RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 TMEM134Q9H6X4 195 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 SH2B1Q9NRF2 756 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-206ENST00000531430 GKN1Q9NS71 199 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 MAFFQ9ULX9 164 aa10.07□□□□□ -0.8
NEDD8-206ENST00000531430 CHD6Q8TD26 2715 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 ARNTLO00327 626 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 EPB41L2O43491 1005 aaKnown RBP10.06□□□□□ -0.8
NEDD8-206ENST00000531430 LARGE1O95461 756 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 ZNF806P0C7X5 589 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 GUCY2FP51841 1108 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 EPHA5P54756 1037 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 MLLT6P55198 1093 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-206ENST00000531430 CYP4F8P98187 520 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 PSMD2Q13200 908 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 PTPAQ15257 358 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 ITPRIPL2Q3MIP1 535 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 MGAT5BQ3V5L5 792 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 WDR44Q5JSH3 913 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 TTC38Q5R3I4 469 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 RNF43Q68DV7 783 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 BPIFB1Q8TDL5 484 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 GIPC2Q8TF65 315 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 GAB3Q8WWW8 586 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 GTF3C6Q969F1 213 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 BICD1Q96G01 975 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 GCNAQ96QF7 691 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 TMEM209Q96SK2 561 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 PLIN2Q99541 437 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 SEPT5Q99719 369 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-206ENST00000531430 CRISPLD1Q9H336 500 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 PTPRHQ9HD43 1115 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 POLR3BQ9NW08 1133 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-206ENST00000531430 CNTN3Q9P232 1028 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 INVSQ9Y283 1065 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 RBM19Q9Y4C8 960 aaKnown RBP10.06□□□□□ -0.8
NEDD8-206ENST00000531430 PHLPP2Q6ZVD8 1323 aa10.06□□□□□ -0.8
NEDD8-206ENST00000531430 OR6C75A6NL08 312 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 CLDN3O15551 220 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 ATG13O75143 517 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 KCNK5O95279 499 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 CXCL8P10145 99 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 U2AF2P26368 475 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■□□□□ 10.9
NEDD8-206ENST00000531430 PMLP29590 882 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 CDC25AP30304 524 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 NEK4P51957 841 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 SMTNP53814 917 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 CREB5Q02930 508 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 FCHO2Q0JRZ9 810 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 GRSF1Q12849 480 aaKnown RBP eCLIP10.05□□□□□ -0.8
NEDD8-206ENST00000531430 FOXC1Q12948 553 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 GPR17Q13304 367 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 NBR1Q14596 966 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 VEPH1Q14D04 833 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 OVOS1Q6IE37 1185 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 CENPPQ6IPU0 288 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 PSAPL1Q6NUJ1 521 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 PKN3Q6P5Z2 889 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 TAS1R3Q7RTX0 852 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 ITIH5Q86UX2 942 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 TMC8Q8IU68 726 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 SYNPOQ8N3V7 929 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 C8orf76Q96K31 380 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 DRC1Q96MC2 740 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 LPIN3Q9BQK8 851 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 LRRC3Q9BY71 257 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 DNAJC25Q9H1X3 360 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 EBF3Q9H4W6 596 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 DAXXQ9UER7 740 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-206ENST00000531430 CFAP47Q6ZTR5 3102 aa10.05□□□□□ -0.8
NEDD8-206ENST00000531430 C4orf47A7E2U8 309 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 PP2D1A8MPX8 630 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 LACTBL1A8MY62 500 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 OAZ2O95190 189 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 VNN2O95498 520 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 FGF19O95750 216 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 MUTP22033 750 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 GBP1P32455 592 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 PLCB2Q00722 1185 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 NOLC1Q14978 699 aaKnown RBP eCLIP10.04□□□□□ -0.8
NEDD8-206ENST00000531430 KRT79Q5XKE5 535 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 TRIM68Q6AZZ1 485 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 TCEAL6Q6IPX3 200 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 RINT1Q6NUQ1 792 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 CC2D1AQ6P1N0 951 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-206ENST00000531430 GAREM2Q75VX8 874 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 TTC30AQ86WT1 665 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 TTC9BQ8N6N2 239 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 TCEAL3Q969E4 200 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 LOXL4Q96JB6 756 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 HHIPQ96QV1 700 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 RUSC1Q9BVN2 902 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 SLC46A2Q9BY10 475 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 RAB34Q9BZG1 259 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 TASP1Q9H6P5 420 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 NOL7Q9UMY1 257 aaKnown RBP10.04□□□□□ -0.8
NEDD8-206ENST00000531430 ASB3Q9Y575 518 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 USP24Q9UPU5 2620 aa10.04□□□□□ -0.8
NEDD8-206ENST00000531430 PDCD11Q14690 1871 aaKnown RBP10.04□□□□□ -0.8
NEDD8-206ENST00000531430 MTMR11A4FU01 709 aa10.03□□□□□ -0.8
NEDD8-206ENST00000531430 C1QTNF9BB2RNN3 333 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms