RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 HPDLQ96IR7 371 aa15.02■□□□□ -0
USP46-209ENST00000514536 MAN1C1Q9NR34 630 aa15.02■□□□□ -0
USP46-209ENST00000514536 DZANK1Q9NVP4 752 aa15.02■□□□□ -0
USP46-209ENST00000514536 CTNND2Q9UQB3 1225 aa15.02■□□□□ -0
USP46-209ENST00000514536 BRWD1Q9NSI6 2320 aa15.02■□□□□ -0
USP46-209ENST00000514536 ARHGEF37A1IGU5 675 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 MBTPS2O43462 519 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 C1RP00736 705 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 C4BPAP04003 597 aaKnown RBP15.02□□□□□ -0.01
USP46-209ENST00000514536 CYP11A1P05108 521 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 EPB41P11171 864 aaKnown RBP15.02□□□□□ -0.01
USP46-209ENST00000514536 AP3M2P53677 418 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 STX17P56962 302 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 MYO1EQ12965 1108 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 SMAD4Q13485 552 aaKnown RBP15.02□□□□□ -0.01
USP46-209ENST00000514536 BIRC3Q13489 604 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 TRPC3Q13507 836 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 C1orf220Q5T0J3 134 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 RARS2Q5T160 578 aaKnown RBP15.02□□□□□ -0.01
USP46-209ENST00000514536 WSCD1Q658N2 575 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 SLC8B1Q6J4K2 584 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 INTS8Q75QN2 995 aaKnown RBP15.02□□□□□ -0.01
USP46-209ENST00000514536 METTL23Q86XA0 190 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 SMRP1Q8NCR6 262 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 ADAMTS19Q8TE59 1207 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 DUSP9Q99956 384 aaKnown RBP15.02□□□□□ -0.01
USP46-209ENST00000514536 DPP7Q9UHL4 492 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 DSEQ9UL01 958 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 SNX9Q9Y5X1 595 aa15.02□□□□□ -0.01
USP46-209ENST00000514536 IKBKBO14920 756 aa15.01□□□□□ -0.01
USP46-209ENST00000514536 TRIM49P0CI25 452 aa15.01□□□□□ -0.01
USP46-209ENST00000514536 TRIM49CP0CI26 452 aa15.01□□□□□ -0.01
USP46-209ENST00000514536 IL9P15248 144 aa15.01□□□□□ -0.01
USP46-209ENST00000514536 TDRD10Q5VZ19 366 aaKnown RBP15.01□□□□□ -0.01
USP46-209ENST00000514536 TTI2Q6NXR4 508 aa15.01□□□□□ -0.01
USP46-209ENST00000514536 TMC5Q6UXY8 1006 aa15.01□□□□□ -0.01
USP46-209ENST00000514536 ZC3H3Q8IXZ2 948 aaKnown RBP15.01□□□□□ -0.01
USP46-209ENST00000514536 FEZF2Q8TBJ5 459 aa15.01□□□□□ -0.01
USP46-209ENST00000514536 MKNK1Q9BUB5 465 aa15.01□□□□□ -0.01
USP46-209ENST00000514536 PLEKHA4Q9H4M7 779 aa15.01□□□□□ -0.01
USP46-209ENST00000514536 GDAP2Q9NXN4 497 aa15.01□□□□□ -0.01
USP46-209ENST00000514536 USP15Q9Y4E8 981 aaPredicted RBP15.01□□□□□ -0.01
USP46-209ENST00000514536 VWA8A3KMH1 1905 aa15.01□□□□□ -0.01
USP46-209ENST00000514536 BICDL2A1A5D9 508 aa15□□□□□ -0.01
USP46-209ENST00000514536 HUS1O60921 280 aa15□□□□□ -0.01
USP46-209ENST00000514536 MBD3O95983 291 aa15□□□□□ -0.01
USP46-209ENST00000514536 WEE2P0C1S8 567 aa15□□□□□ -0.01
USP46-209ENST00000514536 MYL6P60660 151 aa15□□□□□ -0.01
USP46-209ENST00000514536 ROR1Q01973 937 aa15□□□□□ -0.01
USP46-209ENST00000514536 PAK1Q13153 545 aa15□□□□□ -0.01
USP46-209ENST00000514536 CES5AQ6NT32 575 aa15□□□□□ -0.01
USP46-209ENST00000514536 ELMSAN1Q6PJG2 1045 aa15□□□□□ -0.01
USP46-209ENST00000514536 SV2AQ7L0J3 742 aa15□□□□□ -0.01
USP46-209ENST00000514536 ZNF461Q8TAF7 563 aa15□□□□□ -0.01
USP46-209ENST00000514536 HDAC7Q8WUI4 952 aa15□□□□□ -0.01
USP46-209ENST00000514536 ADAM7Q9H2U9 754 aa15□□□□□ -0.01
USP46-209ENST00000514536 SFXN1Q9H9B4 322 aa15□□□□□ -0.01
USP46-209ENST00000514536 CDH22Q9UJ99 828 aa15□□□□□ -0.01
USP46-209ENST00000514536 FBXW11Q9UKB1 542 aa15□□□□□ -0.01
USP46-209ENST00000514536 L1RE1Q9UN81 338 aa15□□□□□ -0.01
USP46-209ENST00000514536 FAM50BQ9Y247 325 aa15□□□□□ -0.01
USP46-209ENST00000514536 SCN1AP35498 2009 aa15□□□□□ -0.01
USP46-209ENST00000514536 CCDC195A0A1B0GUA6 201 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 WDR27A2RRH5 827 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 OR6C75A6NL08 312 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 RFPL2O75678 378 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 ABLIM3O94929 683 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 VNN1O95497 513 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 OR4Q2P0C623 313 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 GCLMP48507 274 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 ITIH3Q06033 890 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 PPP3CAQ08209 521 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 NCOA4Q13772 614 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 ZACNQ401N2 412 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 THEM5Q8N1Q8 247 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 PDCL2Q8N4E4 241 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 MLKLQ8NB16 471 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 CEP63Q96MT8 703 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 TMEM209Q96SK2 561 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 MMS19Q96T76 1030 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 OXCT2Q9BYC2 517 aaPredicted RBP14.99□□□□□ -0.01
USP46-209ENST00000514536 MMRN2Q9H8L6 949 aa14.99□□□□□ -0.01
USP46-209ENST00000514536 SLC16A3O15427 465 aaKnown RBP14.98□□□□□ -0.01
USP46-209ENST00000514536 ZMYND10O75800 440 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 CPB1P15086 417 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 ELF1P32519 619 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 NLRP12P59046 1061 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 MCCD1P59942 119 aaPredicted RBP14.98□□□□□ -0.01
USP46-209ENST00000514536 ENPEPQ07075 957 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 SMAD2Q15796 467 aaKnown RBP14.98□□□□□ -0.01
USP46-209ENST00000514536 SOWAHAQ2M3V2 549 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 WDR72Q3MJ13 1102 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 LIN9Q5TKA1 542 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 RNF19BQ6ZMZ0 732 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 FILIP1Q7Z7B0 1213 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 TOP6BLQ8N6T0 577 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 OR10T2Q8NGX3 314 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 SUSD6Q92537 303 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 ELMO3Q96BJ8 720 aa14.98□□□□□ -0.01
USP46-209ENST00000514536 NECAB3Q96P71 396 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms