RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
CAPN3-214ENST00000565274 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
CAPN3-214ENST00000565274 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
CAPN3-214ENST00000565274 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
CAPN3-214ENST00000565274 FOXD1Q16676 465 aa16.02■□□□□ 0.16
CAPN3-214ENST00000565274 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
CAPN3-214ENST00000565274 PIAS4Q8N2W9 510 aaPredicted RBP14.99□□□□□ -0.01
CAPN3-214ENST00000565274 MSH5O43196 834 aa14.98□□□□□ -0.01
CAPN3-214ENST00000565274 PPP6R1Q9UPN7 881 aa14.95□□□□□ -0.02
CAPN3-214ENST00000565274 ADRA2BP18089 450 aa14.93□□□□□ -0.02
CAPN3-214ENST00000565274 POTEDQ86YR6 584 aa14.78□□□□□ -0.04
CAPN3-214ENST00000565274 MAPK8IP2Q13387 824 aaPredicted RBP13.75□□□□□ -0.21
CAPN3-214ENST00000565274 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
CAPN3-214ENST00000565274 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
CAPN3-214ENST00000565274 PPP4R3CPQ6ZMV5 832 aa13.33□□□□□ -0.28
CAPN3-214ENST00000565274 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
CAPN3-214ENST00000565274 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
CAPN3-214ENST00000565274 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
CAPN3-214ENST00000565274 CACNB1Q02641 598 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-214ENST00000565274 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
CAPN3-214ENST00000565274 RNF39Q9H2S5 420 aa12.78□□□□□ -0.36
CAPN3-214ENST00000565274 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
CAPN3-214ENST00000565274 NPM3O75607 178 aaKnown RBP12.59□□□□□ -0.39
CAPN3-214ENST00000565274 C1QBPQ07021 282 aaKnown RBP12.58□□□□□ -0.4
CAPN3-214ENST00000565274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.53□□□□□ -0.4
CAPN3-214ENST00000565274 DNAJC5BQ9UF47 199 aa12.5□□□□□ -0.41
CAPN3-214ENST00000565274 KCNA4P22459 653 aa12.33□□□□□ -0.44
CAPN3-214ENST00000565274 U3KPZ7 1027 aaPredicted RBP12.2□□□□□ -0.46
CAPN3-214ENST00000565274 CAPN15O75808 1086 aa12.1□□□□□ -0.47
CAPN3-214ENST00000565274 SPINK5Q9NQ38 1064 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-214ENST00000565274 SLC4A2P04920 1241 aa12.04□□□□□ -0.48
CAPN3-214ENST00000565274 DSG3P32926 999 aa11.96□□□□□ -0.49
CAPN3-214ENST00000565274 TRHP20396 242 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-214ENST00000565274 ABCB7O75027 752 aa11.83□□□□□ -0.52
CAPN3-214ENST00000565274 APLP2Q06481 763 aa11.83□□□□□ -0.52
CAPN3-214ENST00000565274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-214ENST00000565274 HNRNPUL2Q1KMD3 747 aaKnown RBP11.79□□□□□ -0.52
CAPN3-214ENST00000565274 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
CAPN3-214ENST00000565274 SAMD1Q6SPF0 538 aaPredicted RBP11.74□□□□□ -0.53
CAPN3-214ENST00000565274 MYCNP04198 464 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-214ENST00000565274 SLC4A1APQ9BWU0 796 aaKnown RBP11.63□□□□□ -0.55
CAPN3-214ENST00000565274 POTEHQ6S545 545 aa11.57□□□□□ -0.56
CAPN3-214ENST00000565274 POLA2Q14181 598 aa11.53□□□□□ -0.56
CAPN3-214ENST00000565274 FOXD4L1Q9NU39 408 aa11.49□□□□□ -0.57
CAPN3-214ENST00000565274 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-214ENST00000565274 RBM42Q9BTD8 480 aaKnown RBP11.4□□□□□ -0.58
CAPN3-214ENST00000565274 ZBTB22O15209 634 aa11.31□□□□□ -0.6
CAPN3-214ENST00000565274 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-214ENST00000565274 CHRDL2Q6WN34 429 aa11.21□□□□□ -0.61
CAPN3-214ENST00000565274 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
CAPN3-214ENST00000565274 AKT1S1Q96B36 256 aa11.13□□□□□ -0.63
CAPN3-214ENST00000565274 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
CAPN3-214ENST00000565274 REM2Q8IYK8 340 aaPredicted RBP11.06□□□□□ -0.64
CAPN3-214ENST00000565274 FBLN2P98095 1184 aa10.97□□□□□ -0.65
CAPN3-214ENST00000565274 PITPNM1O00562 1244 aa10.95□□□□□ -0.66
CAPN3-214ENST00000565274 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
CAPN3-214ENST00000565274 SPDYE2BA6NHP3 402 aa10.87□□□□□ -0.67
CAPN3-214ENST00000565274 SPDYE6P0CI01 402 aa10.87□□□□□ -0.67
CAPN3-214ENST00000565274 SPDYE2Q495Y8 402 aa10.87□□□□□ -0.67
CAPN3-214ENST00000565274 MKRN4PQ13434 485 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-214ENST00000565274 FXR2P51116 673 aaKnown RBP eCLIP10.82□□□□□ -0.68
CAPN3-214ENST00000565274 HAX1O00165 279 aa10.81□□□□□ -0.68
CAPN3-214ENST00000565274 SP7Q8TDD2 431 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-214ENST00000565274 ZNF692Q9BU19 519 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-214ENST00000565274 CLEC11AQ9Y240 323 aa10.8□□□□□ -0.68
CAPN3-214ENST00000565274 SPDYE1Q8NFV5 336 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-214ENST00000565274 CSRNP3Q8WYN3 585 aa10.73□□□□□ -0.69
CAPN3-214ENST00000565274 SSUH2Q9Y2M2 353 aa10.7□□□□□ -0.7
CAPN3-214ENST00000565274 PRKAR2AP13861 404 aaKnown RBP10.69□□□□□ -0.7
CAPN3-214ENST00000565274 EVX2Q03828 476 aa10.65□□□□□ -0.7
CAPN3-214ENST00000565274 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
CAPN3-214ENST00000565274 PABPN1Q86U42 306 aaKnown RBP eCLIP10.64□□□□□ -0.71
CAPN3-214ENST00000565274 CHADLQ6NUI6 762 aa10.59□□□□□ -0.71
CAPN3-214ENST00000565274 PRR29P0C7W0 189 aa10.57□□□□□ -0.72
CAPN3-214ENST00000565274 C19orf67A6NJJ6 358 aa10.48□□□□□ -0.73
CAPN3-214ENST00000565274 GABBR2O75899 941 aa10.39□□□□□ -0.75
CAPN3-214ENST00000565274 FARP1Q9Y4F1 1045 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-214ENST00000565274 SPDYE4A6NLX3 237 aa10.34□□□□□ -0.75
CAPN3-214ENST00000565274 CD44P16070 742 aaKnown RBP10.34□□□□□ -0.75
CAPN3-214ENST00000565274 STAG3Q9UJ98 1225 aa10.28□□□□□ -0.76
CAPN3-214ENST00000565274 CREBZFQ9NS37 354 aa10.25□□□□□ -0.77
CAPN3-214ENST00000565274 ZRANB1Q9UGI0 708 aa10.21□□□□□ -0.77
CAPN3-214ENST00000565274 LHX8Q68G74 356 aa10.16□□□□□ -0.78
CAPN3-214ENST00000565274 POTEIP0CG38 1075 aa10.15□□□□□ -0.78
CAPN3-214ENST00000565274 NISCHQ9Y2I1 1504 aa10.13□□□□□ -0.79
CAPN3-214ENST00000565274 ZNF579Q8NAF0 562 aaKnown RBP10.12□□□□□ -0.79
CAPN3-214ENST00000565274 DCBLD2Q96PD2 775 aa10.12□□□□□ -0.79
CAPN3-214ENST00000565274 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
CAPN3-214ENST00000565274 CLCN6P51797 869 aa10.09□□□□□ -0.79
CAPN3-214ENST00000565274 NPM1P06748 294 aaKnown RBP eCLIP10.07□□□□□ -0.8
CAPN3-214ENST00000565274 GALR2O43603 387 aaPredicted RBP10.06□□□□□ -0.8
CAPN3-214ENST00000565274 PHF12Q96QT6 1004 aa10.06□□□□□ -0.8
CAPN3-214ENST00000565274 MNX1P50219 401 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-214ENST00000565274 SLC24A1O60721 1099 aa9.98□□□□□ -0.81
CAPN3-214ENST00000565274 PROM2Q8N271 834 aa9.97□□□□□ -0.81
CAPN3-214ENST00000565274 TSPYL2Q9H2G4 693 aaPredicted RBP9.96□□□□□ -0.82
CAPN3-214ENST00000565274 MIER1Q8N108 512 aa9.92□□□□□ -0.82
CAPN3-214ENST00000565274 MS4A3Q96HJ5 214 aa9.9□□□□□ -0.82
CAPN3-214ENST00000565274 PLEKHG5O94827 1062 aa9.88□□□□□ -0.83
CAPN3-214ENST00000565274 PELP1Q8IZL8 1130 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms