RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 KLK13Q9UKR3 277 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 TPCN1Q9ULQ1 816 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 PCDHA12Q9UN75 941 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 NUP210Q8TEM1 1887 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-215ENST00000555259 NUP205Q92621 2012 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 BPTFQ12830 3046 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 PATE3B3GLJ2 98 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 TRDMT1O14717 391 aaKnown RBP10.56□□□□□ -0.72
SCFD1-215ENST00000555259 EGFP01133 1207 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 GBP1P32455 592 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 RPL9P32969 192 aaKnown RBP10.56□□□□□ -0.72
SCFD1-215ENST00000555259 GRM5P41594 1212 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 NAMPTP43490 491 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 MCM2P49736 904 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 YARSP54577 528 aaKnown RBP10.56□□□□□ -0.72
SCFD1-215ENST00000555259 EPHB3P54753 998 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 DUSP4Q13115 394 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 UAP1L1Q3KQV9 507 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 EARS2Q5JPH6 523 aaKnown RBP10.56□□□□□ -0.72
SCFD1-215ENST00000555259 GPR158Q5T848 1215 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 NT5DC1Q5TFE4 455 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 PROSER1Q86XN7 944 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 DEPTORQ8TB45 409 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 PGLYRP2Q96PD5 576 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 KIFC3Q9BVG8 833 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 ATXN3LQ9H3M9 355 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 EBF1Q9UH73 591 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 GPSM3Q9Y4H4 160 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 PCNX2A6NKB5 2137 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 ABCA7Q8IZY2 2146 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 ADAMTS20P59510 1910 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 OTOL1A6NHN0 477 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-215ENST00000555259 CPLX1O14810 134 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 ZIC2O95409 532 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-215ENST00000555259 APBB3O95704 486 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 CAPNS1P04632 268 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 OR4Q2P0C623 313 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 KCNE1P15382 129 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 GABRR2P28476 465 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 WEE1P30291 646 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 MCM4P33991 863 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 ALDH1A3P47895 512 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 OSTNP61366 133 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 IRX4P78413 519 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 PMS2CLQ68D20 193 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 SYT13Q7L8C5 426 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 APBB1IPQ7Z5R6 666 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-215ENST00000555259 DNAJB7Q7Z6W7 309 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-215ENST00000555259 OXER1Q8TDS5 423 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 C18orf25Q96B23 403 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-215ENST00000555259 TBC1D32Q96NH3 1257 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 FAM83CQ9BQN1 747 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 CCDC94Q9BW85 323 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-215ENST00000555259 TTC12Q9H892 705 aaPredicted RBP10.55□□□□□ -0.72
SCFD1-215ENST00000555259 FBRSL1Q9HCM7 1045 aaKnown RBP10.55□□□□□ -0.72
SCFD1-215ENST00000555259 HPS4Q9NQG7 708 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 GKN1Q9NS71 199 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 THG1LQ9NWX6 298 aaKnown RBP10.55□□□□□ -0.72
SCFD1-215ENST00000555259 PCDHB8Q9UN66 801 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 SNX14Q9Y5W7 946 aa10.55□□□□□ -0.72
SCFD1-215ENST00000555259 MEFVO15553 781 aaPredicted RBP10.54□□□□□ -0.72
SCFD1-215ENST00000555259 OAZ2O95190 189 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 SPATA31C1P0DKV0 1188 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 EFNA5P52803 228 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 YWHAHQ04917 246 aaPredicted RBP10.54□□□□□ -0.72
SCFD1-215ENST00000555259 RUNX3Q13761 415 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 ARHGAP15Q53QZ3 475 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 C19orf48Q6RUI8 117 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 PDZD3Q86UT5 571 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 RPLP0P6Q8NHW5 317 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 PSMG2Q969U7 264 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 POLR3CQ9BUI4 534 aaPredicted RBP10.54□□□□□ -0.72
SCFD1-215ENST00000555259 SMG9Q9H0W8 520 aaKnown RBP10.54□□□□□ -0.72
SCFD1-215ENST00000555259 CDT1Q9H211 546 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 SLC32A1Q9H598 525 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 TASP1Q9H6P5 420 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 CNTN3Q9P232 1028 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 TNFSF13BQ9Y275 285 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 INVSQ9Y283 1065 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 ASB3Q9Y575 518 aa10.54□□□□□ -0.72
SCFD1-215ENST00000555259 SPAARA0A1B0GVQ0 90 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 FAM221BA6H8Z2 402 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 FAM205CA6NFA0 338 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 FGF19O95750 216 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 DRD1P21728 446 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 MARCKSP29966 332 aaPredicted RBP10.53□□□□□ -0.72
SCFD1-215ENST00000555259 TXKP42681 527 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 DGKEP52429 567 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 SIM1P81133 766 aaPredicted RBP10.53□□□□□ -0.72
SCFD1-215ENST00000555259 CYP4F8P98187 520 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 DMC1Q14565 340 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 PPP2R5AQ15172 486 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 CALCRLQ16602 461 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 FBXO43Q4G163 708 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 TRIM68Q6AZZ1 485 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 CENPPQ6IPU0 288 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 PADI6Q6TGC4 694 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 CYP2U1Q7Z449 544 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 C11orf74Q86VG3 221 aa10.53□□□□□ -0.72
SCFD1-215ENST00000555259 EBF3Q9H4W6 596 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms