RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 PTCH2Q9Y6C5 1203 aa8.67□□□□□ -1.02
HTT-209ENST00000512068 MACROD2A1Z1Q3 448 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 CTAGE9A4FU28 777 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 LACTBL1A8MY62 500 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 FOXN3O00409 490 aaPredicted RBP8.66□□□□□ -1.02
HTT-209ENST00000512068 ABLIM1O14639 778 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 GPR182O15218 404 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 TLR3O15455 904 aaKnown RBP8.66□□□□□ -1.02
HTT-209ENST00000512068 CAND2O75155 1236 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 LCA5LO95447 670 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 ATF7P17544 494 aaPredicted RBP8.66□□□□□ -1.02
HTT-209ENST00000512068 HOXC8P31273 242 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 MYO1EQ12965 1108 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 NFX1Q12986 1120 aaKnown RBP8.66□□□□□ -1.02
HTT-209ENST00000512068 PTK7Q13308 1070 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 CUL2Q13617 745 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 ZNF667Q5HYK9 610 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 HGSNATQ68CP4 663 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 JADE1Q6IE81 842 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 DPY19L2P1Q6NXN4 242 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 ZNF662Q6ZS27 426 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 IRF2BP2Q7Z5L9 587 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 SERINC5Q86VE9 423 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 CEP120Q8N960 986 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 BEST2Q8NFU1 509 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 OR5B17Q8NGF7 314 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 U2AF1L4Q8WU68 220 aaKnown RBP8.66□□□□□ -1.02
HTT-209ENST00000512068 DHX38Q92620 1227 aaKnown RBP8.66□□□□□ -1.02
HTT-209ENST00000512068 HPS1Q92902 700 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 AGPAT1Q99943 283 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 APOL6Q9BWW8 343 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 SEZ6LQ9BYH1 1024 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.66□□□□□ -1.02
HTT-209ENST00000512068 CYLDQ9NQC7 956 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 ADAMTS1Q9UHI8 967 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 AJAP1Q9UKB5 411 aaPredicted RBP8.66□□□□□ -1.02
HTT-209ENST00000512068 ITGA11Q9UKX5 1188 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 DERAQ9Y315 318 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 C2CD2Q9Y426 696 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 PCDHB4Q9Y5E5 795 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 PCDHGA11Q9Y5H2 935 aa8.66□□□□□ -1.02
HTT-209ENST00000512068 PTPRJQ12913 1337 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 TRIP11Q15643 1979 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 RBAK-RBAKDNI3L0D1 243 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 FAM189A1O60320 539 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 URI1O94763 535 aaPredicted RBP8.65□□□□□ -1.02
HTT-209ENST00000512068 NFICP08651 508 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 H2AFZP0C0S5 128 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 PNMA6AP0CW24 399 aaPredicted RBP8.65□□□□□ -1.02
HTT-209ENST00000512068 TIMP2P16035 220 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 ATICP31939 592 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 ATP1A2P50993 1020 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 WDR4P57081 412 aaKnown RBP8.65□□□□□ -1.02
HTT-209ENST00000512068 TNNC1P63316 161 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 RBP5P82980 135 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 CAP1Q01518 475 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 PAK2Q13177 524 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 PPP1R2P3Q6NXS1 205 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 ALKBH5Q6P6C2 394 aaKnown RBP8.65□□□□□ -1.02
HTT-209ENST00000512068 H2AFVQ71UI9 128 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 ZNF571Q7Z3V5 609 aaPredicted RBP8.65□□□□□ -1.02
HTT-209ENST00000512068 ZNF677Q86XU0 584 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 RPUSD2Q8IZ73 545 aaKnown RBP8.65□□□□□ -1.02
HTT-209ENST00000512068 TRIM58Q8NG06 486 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 HELQQ8TDG4 1101 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 CTNNBL1Q8WYA6 563 aaPredicted RBP8.65□□□□□ -1.02
HTT-209ENST00000512068 SHC3Q92529 594 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 ITPKCQ96DU7 683 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 NOX5Q96PH1 765 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 RPS6KC1Q96S38 1066 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 TSPAN18Q96SJ8 248 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 NAPGQ99747 312 aaPredicted RBP8.65□□□□□ -1.02
HTT-209ENST00000512068 NIF3L1Q9GZT8 377 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 CHST12Q9NRB3 414 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 SNTG2Q9NY99 539 aa8.65□□□□□ -1.02
HTT-209ENST00000512068 PUF60Q9UHX1 559 aaKnown RBP8.65□□□□□ -1.02
HTT-209ENST00000512068 ATP8B3O60423 1300 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 A0A087X0T9 212 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 A0A1W2PQ45 241 aaPredicted RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 A0A1W2PQY0 241 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 TMCO5BA8MYB1 307 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 CYP26A1O43174 497 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 RECQL4O94761 1208 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 ZIC2O95409 532 aaPredicted RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 VNN1O95497 513 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 ASS1P00966 412 aaKnown RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 CD4P01730 458 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 ITGB3P05106 788 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 FAM228BP0C875 321 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 ITGA4P13612 1032 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 HSPA6P17066 643 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 POLR2BP30876 1174 aaKnown RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 NOP2P46087 812 aaKnown RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 RAB27AP51159 221 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 MYL6P60660 151 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 TUBB2AQ13885 445 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 NAB2Q15742 525 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 ASTE1Q2TB18 679 aaPredicted RBP8.64□□□□□ -1.03
HTT-209ENST00000512068 TAF3Q5VWG9 929 aa8.64□□□□□ -1.03
HTT-209ENST00000512068 SPOPLQ6IQ16 392 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms