RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ANKRD62A6NC57 917 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 ARVCFO00192 962 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 DDX3XO00571 662 aaKnown RBP eCLIP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 CES2O00748 559 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 DYNC1LI2O43237 492 aaPredicted RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 DUSP11O75319 330 aaKnown RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 IL18RAPO95256 599 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 F2P00734 622 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 PROS1P07225 676 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 CLTAP09496 248 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 TMEM253P0C7T8 217 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 DLATP10515 647 aaKnown RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 GNAT1P11488 350 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 TCP1P17987 556 aaKnown RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 TNNI1P19237 187 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 TBXAS1P24557 533 aaPredicted RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 MARK3P27448 753 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 AXLP30530 894 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 NLRP11P59045 1033 aaKnown RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 ADAM17P78536 824 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 ARID5AQ03989 594 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 NCBP1Q09161 790 aaKnown RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 PPFIA1Q13136 1202 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 GRIK4Q16099 956 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 SGSM1Q2NKQ1 1148 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 ATF7IP2Q5U623 682 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 GJB7Q6PEY0 223 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 RSRC2Q7L4I2 434 aaKnown RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 SLFN11Q7Z7L1 901 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 TRIM50Q86XT4 487 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 SYCE1Q8N0S2 351 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 PDCL2Q8N4E4 241 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 LRRC71Q8N4P6 559 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 METTL13Q8N6R0 699 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 GPR161Q8N6U8 529 aaKnown RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 TAS1R2Q8TE23 839 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 ATRIPQ8WXE1 791 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 UBXN4Q92575 508 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 RABGGTAQ92696 567 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 SEMA4DQ92854 862 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 ZBTB45Q96K62 511 aaPredicted RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 MAP7D2Q96T17 732 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 HNRNPABQ99729 332 aaKnown RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 RTKNQ9BST9 563 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 KATNAL1Q9BW62 490 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 HAPLN2Q9GZV7 340 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 AP5M1Q9H0R1 490 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 PLEKHA5Q9HAU0 1116 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 PDE11AQ9HCR9 933 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 ZHX1Q9UKY1 873 aaPredicted RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 CDV3Q9UKY7 258 aaKnown RBP5.81□□□□□ -1.48
COL17A1-206ENST00000483876 ZMIZ1Q9ULJ6 1067 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 LHX6Q9UPM6 363 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 PCDHB2Q9Y5E7 798 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 BRWD1Q9NSI6 2320 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 DOCK5Q9H7D0 1870 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 NAV2Q8IVL1 2488 aa5.81□□□□□ -1.48
COL17A1-206ENST00000483876 A0A0U1RQG5 324 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 MACROD2A1Z1Q3 448 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 CTAGE15A4D2H0 777 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 LOC730098B7Z3J9 87 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 INO80B-WBP1J3KQ70 363 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 ADAMTS4O75173 837 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 RTN2O75298 545 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 TADA3O75528 432 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 ASS1P00966 412 aaKnown RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 CD4P01730 458 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 PFKMP08237 780 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 CTAGE8P0CG41 777 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 AKR1A1P14550 325 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 CYP11B1P15538 503 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 HOXC8P31273 242 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 ATICP31939 592 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 MATR3P43243 847 aaKnown RBP eCLIP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 ACOT2P49753 483 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 GJA9P57773 515 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 ERVK-21P61565 698 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 CDR2Q01850 454 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 CKAP4Q07065 602 aaKnown RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 SMAD4Q13485 552 aaKnown RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 COL19A1Q14993 1142 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 KCNA10Q16322 511 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 AMHR2Q16671 573 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 PTPROQ16827 1216 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 ARHGAP44Q17R89 818 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 TIGD5Q53EQ6 642 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 TCEAL5Q5H9L2 206 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 PPM1JQ5JR12 505 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 MEI1Q5TIA1 1274 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 TDRD10Q5VZ19 366 aaKnown RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 NFRKBQ6P4R8 1299 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 FAM43BQ6ZT52 329 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 ZNF572Q7Z3I7 529 aaPredicted RBP5.8□□□□□ -1.48
COL17A1-206ENST00000483876 CTAGE6Q86UF2 777 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 ARHGEF19Q8IW93 802 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 CTAGE4Q8IX94 777 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 RHOT2Q8IXI1 618 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 PPM1KQ8N3J5 372 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 TTC39CQ8N584 583 aa5.8□□□□□ -1.48
COL17A1-206ENST00000483876 OLIG1Q8TAK6 271 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms