RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 ATP6V1E1P36543 226 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 ASMTP46597 345 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 AARSP49588 968 aaKnown RBP eCLIP5.52□□□□□ -1.53
CAPN3-214ENST00000565274 CTCFP49711 727 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-214ENST00000565274 FMR1Q06787 632 aaKnown RBP eCLIP5.52□□□□□ -1.53
CAPN3-214ENST00000565274 ORC2Q13416 577 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-214ENST00000565274 IKBKEQ14164 716 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 CRYMQ14894 314 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 KARSQ15046 597 aaKnown RBP5.52□□□□□ -1.53
CAPN3-214ENST00000565274 HECTD3Q5T447 861 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 FCRLBQ6BAA4 426 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 NXNQ6DKJ4 435 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 FOXR2Q6PJQ5 311 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 GBP6Q6ZN66 633 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 TMTC3Q6ZXV5 915 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 C10orf67Q8IYJ2 551 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 C4orf32Q8N8J7 132 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 DAGLBQ8NCG7 672 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 PJA1Q8NG27 643 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 FAM81AQ8TBF8 368 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 FBLIM1Q8WUP2 373 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 TCP11Q8WWU5 503 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 SDCCAG3Q96C92 435 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 SHISA4Q96DD7 197 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 GIMAP5Q96F15 307 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 PAGE5Q96GU1 130 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 MAML3Q96JK9 1138 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 TCF12Q99081 682 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 UBAC1Q9BSL1 405 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 TEX13BQ9BXU2 312 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 ASPSCR1Q9BZE9 553 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 CDH19Q9H159 772 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 GLT8D2Q9H1C3 349 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 TNKS2Q9H2K2 1166 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 RABEP2Q9H5N1 569 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 VIPAS39Q9H9C1 493 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 PDE11AQ9HCR9 933 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 A1CFQ9NQ94 594 aaKnown RBP5.52□□□□□ -1.53
CAPN3-214ENST00000565274 SLC5A4Q9NY91 659 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 NKIRAS2Q9NYR9 191 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 VPS18Q9P253 973 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 LCMT1Q9UIC8 334 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 RWDD2AQ9UIY3 292 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 ITGB1BP2Q9UKP3 347 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 GRID1Q9ULK0 1009 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 SOX13Q9UN79 622 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 L1RE1Q9UN81 338 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 CARD8Q9Y2G2 431 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 MTF2Q9Y483 593 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-214ENST00000565274 PCDHB6Q9Y5E3 794 aa5.52□□□□□ -1.53
CAPN3-214ENST00000565274 TNKSO95271 1327 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 ITGB4P16144 1822 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 NUP98P52948 1817 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 A0A1W2PQC6 194 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 MEGF11A6BM72 1044 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 TTC34A8MYJ7 566 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 HNRNPCL2B2RXH8 293 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 H3BRB1 525 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 H7C1D1 291 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 LAD1O00515 517 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 PRKAB2O43741 272 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 HNRNPCL1O60812 293 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 RNGTTO60942 597 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 TIPRLO75663 272 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 EPN2O95208 641 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 TGDSO95455 350 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 HSPA8P11142 646 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 SCG2P13521 617 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 GCFC2P16383 781 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 PCSK2P16519 638 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CYP7A1P22680 504 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 MCM3P25205 808 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CALML3P27482 149 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 SLC16A2P36021 539 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 LONP1P36776 959 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 PPP1R2P41236 205 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 ECE1P42892 770 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CORO7P57737 925 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 B2MP61769 119 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 TGFB2P61812 414 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 BASP1P80723 227 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 GRIN1Q05586 938 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CHRNDQ07001 517 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 ZNF211Q13398 564 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 SMAD4Q13485 552 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 SQSTM1Q13501 440 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 KCNB1Q14721 858 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CASP8Q14790 479 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 OASLQ15646 514 aaKnown RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CRY1Q16526 586 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 PFKFB3Q16875 520 aaPredicted RBP5.51□□□□□ -1.53
CAPN3-214ENST00000565274 TUBB8Q3ZCM7 444 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 ANKDD1AQ495B1 522 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 CCDC14Q49A88 953 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 Q4G0T1 1027 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 FAM102BQ5T8I3 360 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 OGFOD2Q6N063 350 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 WDR93Q6P2C0 686 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 PAOXQ6QHF9 649 aa5.51□□□□□ -1.53
CAPN3-214ENST00000565274 RAD9BQ6WBX8 426 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms