RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W SPS18P32572 300 aa1.34□□□□□ -2.19
BRO1YPL084W MGM101P32787 269 aaKnown RBP1.34□□□□□ -2.19
BRO1YPL084W YKE4P40544 346 aa1.34□□□□□ -2.19
BRO1YPL084W AIF1P52923 378 aa1.34□□□□□ -2.19
BRO1YPL084W CGR1P53188 120 aa1.34□□□□□ -2.19
BRO1YPL084W CUS2P53830 285 aaPredicted RBP1.34□□□□□ -2.19
BRO1YPL084W PET191Q02772 108 aa1.34□□□□□ -2.19
BRO1YPL084W ADF1Q2V2Q1 113 aa1.34□□□□□ -2.19
BRO1YPL084W TY1B-BRQ12193 1756 aa1.34□□□□□ -2.19
BRO1YPL084W TY1B-GR3Q12316 1755 aa1.34□□□□□ -2.19
BRO1YPL084W TY1B-ORQ92393 1755 aa1.34□□□□□ -2.19
BRO1YPL084W MATALPHA2P0CY08 210 aa1.34□□□□□ -2.2
BRO1YPL084W HMLALPHA2P0CY09 210 aa1.34□□□□□ -2.2
BRO1YPL084W MRPL28P36527 147 aa1.34□□□□□ -2.2
BRO1YPL084W RMD6P39975 231 aa1.34□□□□□ -2.2
BRO1YPL084W CYT2Q00873 224 aa1.34□□□□□ -2.2
BRO1YPL084W YMR226CQ05016 267 aaKnown RBP1.34□□□□□ -2.2
BRO1YPL084W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.34□□□□□ -2.2not detected
BRO1YPL084W TCA17P32613 152 aa1.33□□□□□ -2.2
BRO1YPL084W SKG1P36169 355 aa1.33□□□□□ -2.2
BRO1YPL084W YCR087C-AP37263 153 aa1.33□□□□□ -2.2
BRO1YPL084W YHR022CP38763 256 aa1.33□□□□□ -2.2
BRO1YPL084W RFC4P40339 323 aaKnown RBP1.33□□□□□ -2.2
BRO1YPL084W PGD1P40356 397 aa1.33□□□□□ -2.2
BRO1YPL084W YNR062CP53748 327 aa1.33□□□□□ -2.2
BRO1YPL084W NUP159P40477 1460 aa1.33□□□□□ -2.2
BRO1YPL084W MER1P16523 270 aa1.33□□□□□ -2.2
BRO1YPL084W PET9P18239 318 aaKnown RBP1.33□□□□□ -2.2
BRO1YPL084W MEI4P29467 408 aa1.33□□□□□ -2.2
BRO1YPL084W BMT5P40493 336 aa1.33□□□□□ -2.2
BRO1YPL084W ERG25P53045 309 aa1.33□□□□□ -2.2
BRO1YPL084W BOL1Q3E793 110 aa1.33□□□□□ -2.2
BRO1YPL084W CDC7P06243 507 aa1.32□□□□□ -2.2
BRO1YPL084W SEC4P07560 215 aaKnown RBP1.32□□□□□ -2.2
BRO1YPL084W PTM1P32857 523 aa1.32□□□□□ -2.2
BRO1YPL084W UTP30P36144 274 aaKnown RBP1.32□□□□□ -2.2
BRO1YPL084W AST2P39945 430 aaKnown RBP1.32□□□□□ -2.2
BRO1YPL084W RPL33BP41056 107 aaKnown RBP1.32□□□□□ -2.2
BRO1YPL084W GET4Q12125 312 aa1.32□□□□□ -2.2
BRO1YPL084W USB1Q12208 290 aaKnown RBP1.32□□□□□ -2.2
BRO1YPL084W SEC17P32602 292 aa1.32□□□□□ -2.2
BRO1YPL084W TRM5P38793 499 aa1.32□□□□□ -2.2
BRO1YPL084W TIR3P40552 269 aa1.32□□□□□ -2.2
BRO1YPL084W YGR050CP53231 118 aa1.32□□□□□ -2.2
BRO1YPL084W YOL160WQ08321 113 aa1.32□□□□□ -2.2
BRO1YPL084W YPL162CQ12042 273 aa1.32□□□□□ -2.2
BRO1YPL084W RPL25P04456 142 aaKnown RBP1.31□□□□□ -2.2
BRO1YPL084W DDI2P0CH63 225 aa1.31□□□□□ -2.2
BRO1YPL084W DDI3P0CH64 225 aa1.31□□□□□ -2.2
BRO1YPL084W MRPS28P21771 286 aa1.31□□□□□ -2.2
BRO1YPL084W MRPL17P36528 281 aa1.31□□□□□ -2.2
BRO1YPL084W AYR1P40471 297 aa1.31□□□□□ -2.2
BRO1YPL084W LSM7P53905 115 aaKnown RBP1.31□□□□□ -2.2
BRO1YPL084W SWP1Q02795 286 aa1.31□□□□□ -2.2
BRO1YPL084W MCP1Q12106 302 aa1.31□□□□□ -2.2
BRO1YPL084W TSC3Q3E790 80 aa1.31□□□□□ -2.2
BRO1YPL084W YCL012CQ8J0M4 134 aa1.31□□□□□ -2.2
BRO1YPL084W YFR032C-BQ8TGU2 87 aa1.31□□□□□ -2.2
BRO1YPL084W TIM9O74700 87 aa1.31□□□□□ -2.2
BRO1YPL084W KSS1P14681 368 aa1.31□□□□□ -2.2
BRO1YPL084W LSM4P40070 187 aaKnown RBP1.31□□□□□ -2.2
BRO1YPL084W ICE2P40499 491 aa1.31□□□□□ -2.2
BRO1YPL084W MRPS17Q03246 237 aaPredicted RBP1.31□□□□□ -2.2
BRO1YPL084W MDM32Q12171 622 aa1.31□□□□□ -2.2
BRO1YPL084W RPL27BP0C2H7 136 aaKnown RBP1.3□□□□□ -2.2
BRO1YPL084W DSE2P38844 325 aa1.3□□□□□ -2.2
BRO1YPL084W AGE2P40529 298 aa1.3□□□□□ -2.2
BRO1YPL084W NUP188P52593 1655 aaKnown RBP1.3□□□□□ -2.2
BRO1YPL084W BET1P22804 142 aa1.3□□□□□ -2.2
BRO1YPL084W VTC1P40046 129 aaRIP-Chip data1.3□□□□□ -2.2not detected
BRO1YPL084W PEP8P40335 379 aa1.3□□□□□ -2.2
BRO1YPL084W YRB2P40517 327 aa1.3□□□□□ -2.2
BRO1YPL084W EAF6P47128 113 aa1.3□□□□□ -2.2
BRO1YPL084W AIM25P47140 327 aa1.3□□□□□ -2.2
BRO1YPL084W BOL2P53082 120 aa1.3□□□□□ -2.2
BRO1YPL084W GET1P53192 235 aa1.3□□□□□ -2.2
BRO1YPL084W NOP19P53317 196 aaPredicted RBP1.3□□□□□ -2.2
BRO1YPL084W YDR249CQ03787 373 aa1.3□□□□□ -2.2
BRO1YPL084W YPR117WQ06116 2489 aa1.3□□□□□ -2.2
BRO1YPL084W YBT1P32386 1661 aa1.3□□□□□ -2.2
BRO1YPL084W BEM2P39960 2167 aaKnown RBP1.29□□□□□ -2.2
BRO1YPL084W JIP3O13555 125 aa1.29□□□□□ -2.2
BRO1YPL084W YNR077CP53758 84 aa1.29□□□□□ -2.2
BRO1YPL084W COG5P53951 403 aa1.29□□□□□ -2.2
BRO1YPL084W ABP140Q08641 628 aaKnown RBP1.29□□□□□ -2.2
BRO1YPL084W URA5P13298 226 aaKnown RBP1.29□□□□□ -2.2
BRO1YPL084W RAD9P14737 1309 aa1.29□□□□□ -2.2
BRO1YPL084W UMP1P38293 148 aa1.29□□□□□ -2.2
BRO1YPL084W YNL217WP40152 326 aa1.29□□□□□ -2.2
BRO1YPL084W YIL177CP40434 1758 aa1.29□□□□□ -2.2
BRO1YPL084W GVP36P40531 326 aaKnown RBP1.29□□□□□ -2.2
BRO1YPL084W YJL225CP40889 1758 aa1.29□□□□□ -2.2
BRO1YPL084W BAT2P47176 376 aaKnown RBP1.29□□□□□ -2.2
BRO1YPL084W DOC1P53068 250 aa1.29□□□□□ -2.2
BRO1YPL084W VTH1P40438 1549 aa1.28□□□□□ -2.2
BRO1YPL084W VTH2P40890 1549 aa1.28□□□□□ -2.2
BRO1YPL084W YSP2Q06681 1438 aa1.28□□□□□ -2.2
BRO1YPL084W RPB3P16370 318 aaKnown RBP1.28□□□□□ -2.2
BRO1YPL084W MDH2P22133 377 aa1.28□□□□□ -2.2
BRO1YPL084W YET1P35723 206 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms