RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 MARK3P27448 753 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 PTPN4P29074 926 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 JAG1P78504 1218 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 MTM1Q13496 603 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 RCN2Q14257 317 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 LVRNQ6Q4G3 990 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 CLNKQ7Z7G1 428 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 HELQQ8TDG4 1101 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 SCG3Q8WXD2 468 aaKnown RBP12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 ZNF75CPQ92670 426 aaPredicted RBP12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 NGLY1Q96IV0 654 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 C8orf37Q96NL8 207 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 CCDC77Q9BR77 488 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 LXNQ9BS40 222 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 PI4K2AQ9BTU6 479 aa12.16□□□□□ -0.46
TM9SF2-201ENST00000376387 CFBP00751 764 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 ATP2B4P23634 1241 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 KLRC2P26717 231 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 PRELPP51888 382 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 CETN1Q12798 172 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 LBRQ14739 615 aaKnown RBP12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 TBC1D25Q3MII6 688 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 SNX30Q5VWJ9 437 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 GSTA5Q7RTV2 222 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 DCAF4Q8WV16 495 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 WDR60Q8WVS4 1066 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 SEL1LQ9UBV2 794 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 UBE4BO95155 1302 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 DDTLA6NHG4 134 aaPredicted RBP12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 PRPF4O43172 522 aaKnown RBP eCLIP12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 GAS7O60861 476 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 ATP9AO75110 1047 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 NDUFB10O96000 172 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 CFHP08603 1231 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 FAM200BP0CF97 657 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 ADRA1DP25100 572 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 PIK3CAP42336 1068 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 NOP14P78316 857 aaKnown RBP12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 CAV1Q03135 178 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 TSNAXIP1Q2TAA8 658 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 ATP13A4Q4VNC1 1196 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 C10orf62Q5T681 223 aaPredicted RBP12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 GRK7Q8WTQ7 553 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 KLF6Q99612 283 aaPredicted RBP12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 PPP1R12CQ9BZL4 782 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 DCLRE1BQ9H816 532 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 ZNF831Q5JPB2 1677 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 THSD7AQ9UPZ6 1657 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 CFAP69A5D8W1 941 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 GOLGA8RI6L899 631 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 TRAFD1O14545 582 aaPredicted RBP12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 TYROBPO43914 113 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 KRT10P13645 584 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 TPP2P29144 1249 aaPredicted RBP12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 ALDH3A1P30838 453 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 GAD2Q05329 585 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 PPP2R5CQ13362 524 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 SGSM1Q2NKQ1 1148 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 SYDE1Q6ZW31 735 aaPredicted RBP12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 STXBP4Q6ZWJ1 553 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 ZCCHC9Q8N567 271 aaKnown RBP12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 NACC1Q96RE7 527 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 SMC6Q96SB8 1091 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 TLE6Q9H808 572 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 FBXO6Q9NRD1 293 aaPredicted RBP12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 WDR35Q9P2L0 1181 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 USTQ9Y2C2 406 aa12.15□□□□□ -0.46
TM9SF2-201ENST00000376387 ARHGEF35A5YM69 484 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 PI4K2BG5E9Z4 385 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 GOLGA8SH3BPF8 625 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 GOLGA8MH3BSY2 632 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 TBX10O75333 385 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 FOSP01100 380 aaPredicted RBP12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 POTEJP0CG39 1038 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 KRT5P13647 590 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 POLE2P56282 527 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 CCDC6Q16204 474 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 CLEC16AQ2KHT3 1053 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 KAZNQ674X7 775 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 PADI6Q6TGC4 694 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 ANKMY2Q8IV38 441 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 KBTBD2Q8IY47 623 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 XXYLT1Q8NBI6 393 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 TAS1R2Q8TE23 839 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 PTPRN2Q92932 1015 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 IFT43Q96FT9 208 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 DDX50Q9BQ39 737 aaKnown RBP12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 VPS37BQ9H9H4 285 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 GPRC5CQ9NQ84 441 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 TCF4P15884 667 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 KRT4P19013 534 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 ROR2Q01974 943 aaKnown RBP12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 CMPK2Q5EBM0 449 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 RGS9BPQ6ZS82 235 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 ZC3H18Q86VM9 953 aaKnown RBP12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 CCNJLQ8IV13 435 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 TRIM42Q8IWZ5 723 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 GALNT15Q8N3T1 639 aa12.14□□□□□ -0.47
TM9SF2-201ENST00000376387 USP33Q8TEY7 942 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms