RNA–Protein interactions for RNA: YBR055C

PRP6, Transcript of Splicing factor, yeastyeast

Gene PRP6, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP6YBR055C YNL010WP53981 241 aaKnown RBP1.71□□□□□ -2.14
PRP6YBR055C RRP17Q04031 235 aaPredicted RBP1.71□□□□□ -2.14
PRP6YBR055C ECM11Q04110 302 aa1.71□□□□□ -2.14
PRP6YBR055C PEX12Q04370 399 aa1.71□□□□□ -2.14
PRP6YBR055C RPS28AQ3E7X9 67 aaPredicted RBP1.71□□□□□ -2.14
PRP6YBR055C DPM1P14020 267 aaKnown RBP1.71□□□□□ -2.14
PRP6YBR055C GRX2P17695 143 aaKnown RBP1.71□□□□□ -2.14
PRP6YBR055C DER1P38307 211 aa1.71□□□□□ -2.14
PRP6YBR055C NVJ1P38881 321 aa1.71□□□□□ -2.14
PRP6YBR055C LSM4P40070 187 aaKnown RBP1.71□□□□□ -2.14
PRP6YBR055C YIL059CP40520 121 aa1.71□□□□□ -2.14
PRP6YBR055C AIM34Q03673 198 aa1.71□□□□□ -2.14
PRP6YBR055C HIS3P06633 220 aa1.7□□□□□ -2.14
PRP6YBR055C YHR032W-AP0C5N6 59 aa1.7□□□□□ -2.14
PRP6YBR055C YLR156WP0CE96 114 aa1.7□□□□□ -2.14
PRP6YBR055C YLR159WP0CE97 114 aa1.7□□□□□ -2.14
PRP6YBR055C YLR161WP0CE98 114 aa1.7□□□□□ -2.14
PRP6YBR055C ARC15P40518 154 aaRIP-Chip data1.7□□□□□ -2.14not detected
PRP6YBR055C SBH2P52871 88 aa1.7□□□□□ -2.14
PRP6YBR055C SUE1Q06524 206 aa1.7□□□□□ -2.14
PRP6YBR055C PET20Q99373 253 aa1.7□□□□□ -2.14
PRP6YBR055C SEC14P24280 304 aaKnown RBP1.7□□□□□ -2.14
PRP6YBR055C ARO7P32178 256 aa1.7□□□□□ -2.14
PRP6YBR055C ARO8P53090 500 aaKnown RBP1.7□□□□□ -2.14
PRP6YBR055C NUP49Q02199 472 aa1.7□□□□□ -2.14
PRP6YBR055C AHC2P25649 128 aa1.69□□□□□ -2.14
PRP6YBR055C SEC17P32602 292 aa1.69□□□□□ -2.14
PRP6YBR055C YER188WP40103 239 aa1.69□□□□□ -2.14
PRP6YBR055C YDR114CQ04597 100 aa1.69□□□□□ -2.14
PRP6YBR055C SHH4Q06236 168 aa1.69□□□□□ -2.14
PRP6YBR055C RIO1Q12196 484 aaKnown RBP1.69□□□□□ -2.14
PRP6YBR055C SAS5Q99314 248 aa1.69□□□□□ -2.14
PRP6YBR055C CMD1P06787 147 aaKnown RBP1.69□□□□□ -2.14
PRP6YBR055C CNB1P25296 175 aa1.69□□□□□ -2.14
PRP6YBR055C YKR032WP36127 104 aa1.69□□□□□ -2.14
PRP6YBR055C ICE2P40499 491 aa1.69□□□□□ -2.14
PRP6YBR055C YIR035CP40579 254 aa1.69□□□□□ -2.14
PRP6YBR055C FMP32P43557 207 aa1.69□□□□□ -2.14
PRP6YBR055C ARP3P47117 449 aaKnown RBP1.69□□□□□ -2.14
PRP6YBR055C TRM12Q04235 462 aa1.69□□□□□ -2.14
PRP6YBR055C YOR268CQ08734 132 aa1.69□□□□□ -2.14
PRP6YBR055C YLR053CQ12026 108 aa1.69□□□□□ -2.14
PRP6YBR055C KRE5P22023 1365 aa1.69□□□□□ -2.14
PRP6YBR055C CDC8P00572 216 aa1.68□□□□□ -2.14
PRP6YBR055C Q0255P03881 472 aa1.68□□□□□ -2.14
PRP6YBR055C RPS23AP0CX29 145 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C RPS23BP0CX30 145 aa1.68□□□□□ -2.14
PRP6YBR055C BET1P22804 142 aa1.68□□□□□ -2.14
PRP6YBR055C VMA11P32842 164 aa1.68□□□□□ -2.14
PRP6YBR055C MID2P36027 376 aa1.68□□□□□ -2.14
PRP6YBR055C EDC3P39998 551 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C BUD13P46947 266 aaPredicted RBP1.68□□□□□ -2.14
PRP6YBR055C PIR5P46999 287 aa1.68□□□□□ -2.14
PRP6YBR055C YJR111CP47148 283 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C APJ1P53940 528 aa1.68□□□□□ -2.14
PRP6YBR055C YDR249CQ03787 373 aa1.68□□□□□ -2.14
PRP6YBR055C DGA1Q08650 418 aa1.68□□□□□ -2.14
PRP6YBR055C MCP1Q12106 302 aa1.68□□□□□ -2.14
PRP6YBR055C SOD1P00445 154 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C PET9P18239 318 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C NSL1Q12143 216 aa1.68□□□□□ -2.14
PRP6YBR055C PSF1Q12488 208 aa1.68□□□□□ -2.14
PRP6YBR055C ADE6P38972 1358 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C FAS2P19097 1887 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C RPL9AP05738 191 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C RPB3P16370 318 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C CKS1P20486 150 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C YKL102CP34249 101 aa1.68□□□□□ -2.14
PRP6YBR055C RPL9BP51401 191 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C MAK3Q03503 176 aa1.68□□□□□ -2.14
PRP6YBR055C HPT1Q04178 221 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C HNT1Q04344 158 aaKnown RBP1.68□□□□□ -2.14
PRP6YBR055C DYN3Q04949 312 aa1.68□□□□□ -2.14
PRP6YBR055C YPR127WQ06494 345 aa1.68□□□□□ -2.14
PRP6YBR055C RDI1Q12434 202 aa1.68□□□□□ -2.14
PRP6YBR055C YPR014CQ6B0W2 109 aa1.68□□□□□ -2.14
PRP6YBR055C REP2P03872 296 aa1.67□□□□□ -2.14
PRP6YBR055C URA5P13298 226 aaKnown RBP1.67□□□□□ -2.14
PRP6YBR055C YCR023CP25351 611 aa1.67□□□□□ -2.14
PRP6YBR055C ACP1P32463 125 aa1.67□□□□□ -2.14
PRP6YBR055C SRP102P36057 244 aaPredicted RBP1.67□□□□□ -2.14
PRP6YBR055C AIM2P39721 246 aa1.67□□□□□ -2.14
PRP6YBR055C RSM25P40496 264 aa1.67□□□□□ -2.14
PRP6YBR055C PRM10P42946 383 aa1.67□□□□□ -2.14
PRP6YBR055C LSM1P47017 172 aaKnown RBP1.67□□□□□ -2.14
PRP6YBR055C YGR026WP53217 278 aa1.67□□□□□ -2.14
PRP6YBR055C SWP1Q02795 286 aa1.67□□□□□ -2.14
PRP6YBR055C GPI17Q04080 534 aa1.67□□□□□ -2.14
PRP6YBR055C AKR2Q12013 749 aa1.67□□□□□ -2.14
PRP6YBR055C MHT1Q12525 324 aa1.67□□□□□ -2.14
PRP6YBR055C PLP1Q04004 230 aa1.67□□□□□ -2.14
PRP6YBR055C YLR031WQ07978 186 aa1.67□□□□□ -2.14
PRP6YBR055C CTR2P38865 189 aa1.66□□□□□ -2.14
PRP6YBR055C AVT2P39981 480 aa1.66□□□□□ -2.14
PRP6YBR055C YER084WP40057 128 aa1.66□□□□□ -2.14
PRP6YBR055C SOK1P40317 901 aa1.66□□□□□ -2.14
PRP6YBR055C SMD3P43321 101 aaKnown RBP1.66□□□□□ -2.14
PRP6YBR055C HSK3P69852 69 aa1.66□□□□□ -2.14
PRP6YBR055C HKR1P41809 1802 aa1.66□□□□□ -2.14
PRP6YBR055C GSC2P40989 1895 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms