RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 DNA2P51530 1060 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 CENPCQ03188 943 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 ALKAL1Q6UXT8 129 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 RNF180Q86T96 592 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 NT5DC3Q86UY8 548 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 ZNF606Q8WXB4 792 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 CPA5Q8WXQ8 436 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 CYFIP2Q96F07 1278 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 ZMAT2Q96NC0 199 aaKnown RBP21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 RHOXF2Q9BQY4 288 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 APOL6Q9BWW8 343 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 ABCB6Q9NP58 842 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 CNTN3Q9P232 1028 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 GRIN2DO15399 1336 aa21.93■■□□□ 1.1
LYSMD2-201ENST00000267838 STAU1O95793 577 aaKnown RBP21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 P4HA1P13674 534 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 RAP1GAPP47736 663 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 MAP9Q49MG5 647 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 ZNF394Q53GI3 561 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 NAA35Q5VZE5 725 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 RPAINQ86UA6 219 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 MCOLN2Q8IZK6 566 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 AMFRQ9UKV5 643 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 AKAP5P24588 427 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 NSFP46459 744 aaKnown RBP21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 VSNL1P62760 191 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 NOMO3P69849 1222 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 ZBTB6Q15916 424 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 PTPROQ16827 1216 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 CCDC181Q5TID7 509 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 ZNF572Q7Z3I7 529 aaPredicted RBP21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 PASD1Q8IV76 773 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 TRIM11Q96F44 468 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 NUP85Q9BW27 656 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 SENP6Q9GZR1 1112 aaPredicted RBP21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 SDCBP2Q9H190 292 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 RNF14Q9UBS8 474 aa21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 CNOT8Q9UFF9 292 aaKnown RBP21.92■■□□□ 1.1
LYSMD2-201ENST00000267838 PDCD11Q14690 1871 aaKnown RBP21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 TARSL2A2RTX5 802 aaKnown RBP21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 FKTNO75072 461 aa21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 CHRNA1P02708 482 aa21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 CTSHP09668 335 aa21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 SSTR3P32745 418 aaPredicted RBP21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 PAFAH1B1P43034 410 aa21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 PTGISQ16647 500 aa21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 C11orf63Q6NUN7 778 aa21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 NOA1Q8NC60 698 aaKnown RBP21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 BEST2Q8NFU1 509 aa21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 SMYD3Q9H7B4 428 aa21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 CYP3A43Q9HB55 503 aa21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 UVRAGQ9P2Y5 699 aa21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 CHORDC1Q9UHD1 332 aaPredicted RBP21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 IPPQ9Y573 584 aa21.91■■□□□ 1.1
LYSMD2-201ENST00000267838 CES2O00748 559 aa21.9■■□□□ 1.1
LYSMD2-201ENST00000267838 RPS6KA5O75582 802 aa21.9■■□□□ 1.1
LYSMD2-201ENST00000267838 CABYRO75952 493 aa21.9■■□□□ 1.1
LYSMD2-201ENST00000267838 MYBL1P10243 752 aa21.9■■□□□ 1.1
LYSMD2-201ENST00000267838 BRD2P25440 801 aaKnown RBP21.9■■□□□ 1.1
LYSMD2-201ENST00000267838 CDH8P55286 799 aa21.9■■□□□ 1.1
LYSMD2-201ENST00000267838 MGAT3Q09327 533 aa21.9■■□□□ 1.1
LYSMD2-201ENST00000267838 TWF2Q6IBS0 349 aaKnown RBP21.9■■□□□ 1.1
LYSMD2-201ENST00000267838 PPP1R2P3Q6NXS1 205 aa21.9■■□□□ 1.1
LYSMD2-201ENST00000267838 ZNF564Q8TBZ8 553 aaPredicted RBP21.9■■□□□ 1.1
LYSMD2-201ENST00000267838 HES6Q96HZ4 224 aa21.9■■□□□ 1.1
LYSMD2-201ENST00000267838 PARP2Q9UGN5 583 aa21.9■■□□□ 1.1
LYSMD2-201ENST00000267838 H3BQF6 201 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 KCNK3O14649 394 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 INHAP05111 366 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 ACLYP53396 1101 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 MYO1EQ12965 1108 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 ARHGEF6Q15052 776 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 CFAP221Q4G0U5 840 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 GLRA4Q5JXX5 417 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 MON1BQ7L1V2 547 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 SMG8Q8ND04 991 aaKnown RBP21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 ZNF296Q8WUU4 475 aaPredicted RBP21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 MS4A14Q96JA4 679 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 PBKQ96KB5 322 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 ZSWIM1Q9BR11 485 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 RNF39Q9H2S5 420 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 VIPAS39Q9H9C1 493 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 AVENQ9NQS1 362 aaPredicted RBP21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 EHD2Q9NZN4 543 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 TUBGCP4Q9UGJ1 667 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 ST3GAL5Q9UNP4 418 aa21.89■■□□□ 1.1
LYSMD2-201ENST00000267838 TNNC1P63316 161 aa21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 ITIH3Q06033 890 aa21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 ITGA7Q13683 1181 aa21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 CASP8Q14790 479 aa21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 HSP90B2PQ58FF3 399 aa21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 XKR4Q5GH76 650 aa21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 PHF13Q86YI8 300 aaPredicted RBP21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 SLAIN1Q8ND83 568 aa21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 C18orf25Q96B23 403 aaPredicted RBP21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 TSPAN18Q96SJ8 248 aa21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 MED4Q9NPJ6 270 aa21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 SMARCAL1Q9NZC9 954 aa21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 KLK14Q9P0G3 267 aa21.89■■□□□ 1.09
LYSMD2-201ENST00000267838 UBQLN1Q9UMX0 589 aaKnown RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms