RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 EHD2Q9NZN4 543 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 RNF14Q9UBS8 474 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 CNOT8Q9UFF9 292 aaKnown RBP15.61■□□□□ 0.09
MKS1-211ENST00000581761 ITGA11Q9UKX5 1188 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 AGAP1Q9UPQ3 857 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 DERAQ9Y315 318 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 TRPV2Q9Y5S1 764 aa15.61■□□□□ 0.09
MKS1-211ENST00000581761 TRIP12Q14669 1992 aaPredicted RBP15.61■□□□□ 0.09
MKS1-211ENST00000581761 DNM1LO00429 736 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 CES2O00748 559 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 MYBL1P10243 752 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 P4HA1P13674 534 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 H2AFXP16104 143 aaPredicted RBP15.6■□□□□ 0.09
MKS1-211ENST00000581761 NSFP46459 744 aaKnown RBP15.6■□□□□ 0.09
MKS1-211ENST00000581761 RAP1GAPP47736 663 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 GDF6Q6KF10 455 aaPredicted RBP15.6■□□□□ 0.09
MKS1-211ENST00000581761 C11orf63Q6NUN7 778 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 PPP1R2P3Q6NXS1 205 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 NECAB2Q7Z6G3 386 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 MTERF4Q7Z6M4 381 aaKnown RBP15.6■□□□□ 0.09
MKS1-211ENST00000581761 PASD1Q8IV76 773 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 MCOLN2Q8IZK6 566 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 MSANTD4Q8NCY6 345 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 CXorf38Q8TB03 319 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 ZNF564Q8TBZ8 553 aaPredicted RBP15.6■□□□□ 0.09
MKS1-211ENST00000581761 CPA5Q8WXQ8 436 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 CYFIP2Q96F07 1278 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 FAXDC2Q96IV6 333 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 MS4A14Q96JA4 679 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 APOL6Q9BWW8 343 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 PARD6BQ9BYG5 372 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 ANKZF1Q9H8Y5 726 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 ABCB6Q9NP58 842 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 UVRAGQ9P2Y5 699 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 SCN10AQ9Y5Y9 1956 aa15.6■□□□□ 0.09
MKS1-211ENST00000581761 RECQL4O94761 1208 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 CFHP08603 1231 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 BRD2P25440 801 aaKnown RBP15.59■□□□□ 0.09
MKS1-211ENST00000581761 SSTR3P32745 418 aaPredicted RBP15.59■□□□□ 0.09
MKS1-211ENST00000581761 NOMO3P69849 1222 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 CENPCQ03188 943 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 ITIH3Q06033 890 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 KCNA10Q16322 511 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 WDR72Q3MJ13 1102 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 LIN9Q5TKA1 542 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 FAM228AQ86W67 206 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 ARRDC4Q8NCT1 418 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 ZNF606Q8WXB4 792 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 HPDLQ96IR7 371 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 SELENOOQ9BVL4 669 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 BCO2Q9BYV7 579 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 SDCBP2Q9H190 292 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 NXF3Q9H4D5 531 aaKnown RBP15.59■□□□□ 0.09
MKS1-211ENST00000581761 C11orf49Q9H6J7 331 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 SMYD3Q9H7B4 428 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 VRTNQ9H8Y1 702 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 CYP3A43Q9HB55 503 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 AVENQ9NQS1 362 aaPredicted RBP15.59■□□□□ 0.09
MKS1-211ENST00000581761 CHORDC1Q9UHD1 332 aaPredicted RBP15.59■□□□□ 0.09
MKS1-211ENST00000581761 CDY2AQ9Y6F7 541 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 RALGAPA2Q2PPJ7 1873 aa15.59■□□□□ 0.09
MKS1-211ENST00000581761 CEP104O60308 925 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 STAU1O95793 577 aaKnown RBP15.58■□□□□ 0.08
MKS1-211ENST00000581761 ASGR1P07306 291 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 CST5P28325 142 aaPredicted RBP15.58■□□□□ 0.08
MKS1-211ENST00000581761 TNNC1P63316 161 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 MESDQ14696 234 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 ZNF394Q53GI3 561 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 UBXN11Q5T124 520 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 CCDC70Q6NSX1 233 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 MMGT1Q8N4V1 131 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 SPATA4Q8NEY3 305 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 BEST2Q8NFU1 509 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 HES6Q96HZ4 224 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 SENP6Q9GZR1 1112 aaPredicted RBP15.58■□□□□ 0.08
MKS1-211ENST00000581761 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.08
MKS1-211ENST00000581761 PARP2Q9UGN5 583 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 NOC2LQ9Y3T9 749 aaKnown RBP15.58■□□□□ 0.08
MKS1-211ENST00000581761 HES2Q9Y543 173 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 NR2E3Q9Y5X4 410 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 CITO14578 2027 aa15.58■□□□□ 0.08
MKS1-211ENST00000581761 DDX3YO15523 660 aaKnown RBP15.57■□□□□ 0.08
MKS1-211ENST00000581761 CTSHP09668 335 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 CD19P15391 556 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 AKAP5P24588 427 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 CLCN6P51797 869 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 CDH8P55286 799 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 MON1BQ7L1V2 547 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 RNF180Q86T96 592 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 SESTD1Q86VW0 696 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 PHF13Q86YI8 300 aaPredicted RBP15.57■□□□□ 0.08
MKS1-211ENST00000581761 PCSK9Q8NBP7 692 aaKnown RBP15.57■□□□□ 0.08
MKS1-211ENST00000581761 PNKPQ96T60 521 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 C11orf70Q9BRQ4 267 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 CXCL16Q9H2A7 254 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 ADAM22Q9P0K1 906 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 CNTN3Q9P232 1028 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 PHF24Q9UPV7 400 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 ALG6Q9Y672 507 aa15.57■□□□□ 0.08
MKS1-211ENST00000581761 TLR3O15455 904 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms