□□□□ -2.2
RPB5YBR154C TVP38P36164 337 aa1.32□□□□□ -2.2
RPB5YBR154C FCY21P40039 528 aa1.32□□□□□ -2.2
RPB5YBR154C AGE2P40529 298 aa1.32□□□□□ -2.2
RPB5YBR154C YJL027CP47063 138 aaPredicted RBP1.32□□□□□ -2.2
RPB5YBR154C YNR077CP53758 84 aa1.32□□□□□ -2.2
RPB5YBR154C CYT2Q00873 224 aa1.32□□□□□ -2.2
RPB5YBR154C PLP1Q04004 230 aa1.32□□□□□ -2.2
RPB5YBR154C NAT3Q06504 195 aa1.32□□□□□ -2.2
RPB5YBR154C YOL014WQ08110 124 aa1.32□□□□□ -2.2
RPB5YBR154C YOR342CQ12182 319 aa1.32□□□□□ -2.2
RPB5YBR154C PEX11Q12462 236 aa1.32□□□□□ -2.2
RPB5YBR154C YML100W-AQ8TGT0 57 aa1.32□□□□□ -2.2
RPB5YBR154C PDR18P53756 1333 aa1.32□□□□□ -2.2
RPB5YBR154C POR1P04840 283 aaKnown RBP1.31□□□□□ -2.2
RPB5YBR154C CMD1P06787 147 aaKnown RBP1.31□□□□□ -2.2
RPB5YBR154C FZF1P32805 299 aa1.31□□□□□ -2.2
RPB5YBR154C NRG2P38082 220 aa1.31□□□□□ -2.2
RPB5YBR154C YBR209WP38311 105 aa1.31□□□□□ -2.2
RPB5YBR154C AME1P38313 324 aa1.31□□□□□ -2.2
RPB5YBR154C NSG1P38837 291 aa1.31□□□□□ -2.2
RPB5YBR154C DSE2P38844 325 aa1.31□□□□□ -2.2
RPB5YBR154C MTW1P39731 289 aa1.31□□□□□ -2.2
RPB5YBR154C EFM5P53200 248 aaKnown RBP1.31□□□□□ -2.2
RPB5YBR154C MPC3P53311 146 aa1.31□□□□□ -2.2
RPB5YBR154C YMR099CQ03161 297 aaKnown RBP1.31□□□□□ -2.2
RPB5YBR154C YLR053CQ12026 108 aa1.31□□□□□ -2.2
RPB5YBR154C YLR412C-AQ3E742 68 aa1.31□□□□□ -2.2
RPB5YBR154C BOL1Q3E793 110 aa1.31□□□□□ -2.2
RPB5YBR154C YLR236CA0A023PZG4 107 aa1.3□□□□□ -2.2
RPB5YBR154C MDH2P22133 377 aa1.3□□□□□ -2.2
RPB5YBR154C SPO13P23624 291 aa1.3□□□□□ -2.2
RPB5YBR154C UBC6P33296 250 aaPredicted RBP1.3□□□□□ -2.2
RPB5YBR154C GAA1P39012 614 aa1.3□□□□□ -2.2
RPB5YBR154C VTC1P40046 129 aaRIP-Chip data1.3□□□□□ -2.2not detected
RPB5YBR154C RFC2P40348 353 aa1.3□□□□□ -2.2
RPB5YBR154C AYR1P40471 297 aa1.3□□□□□ -2.2
RPB5YBR154C YFL019CP43576 117 aa1.3□□□□□ -2.2
RPB5YBR154C GPI14P47088 403 aaKnown RBP1.3□□□□□ -2.2
RPB5YBR154C VPS71Q03433 280 aa1.3□□□□□ -2.2
RPB5YBR154C DGK1Q12382 290 aa1.3□□□□□ -2.2
RPB5YBR154C TIR1P10863 254 aa1.29□□□□□ -2.2
RPB5YBR154C TFC1P32367 649 aa1.29□□□□□ -2.2
RPB5YBR154C YFR054CP43622 192 aa1.29□□□□□ -2.2
RPB5YBR154C XPT1P47165 209 aa1.29□□□□□ -2.2
RPB5YBR154C SAY1P53324 424 aa1.29□□□□□ -2.2
RPB5YBR154C MPA43P53583 542 aaPredicted RBP1.29□□□□□ -2.2
RPB5YBR154C HSK3P69852 69 aa1.29□□□□□ -2.2
RPB5YBR154C BUD25P85052 153 aa1.29□□□□□ -2.2
RPB5YBR154C YMR295CQ03559 197 aa1.29□□□□□ -2.2
RPB5YBR154C CUE4Q04201 117 aaPredicted RBP1.29□□□□□ -2.2
RPB5YBR154C SML1Q04964 104 aa1.29□□□□□ -2.2
RPB5YBR154C NSL1Q12143 216 aa1.29□□□□□ -2.2
RPB5YBR154C RDI1Q12434 202 aa1.29□□□□□ -2.2
RPB5YBR154C YHR086W-AQ3E746 53 aa1.29□□□□□ -2.2
RPB5YBR154C EDC3P39998 551 aaKnown RBP1.28□□□□□ -2.2
RPB5YBR154C PEP8P40335 379 aa1.28□□□□□ -2.2
RPB5YBR154C CUP9P41817 306 aa1.28□□□□□ -2.2
RPB5YBR154C ERJ5P43613 295 aaPredicted RBP1.28□□□□□ -2.2
RPB5YBR154C TTI2P47168 421 aa1.28□□□□□ -2.2
RPB5YBR154C POP3P53833 195 aaPredicted RBP1.28□□□□□ -2.2
RPB5YBR154C TMA20P89886 181 aaPredicted RBP1.28□□□□□ -2.2
RPB5YBR154C SHH3Q04487 196 aa1.28□□□□□ -2.2
RPB5YBR154C ANT1Q06497 328 aa1.28□□□□□ -2.2
RPB5YBR154C YDL180WQ12301 547 aa1.28□□□□□ -2.2
RPB5YBR154C MET5P47169 1442 aa1.28□□□□□ -2.2
RPB5YBR154C NSP1P14907 823 aaKnown RBP1.27□□□□□ -2.21
RPB5YBR154C SEC11P15367 167 aa1.27□□□□□ -2.21
RPB5YBR154C PHO85P17157 305 aa1.27□□□□□ -2.21
RPB5YBR154C FIG1P38224 298 aa1.27□□□□□ -2.21
RPB5YBR154C DER1P38307 211 aa1.27□□□□□ -2.21
RPB5YBR154C VMA22P38784 181 aa1.27□□□□□ -2.21
RPB5YBR154C TVP23P38962 199 aa1.27□□□□□ -2.21
RPB5YBR154C SPC25P40014 221 aa1.27□□□□□ -2.21
RPB5YBR154C NSA2P40078 261 aaKnown RBP1.27□□□□□ -2.21
RPB5YBR154C YFH7P43591 353 aa1.27□□□□□ -2.21
RPB5YBR154C KNH1P50112 268 aa1.27□□□□□ -2.21
RPB5YBR154C SOL1P50278 321 aa1.27□□□□□ -2.21
RPB5YBR154C MAK3Q03503 176 aa1.27□□□□□ -2.21
RPB5YBR154C RAD28Q12021 506 aa1.27□□□□□ -2.21
RPB5YBR154C DAS2Q12084 232 aa1.27□□□□□ -2.21
RPB5YBR154C RPS28BP0C0X0 67 aaKnown RBP1.26□□□□□ -2.21
RPB5YBR154C IDP1P21954 428 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms