RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 PCDHB6Q9Y5E3 794 aa17.24■□□□□ 0.35
DDR1-250ENST00000503628 CITO14578 2027 aa17.24■□□□□ 0.35
DDR1-250ENST00000503628 EXTL3O43909 919 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 KCNK5O95279 499 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 CPB1P15086 417 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 KCNE1P15382 129 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 RPL9P32969 192 aaKnown RBP17.23■□□□□ 0.35
DDR1-250ENST00000503628 RAP1GAPP47736 663 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 PXNP49023 591 aaPredicted RBP17.23■□□□□ 0.35
DDR1-250ENST00000503628 CCINQ13939 588 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 COL9A2Q14055 689 aaPredicted RBP17.23■□□□□ 0.35
DDR1-250ENST00000503628 STXBP5Q5T5C0 1151 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 CACNA2D4Q7Z3S7 1137 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 KBTBD6Q86V97 674 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 ARID3BQ8IVW6 561 aaPredicted RBP17.23■□□□□ 0.35
DDR1-250ENST00000503628 GAB3Q8WWW8 586 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 DDX12PQ92771 950 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 ACO2Q99798 780 aaKnown RBP17.23■□□□□ 0.35
DDR1-250ENST00000503628 LSM14BQ9BX40 385 aaKnown RBP17.23■□□□□ 0.35
DDR1-250ENST00000503628 CDT1Q9H211 546 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 SMOC1Q9H4F8 434 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 ATG2BQ96BY7 2078 aa17.23■□□□□ 0.35
DDR1-250ENST00000503628 RPP40O75818 363 aaKnown RBP17.22■□□□□ 0.35
DDR1-250ENST00000503628 EPN2O95208 641 aa17.22■□□□□ 0.35
DDR1-250ENST00000503628 PDIA4P13667 645 aaKnown RBP17.22■□□□□ 0.35
DDR1-250ENST00000503628 MCM4P33991 863 aa17.22■□□□□ 0.35
DDR1-250ENST00000503628 RESTQ13127 1097 aa17.22■□□□□ 0.35
DDR1-250ENST00000503628 ZNF568Q3ZCX4 644 aa17.22■□□□□ 0.35
DDR1-250ENST00000503628 TMC8Q8IU68 726 aa17.22■□□□□ 0.35
DDR1-250ENST00000503628 SYNPOQ8N3V7 929 aa17.22■□□□□ 0.35
DDR1-250ENST00000503628 APPL2Q8NEU8 664 aa17.22■□□□□ 0.35
DDR1-250ENST00000503628 PTPRHQ9HD43 1115 aa17.22■□□□□ 0.35
DDR1-250ENST00000503628 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.22■□□□□ 0.35
DDR1-250ENST00000503628 YIPF1Q9Y548 306 aa17.22■□□□□ 0.35
DDR1-250ENST00000503628 EML5Q05BV3 1969 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 VNN2O95498 520 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 OR52Z1P0C646 297 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 RPA1P27694 616 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 MARCKSP29966 332 aaPredicted RBP17.21■□□□□ 0.35
DDR1-250ENST00000503628 ARHGAP29Q52LW3 1261 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 PLA2G2CQ5R387 149 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 PKN3Q6P5Z2 889 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 C4orf32Q8N8J7 132 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 BEST2Q8NFU1 509 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 ACAP3Q96P50 834 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 PGLYRP2Q96PD5 576 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 MKNK1Q9BUB5 465 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 DNAJC25Q9H1X3 360 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 CRISPLD1Q9H336 500 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 PCDHB8Q9UN66 801 aa17.21■□□□□ 0.35
DDR1-250ENST00000503628 C1QTNF9BB2RNN3 333 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 DPYSL4O14531 572 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 MEFVO15553 781 aaPredicted RBP17.2■□□□□ 0.34
DDR1-250ENST00000503628 OR4Q2P0C623 313 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 C1QTNF9P0C862 333 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 CCDC192P0DO97 292 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 EPHB3P54753 998 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 TNK2Q07912 1038 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 DUSP4Q13115 394 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 PSAPL1Q6NUJ1 521 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 KIFAP3Q92845 792 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 TARS2Q9BW92 718 aaKnown RBP17.2■□□□□ 0.34
DDR1-250ENST00000503628 ZSCAN16Q9H4T2 348 aaPredicted RBP17.2■□□□□ 0.34
DDR1-250ENST00000503628 CNTN3Q9P232 1028 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 ZMIZ1Q9ULJ6 1067 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 NUP210Q8TEM1 1887 aaPredicted RBP17.2■□□□□ 0.34
DDR1-250ENST00000503628 SPEGQ15772 3267 aa17.2■□□□□ 0.34
DDR1-250ENST00000503628 CCDC169A6NNP5 214 aa17.19■□□□□ 0.34
DDR1-250ENST00000503628 LAD1O00515 517 aa17.19■□□□□ 0.34
DDR1-250ENST00000503628 HOXB3P14651 431 aaPredicted RBP17.19■□□□□ 0.34
DDR1-250ENST00000503628 GAREM2Q75VX8 874 aa17.19■□□□□ 0.34
DDR1-250ENST00000503628 HAUS6Q7Z4H7 955 aa17.19■□□□□ 0.34
DDR1-250ENST00000503628 TMEM130Q8N3G9 435 aa17.19■□□□□ 0.34
DDR1-250ENST00000503628 ERMNQ8TAM6 284 aa17.19■□□□□ 0.34
DDR1-250ENST00000503628 TCHPQ9BT92 498 aa17.19■□□□□ 0.34
DDR1-250ENST00000503628 MRPL4Q9BYD3 311 aaKnown RBP17.19■□□□□ 0.34
DDR1-250ENST00000503628 PCDHGA5Q9Y5G8 931 aa17.19■□□□□ 0.34
DDR1-250ENST00000503628 TIMM13Q9Y5L4 95 aaPredicted RBP17.19■□□□□ 0.34
DDR1-250ENST00000503628 CCDC163A0A0D9SF12 145 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 OAZ2O95190 189 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 MCF2P10911 925 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 MPLP40238 635 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 ALDH1A3P47895 512 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 PEX3P56589 373 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 CACNB1Q02641 598 aaPredicted RBP17.18■□□□□ 0.34
DDR1-250ENST00000503628 YWHAHQ04917 246 aaPredicted RBP17.18■□□□□ 0.34
DDR1-250ENST00000503628 PLD1Q13393 1074 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 ECM1Q16610 540 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 GPR158Q5T848 1215 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 RNF43Q68DV7 783 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 UNQ6494/PRO21346Q6UXR6 183 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 TAS1R3Q7RTX0 852 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 ZC3H10Q96K80 434 aaKnown RBP17.18■□□□□ 0.34
DDR1-250ENST00000503628 TMEM209Q96SK2 561 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 BHMT2Q9H2M3 363 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 ATXN3LQ9H3M9 355 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 SLC27A5Q9Y2P5 690 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 ASPMQ8IZT6 3477 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 PHLPP2Q6ZVD8 1323 aa17.18■□□□□ 0.34
DDR1-250ENST00000503628 M0QZQ0 153 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms