RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 DDX27Q96GQ7 796 aaKnown RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 WDR83Q9BRX9 315 aaKnown RBP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 TRAIPQ9BWF2 469 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 COA1Q9GZY4 146 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 TMEM117Q9H0C3 514 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.14□□□□□ -1.59
LIMA1-214ENST00000552783 PARVGQ9HBI0 331 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 LNPEPQ9UIQ6 1025 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 LRCH1Q9Y2L9 728 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 SH3BP1Q9Y3L3 701 aa5.14□□□□□ -1.59
LIMA1-214ENST00000552783 DDTLA6NHG4 134 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-214ENST00000552783 RNASEH1O60930 286 aaKnown RBP5.13□□□□□ -1.59
LIMA1-214ENST00000552783 MTA2O94776 668 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 OR6B1O95007 311 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 APBA3O96018 575 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 ADRB2P07550 413 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 PLS3P13797 630 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 CYP11B1P15538 503 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 KLRC2P26717 231 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 RTP1P59025 263 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 MCL1Q07820 350 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 RASA3Q14644 834 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 CCDC6Q16204 474 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 LRRC36Q1X8D7 754 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 TSNAXIP1Q2TAA8 658 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 MSS51Q4VC12 460 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 CMPK2Q5EBM0 449 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 KAZNQ674X7 775 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 ALYREFQ86V81 257 aaKnown RBP5.13□□□□□ -1.59
LIMA1-214ENST00000552783 SIAH1Q8IUQ4 282 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 SLFN12Q8IYM2 578 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 SH3TC2Q8TF17 1288 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 ZFAND2BQ8WV99 257 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 AZIN2Q96A70 460 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 GRAMD1AQ96CP6 724 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 HAUS1Q96CS2 278 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 MKNK1Q9BUB5 465 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-214ENST00000552783 SAE1Q9UBE0 346 aaPredicted RBP5.13□□□□□ -1.59
LIMA1-214ENST00000552783 PI4KBQ9UBF8 816 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 IGLV3-22A0A075B6J6 115 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 A6NJR5 290 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 LYNP07948 512 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 ATP5DP30049 168 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 SSTR1P30872 391 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 GPX6P59796 221 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 OCRLQ01968 901 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 SLC34A1Q06495 639 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 CETN1Q12798 172 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 ALCAMQ13740 583 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 AOC3Q16853 763 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 TXNRD3NBQ6F5E7 133 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 RNF111Q6ZNA4 994 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 OTOP1Q7RTM1 612 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 ARHGAP22Q7Z5H3 698 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 TREML1Q86YW5 311 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 ANKRD35Q8N283 1001 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 CERS5Q8N5B7 392 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 ATL2Q8NHH9 583 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 BTBD10Q9BSF8 475 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 QTRT2Q9H974 415 aaKnown RBP5.13□□□□□ -1.59
LIMA1-214ENST00000552783 STOML1Q9UBI4 398 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 SCOCQ9UIL1 159 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 DNPEPQ9ULA0 475 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.13□□□□□ -1.59
LIMA1-214ENST00000552783 ATRNL1Q5VV63 1379 aa5.13□□□□□ -1.59
LIMA1-214ENST00000552783 FAM237BA0A1B0GVD1 139 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 K7ENM7 598 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 C2CD2LO14523 706 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 DCTN3O75935 186 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 STK10O94804 968 aaKnown RBP5.12□□□□□ -1.59
LIMA1-214ENST00000552783 NDUFB10O96000 172 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 BCRP11274 1271 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 CHRNA5P30532 468 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 HOXA7P31268 230 aaPredicted RBP5.12□□□□□ -1.59
LIMA1-214ENST00000552783 VAMP7P51809 220 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 JAG1P78504 1218 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 TCEAL1Q15170 157 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 VPS72Q15906 364 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 SLC45A4Q5BKX6 768 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 SYCP2LQ5T4T6 812 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 PPP1R18Q6NYC8 613 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 CBWD2Q8IUF1 395 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 ZBED8Q8IZ13 594 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 TCP10LQ8TDR4 215 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 MAIP1Q8WWC4 291 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 BICD1Q96G01 975 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 CCDC17Q96LX7 622 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 ANKRD27Q96NW4 1050 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 CYTH2Q99418 400 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 NDNQ99608 321 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 NMUR2Q9GZQ4 415 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 VPS37BQ9H9H4 285 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 PREBQ9HCU5 417 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 PICK1Q9NRD5 415 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 ETNK2Q9NVF9 386 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 GTF3C4Q9UKN8 822 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 PPM1HQ9ULR3 514 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 PCDHGB4Q9UN71 923 aa5.12□□□□□ -1.59
LIMA1-214ENST00000552783 PCDHGB5Q9Y5G0 923 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms