RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 FOXN1O15353 648 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 RFX5P48382 616 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 RGS4P49798 205 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 KDSRQ06136 332 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 FAM102AQ5T9C2 384 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 SNX30Q5VWJ9 437 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L1Q7RTZ2 530 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 LRRC43Q8N309 656 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 FEZF2Q8TBJ5 459 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 ARL8AQ96BM9 186 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 ASB2Q96Q27 587 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 PRMT1Q99873 361 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 RAB6BQ9NRW1 208 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 UBA2Q9UBT2 640 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 ZNF229Q9UJW7 825 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 FAM32AQ9Y421 112 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 ANXA9O76027 345 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 HMOX2P30519 316 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 RAP1GDS1P52306 607 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 GCNT1Q02742 428 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 FAM83EQ2M2I3 478 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 TTC33Q6PID6 262 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 SULF1Q8IWU6 871 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 SCUBE1Q8IWY4 988 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 OR6B3Q8NGW1 331 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 RBM46Q8TBY0 533 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 KCNV2Q8TDN2 545 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 TMEM109Q9BVC6 243 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 TLR10Q9BXR5 811 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 GOLPH3Q9H4A6 298 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 ANKZF1Q9H8Y5 726 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 DIABLOQ9NR28 239 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 NCKIPSDQ9NZQ3 722 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 RSL24D1Q9UHA3 163 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 PRDM4Q9UKN5 801 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 PHTF1Q9UMS5 762 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 IGSF9BQ9UPX0 1349 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 EVPLLA8MZ36 301 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 TRIM49P0CI25 452 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 TRIM49CP0CI26 452 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 FCER1AP12319 257 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 RECQLP46063 649 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 GPC3P51654 580 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 C1QBPQ07021 282 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 FASTKD1Q53R41 847 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 COBLL1Q53SF7 1204 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 AAGABQ6PD74 315 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 RRM2BQ7LG56 351 aa6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 GSPT2Q8IYD1 628 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 USP13Q92995 863 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 NSUN4Q96CB9 384 aaKnown RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 PRMT7Q9NVM4 692 aaPredicted RBP6.43□□□□□ -1.38
PRPF4B-205ENST00000480058 TRIM49D1C9J1S8 452 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 KATNA1O75449 491 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 TDP2O95551 362 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 PSMA4P25789 261 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 RXRGP48443 463 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ITGA8P53708 1063 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 PRKAA1Q13131 559 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 TIMM50Q3ZCQ8 353 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 C3orf62Q6ZUJ4 267 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 GPR141Q7Z602 305 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ABI1Q8IZP0 508 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 THEM5Q8N1Q8 247 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 PPP1R14BQ96C90 147 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 TRIM51Q9BSJ1 452 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CCDC90BQ9GZT6 254 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CYP4F11Q9HBI6 524 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 RRN3Q9NYV6 651 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 HSPBP1Q9NZL4 362 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 VTI1BQ9UEU0 232 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ZNF609O15014 1411 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ZBBXA8MT70 800 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ALADP13716 330 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 PSMC3P17980 439 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 KRT20P35900 424 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 HK2P52789 917 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ERVK-24P63145 666 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 MSLNQ13421 630 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 LVRNQ6Q4G3 990 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 WDR60Q8WVS4 1066 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ARHGEF1Q92888 912 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 FAM84BQ96KN1 310 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 DDX50Q9BQ39 737 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CYP3A43Q9HB55 503 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 CORO1CQ9ULV4 474 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 STARD13Q9Y3M8 1113 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 HEY1Q9Y5J3 304 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 SORBS3O60504 671 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 WFS1O76024 890 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 EIF2AK2P19525 551 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 RPL5P46777 297 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 TSPY1Q01534 308 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 INAQ16352 499 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 ZNF568Q3ZCX4 644 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 BNC2Q6ZN30 1099 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 USP49Q70CQ1 688 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 KCTD1Q719H9 257 aa6.42□□□□□ -1.38
PRPF4B-205ENST00000480058 SH3RF1Q7Z6J0 888 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms