RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 CPA2P48052 419 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 VCPP55072 806 aaKnown RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 SIK1P57059 783 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 NUP107P57740 925 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ARID5AQ03989 594 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 STRN3Q13033 797 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 TRIP10Q15642 601 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 KYNUQ16719 465 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 PHKG1Q16816 387 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 SPOPLQ6IQ16 392 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 TTC23LQ6PF05 361 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 GALNT7Q86SF2 657 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 SLC25A41Q8N5S1 370 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 LILRB1Q8NHL6 650 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ESR2Q92731 530 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 PGM2Q96G03 612 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 TANGO6Q9C0B7 1094 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 Q9H521 79 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ZNF287Q9HBT7 754 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-205ENST00000493587 CHKBQ9Y259 395 aa7.22□□□□□ -1.25
VPS13B-205ENST00000493587 ARHGAP42A6NI28 874 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 PRLP01236 227 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 ZNF12P17014 697 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 FGFR4P22455 802 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 UBA7P41226 1012 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 SLC1A1P43005 524 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 MGAT5Q09328 741 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 ITGADQ13349 1161 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 FAM98CQ17RN3 349 aaKnown RBP7.21□□□□□ -1.25
VPS13B-205ENST00000493587 RGS21Q2M5E4 152 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 KLHDC7AQ5VTJ3 777 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 KRT40Q6A162 431 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 USP43Q70EL4 1123 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 GATAD2AQ86YP4 633 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 FAM9CQ8IZT9 166 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 LILRB4Q8NHJ6 448 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 ZNF384Q8TF68 577 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 SLC7A6OSQ96CW6 309 aaPredicted RBP7.21□□□□□ -1.25
VPS13B-205ENST00000493587 MTMR8Q96EF0 704 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 FAM89AQ96GI7 184 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 PAGE5Q96GU1 130 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 TCF12Q99081 682 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 CADM1Q9BY67 442 aaKnown RBP7.21□□□□□ -1.25
VPS13B-205ENST00000493587 CAAP1Q9H8G2 361 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 EHMT1Q9H9B1 1298 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 POU2F3Q9UKI9 436 aa7.21□□□□□ -1.25
VPS13B-205ENST00000493587 PGRMC1O00264 195 aaKnown RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 ZWINTO95229 277 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 OAS1P00973 400 aaKnown RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 VCLP18206 1134 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 SLC5A2P31639 672 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 KLK7P49862 253 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 DNM2P50570 870 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 RAP1GDS1P52306 607 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 THOP1P52888 689 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 ANTXR2P58335 489 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 TFAP4Q01664 338 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 CETN1Q12798 172 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 LONRF1Q17RB8 773 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 EDRF1Q3B7T1 1238 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 IGSF11Q5DX21 431 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 DCDC5Q6ZRR9 648 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 RRAGAQ7L523 313 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 COL23A1Q86Y22 540 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 ELMOD2Q8IZ81 293 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 CHCHD4Q8N4Q1 142 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 NLRP7Q8WX94 980 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 BORCS5Q969J3 196 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 ZFRQ96KR1 1074 aaKnown RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 CNBD2Q96M20 576 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 CCDC77Q9BR77 488 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 SHCBP1LQ9BZQ2 653 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 NEK6Q9HC98 313 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 RSL24D1Q9UHA3 163 aaKnown RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 DAPK2Q9UIK4 370 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 ERVK-11Q9UQG0 969 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 SNX24Q9Y343 169 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 ANGPTL3Q9Y5C1 460 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 PCDHB2Q9Y5E7 798 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 NDUFB9Q9Y6M9 179 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 MYH4Q9Y623 1939 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 KLRF2D3W0D1 207 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 STARD3NLO95772 234 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 GH1P01241 217 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 FGRP09769 529 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 P4HA1P13674 534 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 UQCRBP14927 111 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 CPA3P15088 417 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 AMPD1P23109 780 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 KRT2P35908 639 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 EPS15P42566 896 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 HIRAP54198 1017 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 TPTEP56180 551 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 IKQ13123 557 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-205ENST00000493587 MTFR1Q15390 333 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 NIPAL1Q6NVV3 410 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 POTEHQ6S545 545 aa7.21□□□□□ -1.26
VPS13B-205ENST00000493587 UNC13DQ70J99 1090 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms