RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 OBP2AQ9NY56 170 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 NEUROG3Q9Y4Z2 214 aa11.49□□□□□ -0.57
CLDND1-227ENST00000513452 NUP210Q8TEM1 1887 aaPredicted RBP11.49□□□□□ -0.57
CLDND1-227ENST00000513452 KIF26AQ9ULI4 1882 aaPredicted RBP11.49□□□□□ -0.57
CLDND1-227ENST00000513452 PATE3B3GLJ2 98 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 CDX4O14627 284 aaPredicted RBP11.48□□□□□ -0.57
CLDND1-227ENST00000513452 ZIC2O95409 532 aaPredicted RBP11.48□□□□□ -0.57
CLDND1-227ENST00000513452 APBB3O95704 486 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 EGFP01133 1207 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 GABRR2P28476 465 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 GRM5P41594 1212 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 ALDH1A3P47895 512 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 STK3Q13188 491 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 PTPAQ15257 358 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 ZNF568Q3ZCX4 644 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 XKR4Q5GH76 650 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 BMP2KLQ5H9B9 411 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 CPLX2Q6PUV4 134 aaKnown RBP11.48□□□□□ -0.57
CLDND1-227ENST00000513452 CYP2U1Q7Z449 544 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 BEST2Q8NFU1 509 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 KCNB2Q92953 911 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 TBC1D32Q96NH3 1257 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
CLDND1-227ENST00000513452 SMG9Q9H0W8 520 aaKnown RBP11.48□□□□□ -0.57
CLDND1-227ENST00000513452 CDT1Q9H211 546 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 THG1LQ9NWX6 298 aaKnown RBP11.48□□□□□ -0.57
CLDND1-227ENST00000513452 TPCN1Q9ULQ1 816 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 INVSQ9Y283 1065 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 MSRB2Q9Y3D2 182 aa11.48□□□□□ -0.57
CLDND1-227ENST00000513452 NBEAQ8NFP9 2946 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 OTOL1A6NHN0 477 aaPredicted RBP11.47□□□□□ -0.57
CLDND1-227ENST00000513452 SOAT2O75908 522 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 XRCC6P12956 609 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLDND1-227ENST00000513452 U2AF2P26368 475 aaKnown RBP eCLIP11.47□□□□□ -0.571e-8■■□□□ 13.8
CLDND1-227ENST00000513452 MARCKSP29966 332 aaPredicted RBP11.47□□□□□ -0.57
CLDND1-227ENST00000513452 RPL9P32969 192 aaKnown RBP11.47□□□□□ -0.57
CLDND1-227ENST00000513452 TXKP42681 527 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 EFNA5P52803 228 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 CYP4F8P98187 520 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 YWHAHQ04917 246 aaPredicted RBP11.47□□□□□ -0.57
CLDND1-227ENST00000513452 DUSP4Q13115 394 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 TOB2Q14106 344 aaPredicted RBP11.47□□□□□ -0.57
CLDND1-227ENST00000513452 PPP2R5AQ15172 486 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 SOWAHCQ53LP3 525 aaPredicted RBP11.47□□□□□ -0.57
CLDND1-227ENST00000513452 PMS2CLQ68D20 193 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 NAIF1Q69YI7 327 aaPredicted RBP11.47□□□□□ -0.57
CLDND1-227ENST00000513452 TRIM68Q6AZZ1 485 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 C19orf48Q6RUI8 117 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 ALKAL1Q6UXT8 129 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 TTC9BQ8N6N2 239 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 RPLP0P6Q8NHW5 317 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 CHFRQ96EP1 664 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 POLR3CQ9BUI4 534 aaPredicted RBP11.47□□□□□ -0.57
CLDND1-227ENST00000513452 GKN1Q9NS71 199 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 TNFSF13BQ9Y275 285 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 TIMM13Q9Y5L4 95 aaPredicted RBP11.47□□□□□ -0.57
CLDND1-227ENST00000513452 TRIP11Q15643 1979 aa11.47□□□□□ -0.57
CLDND1-227ENST00000513452 DMXL2Q8TDJ6 3036 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 SPAARA0A1B0GVQ0 90 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 ARHGEF35A5YM69 484 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 TRDMT1O14717 391 aaKnown RBP11.46□□□□□ -0.57
CLDND1-227ENST00000513452 DTNBO60941 627 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 FGF19O95750 216 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 SPATA31C1P0DKV0 1188 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 KCNE1P15382 129 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 XBP1P17861 261 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 CYP11B2P19099 503 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 PSMA5P28066 241 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 HSPA4P34932 840 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 DGKEP52429 567 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 IRX4P78413 519 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 NR5A1Q13285 461 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 DMC1Q14565 340 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 PADI6Q6TGC4 694 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 DNAJB7Q7Z6W7 309 aaPredicted RBP11.46□□□□□ -0.57
CLDND1-227ENST00000513452 TMEM130Q8N3G9 435 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 PSMG2Q969U7 264 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 IFT74Q96LB3 600 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 TPSD1Q9BZJ3 242 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 EBF3Q9H4W6 596 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 SLC32A1Q9H598 525 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 TASP1Q9H6P5 420 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 FBRSL1Q9HCM7 1045 aaKnown RBP11.46□□□□□ -0.57
CLDND1-227ENST00000513452 POLD4Q9HCU8 107 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 HPS4Q9NQG7 708 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 CNTN3Q9P232 1028 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 TUBGCP4Q9UGJ1 667 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 SLC27A5Q9Y2P5 690 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 GPSM3Q9Y4H4 160 aa11.46□□□□□ -0.57
CLDND1-227ENST00000513452 FLNBO75369 2602 aaKnown RBP11.46□□□□□ -0.58
CLDND1-227ENST00000513452 MTMR11A4FU01 709 aa11.45□□□□□ -0.58
CLDND1-227ENST00000513452 MEFVO15553 781 aaPredicted RBP11.45□□□□□ -0.58
CLDND1-227ENST00000513452 NEMFO60524 1076 aa11.45□□□□□ -0.58
CLDND1-227ENST00000513452 CDC45O75419 566 aa11.45□□□□□ -0.58
CLDND1-227ENST00000513452 MED24O75448 989 aa11.45□□□□□ -0.58
CLDND1-227ENST00000513452 HARSP12081 509 aaKnown RBP11.45□□□□□ -0.58
CLDND1-227ENST00000513452 ARSAP15289 507 aa11.45□□□□□ -0.58
CLDND1-227ENST00000513452 MAPK8P45983 427 aa11.45□□□□□ -0.58
CLDND1-227ENST00000513452 SIM1P81133 766 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms