RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 RGS2P41220 211 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 PLOD1Q02809 727 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 OVGP1Q12889 678 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 KIF22Q14807 665 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 TDRPQ86YL5 185 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 SLF2Q8IX21 1173 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 ARHGAP24Q8N264 748 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 SYT2Q8N9I0 419 aaPredicted RBP15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 SKA1Q96BD8 255 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 COA1Q9GZY4 146 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 CHST7Q9NS84 486 aa15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.48■□□□□ 0.07
VPS9D1-201ENST00000389386 KDM3AQ9Y4C1 1321 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 A0A0G2JND7 137 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 EXOC1LA0A1B0GW35 172 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 BUD23O43709 281 aaKnown RBP15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 MAGEC1O60732 1142 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 CDC42EP5Q6NZY7 148 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 LVRNQ6Q4G3 990 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 PHLDB2Q86SQ0 1253 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 SLC20A1Q8WUM9 679 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 HAUS1Q96CS2 278 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 FAM161BQ96MY7 647 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 FBXO6Q9NRD1 293 aaPredicted RBP15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 ZDHHC7Q9NXF8 308 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 MTMR4Q9NYA4 1195 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 PCDHB13Q9Y5F0 798 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 ZNF862O60290 1169 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 MTA2O94776 668 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 STYK1Q6J9G0 422 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 CYP4F22Q6NT55 531 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 NET1Q7Z628 596 aaPredicted RBP15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 ATG4AQ8WYN0 398 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 ZNF653Q96CK0 615 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 OSBPL8Q9BZF1 889 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 SENP1Q9P0U3 644 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 ASTN1O14525 1302 aa15.47■□□□□ 0.07
VPS9D1-201ENST00000389386 POTEB3A0JP26 581 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 POTECB2RU33 542 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 HNRNPCP07910 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 KRT15P19012 456 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 PIK3CAP42336 1068 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 MAGEA4P43358 317 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 SLC12A3P55017 1021 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 AP2B1P63010 937 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 AOC3Q16853 763 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 POTEBQ6S5H4 581 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 KCTD1Q719H9 257 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 ZNF276Q8N554 614 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 PSPC1Q8WXF1 523 aaKnown RBP15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 TSPAN18Q96SJ8 248 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 TTC1Q99614 292 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 TSPYL2Q9H2G4 693 aaPredicted RBP15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 PCDHA12Q9UN75 941 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 GSTTP1A0A1W2PQM5 241 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 VILLO15195 856 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 CLIC2O15247 247 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 TPD52L2O43399 206 aaKnown RBP15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 SPOPO43791 374 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 BAG2O95816 211 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 RRM1P23921 792 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 VPS41P49754 854 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 ADARP55265 1226 aaKnown RBP15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 RIPOR1Q6ZS17 1223 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 ZNF554Q86TJ5 538 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 SFR1Q86XK3 245 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 RNF168Q8IYW5 571 aaPredicted RBP15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 PANX3Q96QZ0 392 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 IQCGQ9H095 443 aaKnown RBP15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 ARHGEF4Q9NR80 690 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 PPM1HQ9ULR3 514 aa15.46■□□□□ 0.07
VPS9D1-201ENST00000389386 FOXN3O00409 490 aaPredicted RBP15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 USP1O94782 785 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 EIF4BP23588 611 aaKnown RBP15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 ARFIP2P53365 341 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 CDK16Q00536 496 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 ZBTB16Q05516 673 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 ARHGAP44Q17R89 818 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 CCDC62Q6P9F0 684 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 LRRC6Q86X45 466 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 PDSS2Q86YH6 399 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 ABTB1Q969K4 478 aaPredicted RBP15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 BTBD6Q96KE9 485 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 TRIM55Q9BYV6 548 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 KCNK13Q9HB14 408 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 PCDH18Q9HCL0 1135 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 DDX25Q9UHL0 483 aaKnown RBP15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 SERPINB13Q9UIV8 391 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 A0A1W2PPM1 405 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 POC1B-GALNT4F8VUJ3 575 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 CDK4P11802 303 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 FMO5P49326 533 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 ACTR3P61158 418 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 MED21Q13503 144 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 TRMT5Q32P41 509 aaKnown RBP15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 MFSD4BQ5TF39 518 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 B3GNT6Q6ZMB0 384 aa15.45■□□□□ 0.06
VPS9D1-201ENST00000389386 RAPH1Q70E73 1250 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms