RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 DMXL1Q9Y485 3027 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 ACACBO00763 2458 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 ZNF292O60281 2723 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 MYH7BA7E2Y1 1941 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 PKD1L2Q7Z442 2459 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 IGKV6D-21A0A0A0MT36 114 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 FAM221AA4D161 298 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 SPDYE3A6NKU9 549 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 MEIS2O14770 477 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 TEX28O15482 410 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 GAS2O43903 313 aaKnown RBP4.6□□□□□ -1.67
SNHG1-220ENST00000544550 DEAF1O75398 565 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-220ENST00000544550 PAPSS2O95340 614 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-220ENST00000544550 C22orf31O95567 290 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 CYP11A1P05108 521 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 SSBP05455 408 aaKnown RBP eCLIP4.6□□□□□ -1.67
SNHG1-220ENST00000544550 HNRNPA1P09651 372 aaKnown RBP eCLIP4.6□□□□□ -1.67
SNHG1-220ENST00000544550 CEACAM1P13688 526 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 ITGB5P18084 799 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 ATF4P18848 351 aaPredicted RBP4.6□□□□□ -1.67
SNHG1-220ENST00000544550 CD72P21854 359 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 SFPQP23246 707 aaKnown RBP eCLIP4.6□□□□□ -1.67
SNHG1-220ENST00000544550 RDXP35241 583 aaKnown RBP4.6□□□□□ -1.67
SNHG1-220ENST00000544550 SLC11A1P49279 550 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 GLUD2P49448 558 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 NLRP11P59045 1033 aaKnown RBP4.6□□□□□ -1.67
SNHG1-220ENST00000544550 LRRC32Q14392 662 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 POU4F3Q15319 338 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 SNAP47Q5SQN1 464 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 RNF43Q68DV7 783 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 C1orf228Q6PIY5 440 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 LINC00114Q6XXX2 140 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 TBC1D10CQ8IV04 446 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 CKAP2LQ8IYA6 745 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 FEZF2Q8TBJ5 459 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 PI4K2BQ8TCG2 481 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 PANK1Q8TE04 598 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 GATAD2BQ8WXI9 593 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 GAL3ST3Q96A11 431 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 EVI5LQ96CN4 794 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 MSANTD3Q96H12 275 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 SPATA32Q96LK8 384 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 SCLT1Q96NL6 688 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 PPP1R16BQ96T49 567 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 RPP25Q9BUL9 199 aaKnown RBP4.6□□□□□ -1.67
SNHG1-220ENST00000544550 GBP3Q9H0R5 595 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 MIR1-1HGQ9H1L0 117 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 ADAMTS10Q9H324 1103 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 CNNM2Q9H8M5 875 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 RXFP1Q9HBX9 757 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 CBX8Q9HC52 389 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 ZNF302Q9NR11 478 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 NEUROG3Q9Y4Z2 214 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 CFAP47Q6ZTR5 3102 aa4.6□□□□□ -1.67
SNHG1-220ENST00000544550 B4E1Z4 1266 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 CACNA1GO43497 2377 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 TGM5O43548 720 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 ZNF623O75123 536 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 ECI2O75521 394 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 OFD1O75665 1012 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 EPN2O95208 641 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 ECEL1O95672 775 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 F13A1P00488 732 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 VTNP04004 478 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 CTSBP07858 339 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 POU2F2P09086 479 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 DARSP14868 501 aaKnown RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 MX1P20591 662 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 CSRP1P21291 193 aaKnown RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 HOXA6P31267 233 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 HOXA9P31269 272 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 KIF5BP33176 963 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 GPC3P51654 580 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 DSG1Q02413 1049 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 ARID5AQ03989 594 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 MYO7AQ13402 2215 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 FZD5Q13467 585 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 GRM4Q14833 912 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 SF3A2Q15428 464 aaKnown RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 IMMTQ16891 758 aaKnown RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 FNDC1Q4ZHG4 1894 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 SOWAHCQ53LP3 525 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 ARTNQ5T4W7 220 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 LIN9Q5TKA1 542 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 TWF2Q6IBS0 349 aaKnown RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 MIS18BP1Q6P0N0 1132 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 USP17L6PQ6QN14 398 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 BNC2Q6ZN30 1099 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 RTL10Q7L3V2 364 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 CACNA2D4Q7Z3S7 1137 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 GRASPQ7Z6J2 395 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 SLITRK4Q8IW52 837 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 TEX2Q8IWB9 1127 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 FANCMQ8IYD8 2048 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 SPEM1Q8N4L4 309 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 BCL7CQ8WUZ0 217 aaPredicted RBP4.59□□□□□ -1.67
SNHG1-220ENST00000544550 FAM3CQ92520 227 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 FGF13Q92913 245 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 TRIM11Q96F44 468 aa4.59□□□□□ -1.67
SNHG1-220ENST00000544550 SEC16BQ96JE7 1060 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms