RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR35, Length 204 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR35snR35 SPG3Q04398 127 aaPredicted RBP1.97□□□□□ -2.09
snR35snR35 FUS2Q05670 677 aa1.97□□□□□ -2.09
snR35snR35 YOL160WQ08321 113 aa1.97□□□□□ -2.09
snR35snR35 PET9P18239 318 aaKnown RBP1.96□□□□□ -2.1
snR35snR35 SEC72P39742 193 aaKnown RBP1.96□□□□□ -2.1
snR35snR35 PDS1P40316 373 aaPredicted RBP1.96□□□□□ -2.1
snR35snR35 GVP36P40531 326 aaKnown RBP1.96□□□□□ -2.1
snR35snR35 DAN1P47178 298 aa1.96□□□□□ -2.1
snR35snR35 ARO80Q04052 950 aa1.96□□□□□ -2.1
snR35snR35 RIO1Q12196 484 aaKnown RBP1.96□□□□□ -2.1
snR35snR35 YDL085C-AQ3E7B7 68 aaKnown RBP1.96□□□□□ -2.1
snR35snR35 YFR032C-BQ8TGU2 87 aa1.96□□□□□ -2.1
snR35snR35 MBF1O14467 151 aaKnown RBP1.95□□□□□ -2.1
snR35snR35 SNF4P12904 322 aa1.95□□□□□ -2.1
snR35snR35 SKI6P46948 246 aaPredicted RBP1.95□□□□□ -2.1
snR35snR35 UBC12P52491 188 aa1.95□□□□□ -2.1
snR35snR35 YNL184CP53876 108 aa1.95□□□□□ -2.1
snR35snR35 HNT1Q04344 158 aaKnown RBP1.95□□□□□ -2.1
snR35snR35 FSF1Q12029 327 aaKnown RBP1.95□□□□□ -2.1
snR35snR35 IGO2Q9P305 131 aa1.95□□□□□ -2.1
snR35snR35 ATP15P21306 62 aa1.94□□□□□ -2.1
snR35snR35 YET1P35723 206 aa1.94□□□□□ -2.1
snR35snR35 SHE2P36068 246 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
snR35snR35 NRG2P38082 220 aa1.94□□□□□ -2.1
snR35snR35 YBR285WP38354 144 aa1.94□□□□□ -2.1
snR35snR35 POG1P40473 351 aa1.94□□□□□ -2.1
snR35snR35 TIR3P40552 269 aa1.94□□□□□ -2.1
snR35snR35 YJL027CP47063 138 aaPredicted RBP1.94□□□□□ -2.1
snR35snR35 NRK1P53915 240 aa1.94□□□□□ -2.1
snR35snR35 NOC4Q06512 552 aaPredicted RBP1.94□□□□□ -2.1
snR35snR35 YLR031WQ07978 186 aa1.94□□□□□ -2.1
snR35snR35 YLR036CQ07986 203 aa1.94□□□□□ -2.1
snR35snR35 YOL024WQ08172 172 aa1.94□□□□□ -2.1
snR35snR35 DDI2P0CH63 225 aa1.93□□□□□ -2.1
snR35snR35 DDI3P0CH64 225 aa1.93□□□□□ -2.1
snR35snR35 YCR090CP25654 182 aaKnown RBP1.93□□□□□ -2.1
snR35snR35 OCH1P31755 480 aa1.93□□□□□ -2.1
snR35snR35 YHR022CP38763 256 aa1.93□□□□□ -2.1
snR35snR35 AIM2P39721 246 aa1.93□□□□□ -2.1
snR35snR35 FCY21P40039 528 aa1.93□□□□□ -2.1
snR35snR35 BOL2P53082 120 aa1.93□□□□□ -2.1
snR35snR35 BOL1Q3E793 110 aa1.93□□□□□ -2.1
snR35snR35 ODC2Q99297 307 aa1.93□□□□□ -2.1
snR35snR35 TAH1P25638 111 aaPredicted RBP1.92□□□□□ -2.1
snR35snR35 VPS51P36116 164 aa1.92□□□□□ -2.1
snR35snR35 DSE2P38844 325 aa1.92□□□□□ -2.1
snR35snR35 YNL217WP40152 326 aa1.92□□□□□ -2.1
snR35snR35 FMP32P43557 207 aa1.92□□□□□ -2.1
snR35snR35 ARP3P47117 449 aaKnown RBP1.92□□□□□ -2.1
snR35snR35 ARO8P53090 500 aaKnown RBP1.92□□□□□ -2.1
snR35snR35 CYT2Q00873 224 aa1.92□□□□□ -2.1
snR35snR35 DYN3Q04949 312 aa1.92□□□□□ -2.1
snR35snR35 CMC2Q3E7A4 109 aa1.92□□□□□ -2.1
snR35snR35 ATG40Q99325 256 aa1.92□□□□□ -2.1
snR35snR35 RAS2P01120 322 aaKnown RBP1.91□□□□□ -2.1
snR35snR35 GCY1P14065 312 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
snR35snR35 TRR1P29509 319 aaKnown RBP1.91□□□□□ -2.1
snR35snR35 KDX1P36005 433 aa1.91□□□□□ -2.1
snR35snR35 FMP23P38231 175 aa1.91□□□□□ -2.1
snR35snR35 AYR1P40471 297 aa1.91□□□□□ -2.1
snR35snR35 AGE2P40529 298 aa1.91□□□□□ -2.1
snR35snR35 TMA22P47089 198 aaPredicted RBP1.91□□□□□ -2.1
snR35snR35 NUP49Q02199 472 aa1.91□□□□□ -2.1
snR35snR35 SNO1Q03144 224 aa1.91□□□□□ -2.1
snR35snR35 YMR315WQ04869 349 aaKnown RBP1.91□□□□□ -2.1
snR35snR35 GRX8Q05926 109 aa1.91□□□□□ -2.1
snR35snR35 YIL177CP40434 1758 aa1.9□□□□□ -2.1
snR35snR35 YJL225CP40889 1758 aa1.9□□□□□ -2.1
snR35snR35 CPA1P07258 411 aaKnown RBP1.9□□□□□ -2.11
snR35snR35 RPL35AP0CX84 120 aaKnown RBP1.9□□□□□ -2.11
snR35snR35 RPL35BP0CX85 120 aaKnown RBP1.9□□□□□ -2.11
snR35snR35 MDH2P22133 377 aa1.9□□□□□ -2.11
snR35snR35 MGT1P26188 188 aa1.9□□□□□ -2.11
snR35snR35 FZF1P32805 299 aa1.9□□□□□ -2.11
snR35snR35 OPY1P38271 328 aa1.9□□□□□ -2.11
snR35snR35 YEA4P40004 342 aa1.9□□□□□ -2.11
snR35snR35 VTC1P40046 129 aaRIP-Chip data1.9□□□□□ -2.11not detected
snR35snR35 YER134CP40081 178 aa1.9□□□□□ -2.11
snR35snR35 PEP8P40335 379 aa1.9□□□□□ -2.11
snR35snR35 SER2P42941 309 aa1.9□□□□□ -2.11
snR35snR35 TDA4P47153 279 aa1.9□□□□□ -2.11
snR35snR35 JAC1P53193 184 aa1.9□□□□□ -2.11
snR35snR35 YDR274CP87283 123 aa1.9□□□□□ -2.11
snR35snR35 GIM5Q04493 163 aa1.9□□□□□ -2.11
snR35snR35 DGA1Q08650 418 aa1.9□□□□□ -2.11
snR35snR35 TRX3P25372 127 aa1.89□□□□□ -2.11
snR35snR35 PAN3P36102 679 aaPredicted RBP1.89□□□□□ -2.11
snR35snR35 MAK5P38112 773 aaPredicted RBP1.89□□□□□ -2.11
snR35snR35 YBR209WP38311 105 aa1.89□□□□□ -2.11
snR35snR35 YER034WP40022 185 aaKnown RBP1.89□□□□□ -2.11
snR35snR35 YNR077CP53758 84 aa1.89□□□□□ -2.11
snR35snR35 PDR18P53756 1333 aa1.89□□□□□ -2.11
snR35snR35 CLG1P35190 452 aa1.88□□□□□ -2.11
snR35snR35 AVT2P39981 480 aa1.88□□□□□ -2.11
snR35snR35 EAF6P47128 113 aa1.88□□□□□ -2.11
snR35snR35 YJR111CP47148 283 aaKnown RBP1.88□□□□□ -2.11
snR35snR35 YIP3P53633 176 aa1.88□□□□□ -2.11
snR35snR35 YNL247WP53852 767 aaKnown RBP1.88□□□□□ -2.11
snR35snR35 PGA1P53896 198 aa1.88□□□□□ -2.11
snR35snR35 YLR460CP54007 376 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms